EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000016351 (Gene tree)
Gene ID: 101960245
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: U5 small nuclear ribonucleoprotein 200 kDa helicase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 26927 bases
Position: chrJH393554.1:366303-393229
Accession: 101960245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000014650	ResIII	PF04851.15	7.8e-26	1	2
ENSSTOP00000014650	ResIII	PF04851.15	7.8e-26	2	2
ENSSTOP00000014650	DEAD	PF00270.29	9.9e-52	1	2
ENSSTOP00000014650	DEAD	PF00270.29	9.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000016362	SNRNP200-201	6411	XM_005339579	ENSSTOP00000014650	2136 (aa)	XP_005339636	I3MRE8

Gene Model

Click here to download ENSSTOG00000016351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000016351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000016351	SNRNP200	86	41.271	ENSSTOG00000006645	ASCC3	80	43.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000016351	SNRNP200	100	99.860	ENSG00000144028	SNRNP200	100	99.860	Homo_sapiens
ENSSTOG00000016351	SNRNP200	99	90.982	ENSAPOG00000010223	snrnp200	99	90.871	Acanthochromis_polyacanthus
ENSSTOG00000016351	SNRNP200	100	99.813	ENSAMEG00000008996	SNRNP200	100	99.813	Ailuropoda_melanoleuca
ENSSTOG00000016351	SNRNP200	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSSTOG00000016351	SNRNP200	99	90.888	ENSAOCG00000024593	snrnp200	100	90.096	Amphiprion_ocellaris
ENSSTOG00000016351	SNRNP200	97	90.150	ENSAPEG00000012554	snrnp200	100	90.150	Amphiprion_percula
ENSSTOG00000016351	SNRNP200	99	90.747	ENSATEG00000022522	snrnp200	99	90.637	Anabas_testudineus
ENSSTOG00000016351	SNRNP200	99	97.690	ENSAPLG00000004313	SNRNP200	100	97.690	Anas_platyrhynchos
ENSSTOG00000016351	SNRNP200	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSSTOG00000016351	SNRNP200	100	95.289	ENSANAG00000036625	SNRNP200	100	95.709	Aotus_nancymaae
ENSSTOG00000016351	SNRNP200	99	90.512	ENSACLG00000011188	snrnp200	99	90.403	Astatotilapia_calliptera
ENSSTOG00000016351	SNRNP200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSSTOG00000016351	SNRNP200	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSSTOG00000016351	SNRNP200	100	99.813	ENSCJAG00000007514	SNRNP200	100	99.813	Callithrix_jacchus
ENSSTOG00000016351	SNRNP200	100	99.020	ENSCAFG00020019979	SNRNP200	100	99.825	Canis_lupus_dingo
ENSSTOG00000016351	SNRNP200	100	99.438	ENSCHIG00000020611	SNRNP200	100	99.438	Capra_hircus
ENSSTOG00000016351	SNRNP200	100	99.906	ENSTSYG00000010467	SNRNP200	100	99.906	Carlito_syrichta
ENSSTOG00000016351	SNRNP200	99	99.389	ENSCAPG00000017234	SNRNP200	99	99.389	Cavia_aperea
ENSSTOG00000016351	SNRNP200	100	99.672	ENSCPOG00000006776	SNRNP200	100	99.672	Cavia_porcellus
ENSSTOG00000016351	SNRNP200	100	99.813	ENSCCAG00000033962	SNRNP200	100	99.813	Cebus_capucinus
ENSSTOG00000016351	SNRNP200	100	99.860	ENSCATG00000015790	SNRNP200	100	99.860	Cercocebus_atys
ENSSTOG00000016351	SNRNP200	100	99.532	ENSCLAG00000004116	SNRNP200	100	99.532	Chinchilla_lanigera
ENSSTOG00000016351	SNRNP200	100	99.813	ENSCSAG00000017369	SNRNP200	100	99.813	Chlorocebus_sabaeus
ENSSTOG00000016351	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSSTOG00000016351	SNRNP200	100	97.756	ENSCPBG00000022571	SNRNP200	100	97.756	Chrysemys_picta_bellii
