EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000016570 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 2381 bases
Position: chrJH393404.1:5399262-5401642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017703	RRM_1	PF00076.22	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027170	-	549	-	ENSSTOP00000017703	182 (aa)	-	I3N007

Gene Model

Click here to download ENSSTOG00000016570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000016570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000016570	-	99	56.716	ENSAPOG00000000183	-	79	57.214	Acanthochromis_polyacanthus
ENSSTOG00000016570	-	98	57.353	ENSACIG00000006351	alyref	73	61.165	Amphilophus_citrinellus
ENSSTOG00000016570	-	99	47.926	ENSACIG00000020351	-	83	47.945	Amphilophus_citrinellus
ENSSTOG00000016570	-	99	57.214	ENSAOCG00000019305	-	79	56.345	Amphiprion_ocellaris
ENSSTOG00000016570	-	92	63.021	ENSAOCG00000014012	alyref	74	65.517	Amphiprion_ocellaris
ENSSTOG00000016570	-	92	63.021	ENSAPEG00000014603	alyref	74	65.517	Amphiprion_percula
ENSSTOG00000016570	-	99	57.214	ENSAPEG00000013527	-	79	56.345	Amphiprion_percula
ENSSTOG00000016570	-	92	60.714	ENSATEG00000004307	alyref	74	63.285	Anabas_testudineus
ENSSTOG00000016570	-	99	54.412	ENSATEG00000000382	-	77	56.281	Anabas_testudineus
ENSSTOG00000016570	-	66	69.630	ENSAPLG00000014745	-	100	70.290	Anas_platyrhynchos
ENSSTOG00000016570	-	100	58.373	ENSACLG00000008432	alyref	75	63.462	Astatotilapia_calliptera
ENSSTOG00000016570	-	99	47.059	ENSACLG00000010184	-	79	53.521	Astatotilapia_calliptera
ENSSTOG00000016570	-	99	62.802	ENSAMXG00000007359	alyref	73	62.500	Astyanax_mexicanus
ENSSTOG00000016570	-	90	49.198	ENSCING00000013568	-	77	45.226	Ciona_intestinalis
ENSSTOG00000016570	-	90	52.273	ENSCSAVG00000003324	-	78	48.705	Ciona_savignyi
ENSSTOG00000016570	-	92	63.021	ENSCSEG00000017800	alyref	75	65.025	Cynoglossus_semilaevis
ENSSTOG00000016570	-	92	63.492	ENSCVAG00000014869	alyref	74	64.500	Cyprinodon_variegatus
ENSSTOG00000016570	-	99	54.255	ENSCVAG00000007789	-	76	53.191	Cyprinodon_variegatus
ENSSTOG00000016570	-	98	65.366	ENSDARG00000077732	alyref	72	64.216	Danio_rerio
ENSSTOG00000016570	-	84	49.143	FBgn0010774	Ref1	74	41.117	Drosophila_melanogaster
ENSSTOG00000016570	-	96	57.692	ENSEBUG00000008253	alyref	68	57.923	Eptatretus_burgeri
ENSSTOG00000016570	-	92	49.451	ENSEBUG00000006305	alyref	86	43.137	Eptatretus_burgeri
ENSSTOG00000016570	-	97	65.482	ENSELUG00000017178	alyref	73	66.162	Esox_lucius
ENSSTOG00000016570	-	99	53.670	ENSELUG00000008849	-	81	56.682	Esox_lucius
ENSSTOG00000016570	-	79	74.684	ENSFALG00000011923	-	94	74.172	Ficedula_albicollis
ENSSTOG00000016570	-	92	63.978	ENSFHEG00000019426	alyref	73	65.990	Fundulus_heteroclitus
ENSSTOG00000016570	-	99	52.083	ENSFHEG00000004698	-	77	51.813	Fundulus_heteroclitus
ENSSTOG00000016570	-	90	55.319	ENSGMOG00000013122	-	100	52.041	Gadus_morhua
ENSSTOG00000016570	-	92	66.667	ENSGAFG00000006014	alyref	72	66.837	Gambusia_affinis
