EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000019366 (Gene tree)
Gene ID: 101975063
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 318766 bases
Position: chrJH393440.1:3110843-3429608
Accession: 101975063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000018633	CMS1	PF14617.6	6.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000026381	CMSS1-201	837	XM_005335065	ENSSTOP00000018633	278 (aa)	XP_005335122	I3N2N7

Gene Model

Click here to download ENSSTOG00000019366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000019366's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000019366	CMSS1	100	89.606	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSSTOG00000019366	CMSS1	73	62.871	ENSAPOG00000010604	cmss1	99	56.680	Acanthochromis_polyacanthus
ENSSTOG00000019366	CMSS1	92	90.734	ENSAMEG00000004092	CMSS1	100	90.734	Ailuropoda_melanoleuca
ENSSTOG00000019366	CMSS1	73	53.465	ENSACIG00000021854	cmss1	91	50.000	Amphilophus_citrinellus
ENSSTOG00000019366	CMSS1	100	50.680	ENSAOCG00000013361	cmss1	100	52.349	Amphiprion_ocellaris
ENSSTOG00000019366	CMSS1	73	62.871	ENSAPEG00000005829	cmss1	100	51.839	Amphiprion_percula
ENSSTOG00000019366	CMSS1	100	52.381	ENSATEG00000008209	cmss1	100	53.952	Anabas_testudineus
ENSSTOG00000019366	CMSS1	82	68.261	ENSAPLG00000010542	CMSS1	100	68.261	Anas_platyrhynchos
ENSSTOG00000019366	CMSS1	96	62.500	ENSACAG00000011065	CMSS1	97	63.910	Anolis_carolinensis
ENSSTOG00000019366	CMSS1	100	88.571	ENSANAG00000023565	CMSS1	100	88.571	Aotus_nancymaae
ENSSTOG00000019366	CMSS1	100	48.829	ENSACLG00000027294	cmss1	100	51.014	Astatotilapia_calliptera
ENSSTOG00000019366	CMSS1	100	46.667	ENSAMXG00000002046	cmss1	100	46.885	Astyanax_mexicanus
ENSSTOG00000019366	CMSS1	100	88.172	ENSBTAG00000013663	CMSS1	100	90.323	Bos_taurus
ENSSTOG00000019366	CMSS1	100	89.643	ENSCJAG00000000610	CMSS1	100	89.643	Callithrix_jacchus
ENSSTOG00000019366	CMSS1	92	92.636	ENSCAFG00000009230	CMSS1	93	92.636	Canis_familiaris
ENSSTOG00000019366	CMSS1	83	84.979	ENSCAFG00020024156	-	77	81.301	Canis_lupus_dingo
ENSSTOG00000019366	CMSS1	93	92.278	ENSCAFG00020009464	-	95	92.278	Canis_lupus_dingo
ENSSTOG00000019366	CMSS1	92	91.051	ENSCHIG00000013003	CMSS1	93	91.051	Capra_hircus
ENSSTOG00000019366	CMSS1	92	87.549	ENSTSYG00000009266	CMSS1	99	87.549	Carlito_syrichta
ENSSTOG00000019366	CMSS1	80	72.052	ENSCAPG00000013584	CMSS1	100	71.616	Cavia_aperea
ENSSTOG00000019366	CMSS1	100	86.380	ENSCPOG00000014680	CMSS1	100	86.380	Cavia_porcellus
ENSSTOG00000019366	CMSS1	100	89.643	ENSCCAG00000034685	CMSS1	100	89.643	Cebus_capucinus
ENSSTOG00000019366	CMSS1	100	89.964	ENSCATG00000031980	CMSS1	100	89.964	Cercocebus_atys