ENSSTOG00000016351	SNRNP200	99	76.506	ENSCING00000005082	-	99	76.646	Ciona_intestinalis
ENSSTOG00000016351	SNRNP200	100	94.348	ENSCANG00000033932	SNRNP200	100	99.801	Colobus_angolensis_palliatus
ENSSTOG00000016351	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSSTOG00000016351	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSSTOG00000016351	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSSTOG00000016351	SNRNP200	100	85.674	ENSCVAG00000017631	snrnp200	99	85.674	Cyprinodon_variegatus
ENSSTOG00000016351	SNRNP200	100	90.403	ENSDARG00000077536	snrnp200	99	90.403	Danio_rerio
ENSSTOG00000016351	SNRNP200	100	98.221	ENSDNOG00000011227	SNRNP200	100	98.221	Dasypus_novemcinctus
ENSSTOG00000016351	SNRNP200	100	97.101	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSSTOG00000016351	SNRNP200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSSTOG00000016351	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSSTOG00000016351	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSSTOG00000016351	SNRNP200	100	98.695	ENSEASG00005001884	SNRNP200	100	98.695	Equus_asinus_asinus
ENSSTOG00000016351	SNRNP200	100	99.813	ENSECAG00000019675	SNRNP200	100	99.813	Equus_caballus
ENSSTOG00000016351	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSSTOG00000016351	SNRNP200	99	90.888	ENSELUG00000018948	snrnp200	99	90.777	Esox_lucius
ENSSTOG00000016351	SNRNP200	100	99.860	ENSFCAG00000010699	SNRNP200	100	99.860	Felis_catus
ENSSTOG00000016351	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSSTOG00000016351	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSSTOG00000016351	SNRNP200	100	87.875	ENSFHEG00000003786	snrnp200	99	87.875	Fundulus_heteroclitus
ENSSTOG00000016351	SNRNP200	100	89.720	ENSGMOG00000004881	snrnp200	99	89.673	Gadus_morhua
ENSSTOG00000016351	SNRNP200	100	88.109	ENSGAFG00000010807	snrnp200	99	88.109	Gambusia_affinis
ENSSTOG00000016351	SNRNP200	100	90.051	ENSGACG00000011474	snrnp200	99	89.958	Gasterosteus_aculeatus
ENSSTOG00000016351	SNRNP200	95	97.686	ENSGAGG00000016069	SNRNP200	99	97.686	Gopherus_agassizii
ENSSTOG00000016351	SNRNP200	100	99.860	ENSGGOG00000005174	SNRNP200	100	99.860	Gorilla_gorilla
ENSSTOG00000016351	SNRNP200	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSSTOG00000016351	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSSTOG00000016351	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSSTOG00000016351	SNRNP200	100	99.625	ENSJJAG00000023659	Snrnp200	100	99.625	Jaculus_jaculus
ENSSTOG00000016351	SNRNP200	100	87.587	ENSKMAG00000003665	snrnp200	99	87.587	Kryptolebias_marmoratus
ENSSTOG00000016351	SNRNP200	100	90.309	ENSLBEG00000021585	snrnp200	99	90.309	Labrus_bergylta
ENSSTOG00000016351	SNRNP200	82	94.722	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSSTOG00000016351	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSSTOG00000016351	SNRNP200	100	99.532	ENSLAFG00000015626	SNRNP200	100	99.532	Loxodonta_africana
ENSSTOG00000016351	SNRNP200	100	99.813	ENSMFAG00000040174	SNRNP200	100	99.813	Macaca_fascicularis
ENSSTOG00000016351	SNRNP200	100	99.813	ENSMMUG00000023261	SNRNP200	100	99.813	Macaca_mulatta
ENSSTOG00000016351	SNRNP200	100	99.766	ENSMNEG00000032398	SNRNP200	100	99.766	Macaca_nemestrina