ENSSTOG00000016570	-	99	51.852	ENSGAFG00000007573	-	76	50.000	Gambusia_affinis
ENSSTOG00000016570	-	100	58.373	ENSHBUG00000020196	alyref	75	63.462	Haplochromis_burtoni
ENSSTOG00000016570	-	99	46.637	ENSHBUG00000001454	-	79	53.488	Haplochromis_burtoni
ENSSTOG00000016570	-	96	49.505	ENSHCOG00000012825	-	76	49.500	Hippocampus_comes
ENSSTOG00000016570	-	98	71.503	ENSIPUG00000009469	alyref	71	71.354	Ictalurus_punctatus
ENSSTOG00000016570	-	99	55.789	ENSKMAG00000006462	-	77	54.211	Kryptolebias_marmoratus
ENSSTOG00000016570	-	99	65.049	ENSKMAG00000008912	alyref	73	65.025	Kryptolebias_marmoratus
ENSSTOG00000016570	-	92	60.209	ENSLBEG00000023118	alyref	68	64.362	Labrus_bergylta
ENSSTOG00000016570	-	91	51.913	ENSLBEG00000012930	-	77	52.261	Labrus_bergylta
ENSSTOG00000016570	-	77	72.611	ENSLOCG00000013879	alyref	65	71.975	Lepisosteus_oculatus
ENSSTOG00000016570	-	92	63.402	ENSMAMG00000003034	alyref	75	64.706	Mastacembelus_armatus
ENSSTOG00000016570	-	99	54.774	ENSMAMG00000005464	-	78	53.769	Mastacembelus_armatus
ENSSTOG00000016570	-	100	58.373	ENSMZEG00005008639	alyref	75	63.462	Maylandia_zebra
ENSSTOG00000016570	-	99	53.810	ENSMZEG00005012096	-	79	53.991	Maylandia_zebra
ENSSTOG00000016570	-	91	68.449	ENSMMOG00000012458	alyref	71	68.020	Mola_mola
ENSSTOG00000016570	-	97	54.348	ENSMMOG00000007032	-	76	56.000	Mola_mola
ENSSTOG00000016570	-	99	49.761	ENSMALG00000006054	-	79	48.571	Monopterus_albus
ENSSTOG00000016570	-	90	63.953	ENSMLUG00000030671	-	66	60.795	Myotis_lucifugus
ENSSTOG00000016570	-	92	68.362	ENSMLUG00000014372	-	67	70.056	Myotis_lucifugus
ENSSTOG00000016570	-	92	71.751	ENSMLUG00000004098	-	69	68.362	Myotis_lucifugus
ENSSTOG00000016570	-	92	66.102	ENSMLUG00000006521	-	68	68.927	Myotis_lucifugus
ENSSTOG00000016570	-	90	63.687	ENSMLUG00000028605	-	65	59.777	Myotis_lucifugus
ENSSTOG00000016570	-	90	61.957	ENSMLUG00000009247	-	69	57.923	Myotis_lucifugus
ENSSTOG00000016570	-	90	64.407	ENSMLUG00000022178	-	67	59.218	Myotis_lucifugus
ENSSTOG00000016570	-	90	56.452	ENSMLUG00000022467	-	67	55.914	Myotis_lucifugus
ENSSTOG00000016570	-	92	89.412	ENSNGAG00000022014	-	84	85.083	Nannospalax_galili
ENSSTOG00000016570	-	99	47.982	ENSNBRG00000017460	-	79	53.555	Neolamprologus_brichardi
ENSSTOG00000016570	-	100	58.373	ENSNBRG00000001747	alyref	75	63.462	Neolamprologus_brichardi
ENSSTOG00000016570	-	100	60.377	ENSONIG00000019434	alyref	75	63.981	Oreochromis_niloticus
ENSSTOG00000016570	-	99	49.091	ENSONIG00000003296	-	78	55.122	Oreochromis_niloticus
ENSSTOG00000016570	-	99	50.739	ENSORLG00020015673	-	78	48.780	Oryzias_latipes_hni
ENSSTOG00000016570	-	92	62.434	ENSORLG00020011942	alyref	73	65.327	Oryzias_latipes_hni
ENSSTOG00000016570	-	92	62.434	ENSORLG00015022664	alyref	74	65.327	Oryzias_latipes_hsok
ENSSTOG00000016570	-	99	51.220	ENSORLG00015015143	-	78	50.244	Oryzias_latipes_hsok
ENSSTOG00000016570	-	92	65.426	ENSOMEG00000019176	alyref	74	64.141	Oryzias_melastigma
ENSSTOG00000016570	-	97	49.254	ENSOMEG00000007158	-	76	49.490	Oryzias_melastigma
