EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000016168 (Gene tree)
Gene ID: 101960274
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 20922 bases
Position: chrJH393302.1:7396561-7417482
Accession: 101960274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000014476	zf-C2H2	PF00096.26	2.2e-20	1	2
ENSSTOP00000014476	zf-C2H2	PF00096.26	2.2e-20	2	2
ENSSTOP00000014476	zf-met	PF12874.7	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000016171	PRDM4-201	3706	XM_005322321	ENSSTOP00000014476	801 (aa)	XP_005322378	I3MR13

Gene Model

Click here to download ENSSTOG00000016168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000016168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000016168	PRDM4	100	96.754	ENSG00000110851	PRDM4	100	96.754	Homo_sapiens
ENSSTOG00000016168	PRDM4	100	96.633	ENSAMEG00000016174	PRDM4	100	96.633	Ailuropoda_melanoleuca
ENSSTOG00000016168	PRDM4	99	87.640	ENSAPLG00000009846	PRDM4	100	87.266	Anas_platyrhynchos
ENSSTOG00000016168	PRDM4	100	96.629	ENSANAG00000024800	PRDM4	100	96.629	Aotus_nancymaae
ENSSTOG00000016168	PRDM4	100	96.255	ENSBTAG00000012999	PRDM4	100	96.255	Bos_taurus
ENSSTOG00000016168	PRDM4	100	96.380	ENSCJAG00000015261	PRDM4	100	96.380	Callithrix_jacchus
ENSSTOG00000016168	PRDM4	100	96.879	ENSCAFG00000001788	PRDM4	100	96.879	Canis_familiaris
ENSSTOG00000016168	PRDM4	100	96.879	ENSCAFG00020004916	PRDM4	100	96.879	Canis_lupus_dingo
ENSSTOG00000016168	PRDM4	100	96.130	ENSCHIG00000019409	PRDM4	100	96.130	Capra_hircus
ENSSTOG00000016168	PRDM4	100	96.629	ENSTSYG00000009248	PRDM4	100	96.629	Carlito_syrichta
ENSSTOG00000016168	PRDM4	99	89.987	ENSCAPG00000013937	PRDM4	99	89.862	Cavia_aperea
ENSSTOG00000016168	PRDM4	99	89.441	ENSCPOG00000022385	PRDM4	100	89.317	Cavia_porcellus
ENSSTOG00000016168	PRDM4	100	96.754	ENSCCAG00000036033	PRDM4	100	96.754	Cebus_capucinus
ENSSTOG00000016168	PRDM4	100	96.380	ENSCATG00000044797	PRDM4	100	96.380	Cercocebus_atys
ENSSTOG00000016168	PRDM4	99	92.040	ENSCLAG00000007545	PRDM4	100	92.413	Chinchilla_lanigera
ENSSTOG00000016168	PRDM4	100	96.629	ENSCSAG00000002896	PRDM4	100	96.629	Chlorocebus_sabaeus
ENSSTOG00000016168	PRDM4	76	96.364	ENSCHOG00000001744	PRDM4	86	96.364	Choloepus_hoffmanni
ENSSTOG00000016168	PRDM4	99	87.829	ENSCPBG00000023187	PRDM4	100	87.829	Chrysemys_picta_bellii
ENSSTOG00000016168	PRDM4	100	96.504	ENSCANG00000021804	PRDM4	100	96.504	Colobus_angolensis_palliatus
ENSSTOG00000016168	PRDM4	99	92.786	ENSCGRG00001015102	-	100	92.413	Cricetulus_griseus_chok1gshd
ENSSTOG00000016168	PRDM4	96	92.774	ENSCGRG00000004044	-	100	92.387	Cricetulus_griseus_crigri
ENSSTOG00000016168	PRDM4	100	95.506	ENSDNOG00000032478	PRDM4	100	95.989	Dasypus_novemcinctus
ENSSTOG00000016168	PRDM4	99	81.179	ENSDORG00000015081	-	100	81.430	Dipodomys_ordii
ENSSTOG00000016168	PRDM4	93	45.927	ENSEBUG00000003775	prdm4	99	46.260	Eptatretus_burgeri