ENSSTOG00000016351	SNRNP200	100	99.860	ENSMLEG00000019083	SNRNP200	100	99.860	Mandrillus_leucophaeus
ENSSTOG00000016351	SNRNP200	100	90.220	ENSMAMG00000007851	snrnp200	99	90.173	Mastacembelus_armatus
ENSSTOG00000016351	SNRNP200	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSSTOG00000016351	SNRNP200	97	97.242	ENSMGAG00000001831	SNRNP200	100	97.242	Meleagris_gallopavo
ENSSTOG00000016351	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSSTOG00000016351	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSSTOG00000016351	SNRNP200	100	97.191	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSSTOG00000016351	SNRNP200	99	89.056	ENSMMOG00000014167	snrnp200	99	88.951	Mola_mola
ENSSTOG00000016351	SNRNP200	100	98.970	ENSMODG00000008475	SNRNP200	100	98.970	Monodelphis_domestica
ENSSTOG00000016351	SNRNP200	99	90.841	ENSMALG00000001973	snrnp200	99	90.730	Monopterus_albus
ENSSTOG00000016351	SNRNP200	100	99.579	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.579	Mus_caroli
ENSSTOG00000016351	SNRNP200	100	99.625	ENSMUSG00000003660	Snrnp200	100	99.625	Mus_musculus
ENSSTOG00000016351	SNRNP200	100	99.672	MGP_PahariEiJ_G0025695	Snrnp200	100	99.672	Mus_pahari
ENSSTOG00000016351	SNRNP200	100	99.625	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.625	Mus_spretus
ENSSTOG00000016351	SNRNP200	100	99.766	ENSMPUG00000008949	SNRNP200	100	99.766	Mustela_putorius_furo
ENSSTOG00000016351	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSSTOG00000016351	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSSTOG00000016351	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSSTOG00000016351	SNRNP200	90	90.319	ENSNBRG00000017960	snrnp200	98	90.319	Neolamprologus_brichardi
ENSSTOG00000016351	SNRNP200	100	95.212	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSSTOG00000016351	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSSTOG00000016351	SNRNP200	100	95.927	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSSTOG00000016351	SNRNP200	100	99.625	ENSODEG00000008366	SNRNP200	100	99.625	Octodon_degus
ENSSTOG00000016351	SNRNP200	99	90.465	ENSONIG00000010714	snrnp200	99	90.356	Oreochromis_niloticus
ENSSTOG00000016351	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSSTOG00000016351	SNRNP200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSSTOG00000016351	SNRNP200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSSTOG00000016351	SNRNP200	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSSTOG00000016351	SNRNP200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSSTOG00000016351	SNRNP200	100	99.906	ENSOGAG00000006879	SNRNP200	100	99.906	Otolemur_garnettii
ENSSTOG00000016351	SNRNP200	100	98.409	ENSOARG00000013949	SNRNP200	100	98.409	Ovis_aries
ENSSTOG00000016351	SNRNP200	100	99.860	ENSPPAG00000041559	SNRNP200	100	99.860	Pan_paniscus
ENSSTOG00000016351	SNRNP200	100	99.860	ENSPPRG00000004435	SNRNP200	100	99.860	Panthera_pardus
ENSSTOG00000016351	SNRNP200	100	99.391	ENSPTIG00000006380	SNRNP200	100	99.391	Panthera_tigris_altaica
ENSSTOG00000016351	SNRNP200	100	99.860	ENSPTRG00000012230	SNRNP200	100	99.860	Pan_troglodytes
ENSSTOG00000016351	SNRNP200	100	99.813	ENSPANG00000006017	SNRNP200	100	99.813	Papio_anubis
