EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000016249 (Gene tree)
Gene ID: 101970690
Gene Symbol: ZC3H4
Alias: -
Full Name: zinc finger CCCH-type containing 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 37479 bases
Position: chrJH393474.1:834684-872162
Accession: 17808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017512	zf-CCCH	PF00642.24	2.3e-13	1	1
ENSSTOP00000014551	zf-CCCH	PF00642.24	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000016253	ZC3H4-201	3555	XM_013363460	ENSSTOP00000014551	1184 (aa)	-	I3MR73
ENSSTOT00000021343	ZC3H4-202	3327	-	ENSSTOP00000017512	1108 (aa)	-	I3MZG6

Gene Model

Click here to download ENSSTOG00000016249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000016249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000016249	ZC3H4	79	33.241	ENSSTOG00000008120	-	63	46.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000016249	ZC3H4	83	88.583	ENSG00000130749	ZC3H4	87	97.330	Homo_sapiens
ENSSTOG00000016249	ZC3H4	96	71.571	ENSACAG00000003986	ZC3H4	87	69.825	Anolis_carolinensis
ENSSTOG00000016249	ZC3H4	83	95.642	ENSANAG00000023963	ZC3H4	95	86.879	Aotus_nancymaae
ENSSTOG00000016249	ZC3H4	70	83.333	ENSAMXG00000009037	zc3h4	69	58.289	Astyanax_mexicanus
ENSSTOG00000016249	ZC3H4	83	85.680	ENSBTAG00000009286	ZC3H4	89	93.932	Bos_taurus
ENSSTOG00000016249	ZC3H4	83	97.324	ENSCJAG00000011601	ZC3H4	87	97.324	Callithrix_jacchus
ENSSTOG00000016249	ZC3H4	98	88.889	ENSCAFG00000004182	ZC3H4	95	88.395	Canis_familiaris
ENSSTOG00000016249	ZC3H4	98	84.813	ENSCHIG00000013956	ZC3H4	96	86.079	Capra_hircus
ENSSTOG00000016249	ZC3H4	98	89.961	ENSTSYG00000000926	ZC3H4	98	87.053	Carlito_syrichta
ENSSTOG00000016249	ZC3H4	83	94.903	ENSCCAG00000037597	ZC3H4	88	95.906	Cebus_capucinus
ENSSTOG00000016249	ZC3H4	83	94.175	ENSCATG00000039046	ZC3H4	87	95.322	Cercocebus_atys
ENSSTOG00000016249	ZC3H4	100	93.170	ENSCLAG00000001032	ZC3H4	100	92.917	Chinchilla_lanigera
ENSSTOG00000016249	ZC3H4	83	87.864	ENSCSAG00000002989	ZC3H4	93	97.087	Chlorocebus_sabaeus
ENSSTOG00000016249	ZC3H4	87	73.154	ENSCPBG00000001719	ZC3H4	94	82.550	Chrysemys_picta_bellii
ENSSTOG00000016249	ZC3H4	62	91.304	ENSCGRG00001016116	Zc3h4	83	90.821	Cricetulus_griseus_chok1gshd
ENSSTOG00000016249	ZC3H4	83	95.134	ENSDNOG00000003764	ZC3H4	95	79.036	Dasypus_novemcinctus
ENSSTOG00000016249	ZC3H4	83	84.283	ENSDORG00000002726	Zc3h4	90	94.737	Dipodomys_ordii
ENSSTOG00000016249	ZC3H4	85	97.727	ENSETEG00000005763	ZC3H4	73	93.878	Echinops_telfairi
ENSSTOG00000016249	ZC3H4	100	90.682	ENSECAG00000024342	ZC3H4	92	96.491	Equus_caballus
ENSSTOG00000016249	ZC3H4	80	83.333	ENSEEUG00000000519	ZC3H4	76	93.103	Erinaceus_europaeus
ENSSTOG00000016249	ZC3H4	85	96.804	ENSFCAG00000004835	ZC3H4	89	94.404	Felis_catus
ENSSTOG00000016249	ZC3H4	82	69.976	ENSGAGG00000019319	ZC3H4	93	76.905	Gopherus_agassizii
ENSSTOG00000016249	ZC3H4	83	88.583	ENSGGOG00000013071	ZC3H4	87	97.330	Gorilla_gorilla