ENSSTOG00000016168	PRDM4	100	96.629	ENSECAG00000015423	PRDM4	100	96.717	Equus_caballus
ENSSTOG00000016168	PRDM4	94	92.943	ENSEEUG00000006569	PRDM4	99	92.543	Erinaceus_europaeus
ENSSTOG00000016168	PRDM4	95	61.697	ENSELUG00000015265	prdm4	93	62.338	Esox_lucius
ENSSTOG00000016168	PRDM4	100	97.129	ENSFCAG00000022478	PRDM4	100	97.129	Felis_catus
ENSSTOG00000016168	PRDM4	99	87.955	ENSFALG00000013342	PRDM4	100	87.578	Ficedula_albicollis
ENSSTOG00000016168	PRDM4	100	87.547	ENSGALG00000012619	PRDM4	100	87.173	Gallus_gallus
ENSSTOG00000016168	PRDM4	100	87.266	ENSGAGG00000002763	PRDM4	95	87.266	Gopherus_agassizii
ENSSTOG00000016168	PRDM4	99	96.867	ENSGGOG00000001244	PRDM4	99	96.867	Gorilla_gorilla
ENSSTOG00000016168	PRDM4	99	93.225	ENSHGLG00000004590	PRDM4	98	93.099	Heterocephalus_glaber_female
ENSSTOG00000016168	PRDM4	99	92.174	ENSHGLG00100007464	PRDM4	100	92.050	Heterocephalus_glaber_male
ENSSTOG00000016168	PRDM4	99	59.413	ENSIPUG00000024162	prdm4	93	61.699	Ictalurus_punctatus
ENSSTOG00000016168	PRDM4	81	93.243	ENSJJAG00000022448	-	94	93.243	Jaculus_jaculus
ENSSTOG00000016168	PRDM4	99	72.401	ENSLACG00000007452	PRDM4	99	72.896	Latimeria_chalumnae
ENSSTOG00000016168	PRDM4	78	41.689	ENSLOCG00000017092	prdm4	100	53.247	Lepisosteus_oculatus
ENSSTOG00000016168	PRDM4	98	96.701	ENSLAFG00000001483	PRDM4	100	96.701	Loxodonta_africana
ENSSTOG00000016168	PRDM4	100	96.754	ENSMFAG00000041862	PRDM4	100	96.754	Macaca_fascicularis
ENSSTOG00000016168	PRDM4	100	96.754	ENSMMUG00000015550	PRDM4	100	96.754	Macaca_mulatta
ENSSTOG00000016168	PRDM4	100	96.504	ENSMNEG00000032319	PRDM4	100	96.504	Macaca_nemestrina
ENSSTOG00000016168	PRDM4	100	96.629	ENSMLEG00000039607	PRDM4	100	96.629	Mandrillus_leucophaeus
ENSSTOG00000016168	PRDM4	99	80.125	ENSMGAG00000012815	PRDM4	100	79.750	Meleagris_gallopavo
ENSSTOG00000016168	PRDM4	100	96.005	ENSMICG00000007807	PRDM4	100	96.005	Microcebus_murinus
ENSSTOG00000016168	PRDM4	100	93.508	ENSMOCG00000000753	Prdm4	99	93.258	Microtus_ochrogaster
ENSSTOG00000016168	PRDM4	99	94.228	ENSMUSG00000035529	Prdm4	100	93.726	Mus_musculus
ENSSTOG00000016168	PRDM4	99	93.350	MGP_PahariEiJ_G0031398	Prdm4	100	93.393	Mus_pahari
ENSSTOG00000016168	PRDM4	99	94.730	MGP_SPRETEiJ_G0016505	Prdm4	100	94.790	Mus_spretus
ENSSTOG00000016168	PRDM4	100	90.559	ENSMPUG00000012238	PRDM4	100	89.814	Mustela_putorius_furo
ENSSTOG00000016168	PRDM4	100	96.629	ENSMLUG00000000767	PRDM4	100	96.629	Myotis_lucifugus
ENSSTOG00000016168	PRDM4	99	95.609	ENSNGAG00000018627	Prdm4	100	95.609	Nannospalax_galili
ENSSTOG00000016168	PRDM4	100	96.629	ENSNLEG00000006748	PRDM4	100	96.629	Nomascus_leucogenys
ENSSTOG00000016168	PRDM4	89	88.263	ENSMEUG00000004495	PRDM4	89	88.263	Notamacropus_eugenii
ENSSTOG00000016168	PRDM4	88	94.345	ENSOPRG00000010192	PRDM4	89	94.345	Ochotona_princeps