ENSSTOG00000016351	SNRNP200	100	91.199	ENSPKIG00000014762	snrnp200	99	91.199	Paramormyrops_kingsleyae
ENSSTOG00000016351	SNRNP200	100	96.724	ENSPSIG00000008580	SNRNP200	100	96.724	Pelodiscus_sinensis
ENSSTOG00000016351	SNRNP200	100	98.970	ENSPCIG00000023050	SNRNP200	100	98.970	Phascolarctos_cinereus
ENSSTOG00000016351	SNRNP200	100	90.454	ENSPFOG00000015110	snrnp200	99	90.454	Poecilia_formosa
ENSSTOG00000016351	SNRNP200	97	90.275	ENSPLAG00000006711	snrnp200	99	90.275	Poecilia_latipinna
ENSSTOG00000016351	SNRNP200	97	90.220	ENSPMEG00000021166	snrnp200	99	90.220	Poecilia_mexicana
ENSSTOG00000016351	SNRNP200	100	90.543	ENSPREG00000008875	snrnp200	99	90.543	Poecilia_reticulata
ENSSTOG00000016351	SNRNP200	100	99.860	ENSPPYG00000012068	SNRNP200	100	99.860	Pongo_abelii
ENSSTOG00000016351	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSSTOG00000016351	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSSTOG00000016351	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSSTOG00000016351	SNRNP200	99	85.995	ENSPNYG00000017476	snrnp200	99	85.901	Pundamilia_nyererei
ENSSTOG00000016351	SNRNP200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSSTOG00000016351	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSSTOG00000016351	SNRNP200	100	99.860	ENSRBIG00000044690	-	100	99.860	Rhinopithecus_bieti
ENSSTOG00000016351	SNRNP200	100	99.860	ENSRROG00000037952	-	100	99.860	Rhinopithecus_roxellana
ENSSTOG00000016351	SNRNP200	100	99.813	ENSSBOG00000035471	SNRNP200	100	99.813	Saimiri_boliviensis_boliviensis
ENSSTOG00000016351	SNRNP200	97	98.887	ENSSHAG00000000758	SNRNP200	100	98.887	Sarcophilus_harrisii
ENSSTOG00000016351	SNRNP200	99	91.686	ENSSFOG00015018826	snrnp200	99	91.573	Scleropages_formosus
ENSSTOG00000016351	SNRNP200	99	90.512	ENSSMAG00000005463	snrnp200	99	90.403	Scophthalmus_maximus
ENSSTOG00000016351	SNRNP200	99	90.841	ENSSDUG00000021410	snrnp200	99	90.730	Seriola_dumerili
ENSSTOG00000016351	SNRNP200	99	90.700	ENSSLDG00000010884	snrnp200	99	90.590	Seriola_lalandi_dorsalis
ENSSTOG00000016351	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSSTOG00000016351	SNRNP200	100	97.519	ENSSPUG00000003726	-	100	97.519	Sphenodon_punctatus
ENSSTOG00000016351	SNRNP200	99	90.888	ENSSPAG00000001842	snrnp200	99	90.777	Stegastes_partitus
ENSSTOG00000016351	SNRNP200	100	99.672	ENSSSCG00000008127	SNRNP200	100	99.672	Sus_scrofa
ENSSTOG00000016351	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSSTOG00000016351	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSSTOG00000016351	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	85.992	Tetraodon_nigroviridis
ENSSTOG00000016351	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSSTOG00000016351	SNRNP200	100	99.485	ENSTTRG00000004983	SNRNP200	100	99.485	Tursiops_truncatus
ENSSTOG00000016351	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSSTOG00000016351	SNRNP200	100	99.860	ENSUMAG00000012385	SNRNP200	100	99.860	Ursus_maritimus
ENSSTOG00000016351	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSSTOG00000016351	SNRNP200	100	99.626	ENSVVUG00000026247	SNRNP200	100	99.626	Vulpes_vulpes
ENSSTOG00000016351	SNRNP200	100	94.296	ENSXETG00000001243	snrnp200	100	94.296	Xenopus_tropicalis
ENSSTOG00000016351	SNRNP200	97	90.525	ENSXMAG00000002058	snrnp200	98	90.525	Xiphophorus_maculatus