ENSSTOG00000016249	ZC3H4	97	88.780	ENSJJAG00000019068	Zc3h4	90	84.185	Jaculus_jaculus
ENSSTOG00000016249	ZC3H4	83	86.650	ENSLAFG00000001586	ZC3H4	89	95.388	Loxodonta_africana
ENSSTOG00000016249	ZC3H4	83	88.189	ENSMFAG00000041518	ZC3H4	87	96.845	Macaca_fascicularis
ENSSTOG00000016249	ZC3H4	83	88.583	ENSMLEG00000007946	ZC3H4	91	97.087	Mandrillus_leucophaeus
ENSSTOG00000016249	ZC3H4	99	93.721	ENSMAUG00000000068	Zc3h4	94	93.721	Mesocricetus_auratus
ENSSTOG00000016249	ZC3H4	83	97.080	ENSMICG00000008786	ZC3H4	89	97.080	Microcebus_murinus
ENSSTOG00000016249	ZC3H4	53	80.387	ENSMODG00000008978	ZC3H4	89	87.409	Monodelphis_domestica
ENSSTOG00000016249	ZC3H4	99	92.791	ENSMUSG00000059273	Zc3h4	94	92.791	Mus_musculus
ENSSTOG00000016249	ZC3H4	99	93.023	MGP_PahariEiJ_G0021089	Zc3h4	94	93.023	Mus_pahari
ENSSTOG00000016249	ZC3H4	99	92.326	MGP_SPRETEiJ_G0030312	Zc3h4	94	92.326	Mus_spretus
ENSSTOG00000016249	ZC3H4	98	91.181	ENSMPUG00000005065	ZC3H4	95	90.295	Mustela_putorius_furo
ENSSTOG00000016249	ZC3H4	98	86.811	ENSNGAG00000020090	Zc3h4	95	93.953	Nannospalax_galili
ENSSTOG00000016249	ZC3H4	76	91.925	ENSMEUG00000009167	ZC3H4	75	85.859	Notamacropus_eugenii
ENSSTOG00000016249	ZC3H4	78	94.891	ENSOPRG00000014889	ZC3H4	80	94.891	Ochotona_princeps
ENSSTOG00000016249	ZC3H4	83	86.837	ENSODEG00000008320	ZC3H4	100	81.186	Octodon_degus
ENSSTOG00000016249	ZC3H4	92	56.240	ENSOANG00000001794	ZC3H4	56	90.000	Ornithorhynchus_anatinus
ENSSTOG00000016249	ZC3H4	82	88.496	ENSOCUG00000026069	ZC3H4	76	96.341	Oryctolagus_cuniculus
ENSSTOG00000016249	ZC3H4	83	88.212	ENSOGAG00000031123	ZC3H4	87	96.602	Otolemur_garnettii
ENSSTOG00000016249	ZC3H4	83	78.398	ENSOARG00000010932	ZC3H4	86	95.455	Ovis_aries
ENSSTOG00000016249	ZC3H4	98	88.735	ENSPPRG00000023272	ZC3H4	95	88.458	Panthera_pardus
ENSSTOG00000016249	ZC3H4	83	95.385	ENSPTIG00000014229	ZC3H4	93	96.552	Panthera_tigris_altaica
ENSSTOG00000016249	ZC3H4	83	88.386	ENSPTRG00000011201	ZC3H4	87	97.330	Pan_troglodytes
ENSSTOG00000016249	ZC3H4	83	88.583	ENSPANG00000021115	ZC3H4	87	97.087	Papio_anubis
ENSSTOG00000016249	ZC3H4	97	60.111	ENSPSIG00000002241	ZC3H4	93	78.019	Pelodiscus_sinensis
ENSSTOG00000016249	ZC3H4	99	90.930	ENSPEMG00000009762	Zc3h4	94	93.488	Peromyscus_maniculatus_bairdii
ENSSTOG00000016249	ZC3H4	51	88.742	ENSPPYG00000010167	ZC3H4	50	88.020	Pongo_abelii
ENSSTOG00000016249	ZC3H4	64	95.652	ENSPCAG00000014919	ZC3H4	82	93.600	Procavia_capensis
ENSSTOG00000016249	ZC3H4	83	89.784	ENSPCOG00000017169	ZC3H4	87	97.087	Propithecus_coquereli
ENSSTOG00000016249	ZC3H4	78	92.330	ENSPVAG00000005687	ZC3H4	83	91.592	Pteropus_vampyrus
ENSSTOG00000016249	ZC3H4	99	95.681	ENSRBIG00000027984	ZC3H4	93	95.681	Rhinopithecus_bieti
ENSSTOG00000016249	ZC3H4	83	88.386	ENSRROG00000032920	ZC3H4	95	88.154	Rhinopithecus_roxellana
ENSSTOG00000016249	ZC3H4	98	92.710	ENSSBOG00000030914	ZC3H4	99	91.681	Saimiri_boliviensis_boliviensis
ENSSTOG00000016249	ZC3H4	86	87.597	ENSSARG00000014146	ZC3H4	72	92.647	Sorex_araneus