ENSSTOG00000016570	-	91	78.531	ENSPPAG00000036403	-	69	77.401	Pan_paniscus
ENSSTOG00000016570	-	92	70.391	ENSPKIG00000007070	alyref	72	68.280	Paramormyrops_kingsleyae
ENSSTOG00000016570	-	97	65.816	ENSPKIG00000006233	-	61	64.141	Paramormyrops_kingsleyae
ENSSTOG00000016570	-	91	63.636	ENSPMGG00000016600	alyref	68	63.000	Periophthalmus_magnuspinnatus
ENSSTOG00000016570	-	65	60.317	ENSPMGG00000012994	-	64	62.931	Periophthalmus_magnuspinnatus
ENSSTOG00000016570	-	95	88.571	ENSPEMG00000016628	-	82	88.571	Peromyscus_maniculatus_bairdii
ENSSTOG00000016570	-	92	62.567	ENSPFOG00000022825	alyref	72	65.482	Poecilia_formosa
ENSSTOG00000016570	-	99	52.332	ENSPFOG00000017094	-	77	50.777	Poecilia_formosa
ENSSTOG00000016570	-	99	52.332	ENSPLAG00000014380	-	77	50.777	Poecilia_latipinna
ENSSTOG00000016570	-	92	62.567	ENSPLAG00000006948	alyref	73	65.482	Poecilia_latipinna
ENSSTOG00000016570	-	99	52.332	ENSPMEG00000023039	-	77	50.777	Poecilia_mexicana
ENSSTOG00000016570	-	92	62.567	ENSPMEG00000003547	alyref	72	65.482	Poecilia_mexicana
ENSSTOG00000016570	-	92	63.102	ENSPREG00000015795	alyref	73	65.990	Poecilia_reticulata
ENSSTOG00000016570	-	99	49.246	ENSPREG00000003649	-	77	50.254	Poecilia_reticulata
ENSSTOG00000016570	-	100	58.373	ENSPNYG00000017498	alyref	75	63.462	Pundamilia_nyererei
ENSSTOG00000016570	-	97	46.411	ENSPNYG00000002879	-	77	50.718	Pundamilia_nyererei
ENSSTOG00000016570	-	98	63.000	ENSPNAG00000002531	alyref	72	65.000	Pygocentrus_nattereri
ENSSTOG00000016570	-	92	79.775	ENSSBOG00000030924	-	84	78.652	Saimiri_boliviensis_boliviensis
ENSSTOG00000016570	-	91	66.286	ENSSHAG00000012866	-	69	60.345	Sarcophilus_harrisii
ENSSTOG00000016570	-	98	65.405	ENSSHAG00000000609	-	83	60.215	Sarcophilus_harrisii
ENSSTOG00000016570	-	91	72.826	ENSSFOG00015003678	alyref	84	67.935	Scleropages_formosus
ENSSTOG00000016570	-	98	72.396	ENSSFOG00015003923	alyref	75	71.875	Scleropages_formosus
ENSSTOG00000016570	-	92	61.257	ENSSMAG00000009283	alyref	73	64.677	Scophthalmus_maximus
ENSSTOG00000016570	-	92	51.232	ENSSMAG00000011169	-	79	51.429	Scophthalmus_maximus
ENSSTOG00000016570	-	92	62.500	ENSSDUG00000016158	alyref	74	65.025	Seriola_dumerili
ENSSTOG00000016570	-	92	60.825	ENSSLDG00000017803	alyref	74	64.216	Seriola_lalandi_dorsalis
ENSSTOG00000016570	-	98	57.286	ENSSPAG00000017028	-	76	57.789	Stegastes_partitus
ENSSTOG00000016570	-	99	52.709	ENSTRUG00000003051	-	79	53.922	Takifugu_rubripes
ENSSTOG00000016570	-	92	65.128	ENSTNIG00000011595	alyref	84	61.463	Tetraodon_nigroviridis
ENSSTOG00000016570	-	92	57.627	ENSTNIG00000014136	-	73	53.488	Tetraodon_nigroviridis
ENSSTOG00000016570	-	94	80.220	ENSVVUG00000000272	-	84	79.121	Vulpes_vulpes
ENSSTOG00000016570	-	91	65.574	ENSXCOG00000018047	alyref	72	64.796	Xiphophorus_couchianus
ENSSTOG00000016570	-	91	65.574	ENSXMAG00000012218	alyref	72	64.796	Xiphophorus_maculatus
ENSSTOG00000016570	-	99	53.125	ENSXMAG00000018086	-	76	53.125	Xiphophorus_maculatus