ENSSTOG00000016168	PRDM4	99	90.464	ENSODEG00000014750	PRDM4	99	90.715	Octodon_degus
ENSSTOG00000016168	PRDM4	100	90.262	ENSOANG00000005526	PRDM4	100	90.262	Ornithorhynchus_anatinus
ENSSTOG00000016168	PRDM4	93	96.853	ENSOCUG00000012859	PRDM4	96	96.853	Oryctolagus_cuniculus
ENSSTOG00000016168	PRDM4	99	97.240	ENSOGAG00000011945	PRDM4	100	97.240	Otolemur_garnettii
ENSSTOG00000016168	PRDM4	100	95.880	ENSOARG00000017955	PRDM4	100	95.880	Ovis_aries
ENSSTOG00000016168	PRDM4	100	96.754	ENSPPAG00000038438	PRDM4	100	96.754	Pan_paniscus
ENSSTOG00000016168	PRDM4	100	97.129	ENSPPRG00000004144	PRDM4	100	97.129	Panthera_pardus
ENSSTOG00000016168	PRDM4	100	97.129	ENSPTIG00000005847	PRDM4	100	97.129	Panthera_tigris_altaica
ENSSTOG00000016168	PRDM4	100	96.754	ENSPTRG00000005400	PRDM4	100	96.754	Pan_troglodytes
ENSSTOG00000016168	PRDM4	100	96.754	ENSPANG00000022084	PRDM4	100	96.754	Papio_anubis
ENSSTOG00000016168	PRDM4	99	59.572	ENSPKIG00000000875	prdm4	99	60.285	Paramormyrops_kingsleyae
ENSSTOG00000016168	PRDM4	88	88.398	ENSPSIG00000012066	PRDM4	100	88.398	Pelodiscus_sinensis
ENSSTOG00000016168	PRDM4	99	94.856	ENSPEMG00000014598	Prdm4	100	94.856	Peromyscus_maniculatus_bairdii
ENSSTOG00000016168	PRDM4	100	88.060	ENSPCIG00000009471	PRDM4	100	88.060	Phascolarctos_cinereus
ENSSTOG00000016168	PRDM4	100	96.629	ENSPPYG00000004913	PRDM4	100	96.629	Pongo_abelii
ENSSTOG00000016168	PRDM4	83	95.146	ENSPCAG00000009987	PRDM4	83	95.146	Procavia_capensis
ENSSTOG00000016168	PRDM4	100	96.005	ENSPCOG00000021060	PRDM4	100	96.005	Propithecus_coquereli
ENSSTOG00000016168	PRDM4	100	95.511	ENSPVAG00000001596	PRDM4	100	96.010	Pteropus_vampyrus
ENSSTOG00000016168	PRDM4	99	93.985	ENSRNOG00000004962	Prdm4	100	93.860	Rattus_norvegicus
ENSSTOG00000016168	PRDM4	100	96.504	ENSRBIG00000035488	PRDM4	100	96.504	Rhinopithecus_bieti
ENSSTOG00000016168	PRDM4	100	96.629	ENSRROG00000012779	PRDM4	100	96.629	Rhinopithecus_roxellana
ENSSTOG00000016168	PRDM4	100	96.629	ENSSBOG00000000403	PRDM4	100	96.629	Saimiri_boliviensis_boliviensis
ENSSTOG00000016168	PRDM4	99	63.300	ENSSFOG00015023358	prdm4	99	63.547	Scleropages_formosus
ENSSTOG00000016168	PRDM4	100	96.380	ENSSSCG00000000160	PRDM4	100	96.380	Sus_scrofa
ENSSTOG00000016168	PRDM4	100	88.015	ENSTGUG00000010962	-	100	87.640	Taeniopygia_guttata
ENSSTOG00000016168	PRDM4	73	90.273	ENSTBEG00000001732	PRDM4	84	90.273	Tupaia_belangeri
ENSSTOG00000016168	PRDM4	100	95.755	ENSTTRG00000011056	PRDM4	100	95.755	Tursiops_truncatus
ENSSTOG00000016168	PRDM4	100	97.004	ENSUAMG00000022796	PRDM4	100	97.004	Ursus_americanus
ENSSTOG00000016168	PRDM4	100	97.004	ENSUMAG00000017231	PRDM4	100	97.004	Ursus_maritimus
ENSSTOG00000016168	PRDM4	99	97.365	ENSVPAG00000002215	PRDM4	100	97.365	Vicugna_pacos
ENSSTOG00000016168	PRDM4	100	96.879	ENSVVUG00000023397	PRDM4	100	96.879	Vulpes_vulpes