ENSSTOG00000019366	CMSS1	82	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSSTOG00000019366	CMSS1	88	91.803	ENSCSAG00000006024	CMSS1	99	91.803	Chlorocebus_sabaeus
ENSSTOG00000019366	CMSS1	100	68.705	ENSCHOG00000012098	CMSS1	100	68.705	Choloepus_hoffmanni
ENSSTOG00000019366	CMSS1	70	39.500	ENSCING00000014848	-	100	40.642	Ciona_intestinalis
ENSSTOG00000019366	CMSS1	100	89.606	ENSCANG00000031337	CMSS1	100	89.606	Colobus_angolensis_palliatus
ENSSTOG00000019366	CMSS1	100	81.004	ENSCGRG00001014305	Cmss1	100	81.004	Cricetulus_griseus_chok1gshd
ENSSTOG00000019366	CMSS1	92	82.031	ENSCGRG00000006722	Cmss1	99	81.250	Cricetulus_griseus_crigri
ENSSTOG00000019366	CMSS1	100	49.495	ENSCSEG00000004958	cmss1	100	51.852	Cynoglossus_semilaevis
ENSSTOG00000019366	CMSS1	100	50.000	ENSCVAG00000005039	cmss1	100	51.724	Cyprinodon_variegatus
ENSSTOG00000019366	CMSS1	100	46.284	ENSDARG00000112579	cmss1	100	47.119	Danio_rerio
ENSSTOG00000019366	CMSS1	94	85.932	ENSDNOG00000040418	CMSS1	92	86.873	Dasypus_novemcinctus
ENSSTOG00000019366	CMSS1	100	88.530	ENSDORG00000010461	Cmss1	100	88.530	Dipodomys_ordii
ENSSTOG00000019366	CMSS1	96	81.343	ENSEASG00005010966	CMSS1	99	93.151	Equus_asinus_asinus
ENSSTOG00000019366	CMSS1	95	88.302	ENSECAG00000015662	CMSS1	99	91.150	Equus_caballus
ENSSTOG00000019366	CMSS1	100	55.197	ENSEEUG00000007624	-	100	55.556	Erinaceus_europaeus
ENSSTOG00000019366	CMSS1	100	50.166	ENSELUG00000019459	cmss1	100	52.667	Esox_lucius
ENSSTOG00000019366	CMSS1	100	93.190	ENSFCAG00000044577	CMSS1	100	93.190	Felis_catus
ENSSTOG00000019366	CMSS1	85	63.713	ENSFALG00000005816	CMSS1	100	63.713	Ficedula_albicollis
ENSSTOG00000019366	CMSS1	82	91.228	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSSTOG00000019366	CMSS1	82	59.307	ENSFHEG00000012008	cmss1	95	59.307	Fundulus_heteroclitus
ENSSTOG00000019366	CMSS1	99	51.773	ENSGMOG00000016729	cmss1	100	53.571	Gadus_morhua
ENSSTOG00000019366	CMSS1	96	62.406	ENSGALG00000015267	CMSS1	100	63.218	Gallus_gallus
ENSSTOG00000019366	CMSS1	74	64.251	ENSGAFG00000021217	cmss1	77	64.356	Gambusia_affinis
ENSSTOG00000019366	CMSS1	99	47.535	ENSGACG00000002798	cmss1	100	48.239	Gasterosteus_aculeatus
ENSSTOG00000019366	CMSS1	92	65.789	ENSGAGG00000019861	CMSS1	99	65.789	Gopherus_agassizii
ENSSTOG00000019366	CMSS1	92	90.310	ENSGGOG00000014125	CMSS1	99	90.310	Gorilla_gorilla
ENSSTOG00000019366	CMSS1	100	48.993	ENSHBUG00000008431	cmss1	100	50.847	Haplochromis_burtoni
ENSSTOG00000019366	CMSS1	90	87.200	ENSHGLG00000019481	CMSS1	99	87.200	Heterocephalus_glaber_female
ENSSTOG00000019366	CMSS1	92	86.381	ENSHGLG00100010314	CMSS1	100	86.381	Heterocephalus_glaber_male
ENSSTOG00000019366	CMSS1	100	52.159	ENSHCOG00000003222	cmss1	100	53.156	Hippocampus_comes
ENSSTOG00000019366	CMSS1	100	49.147	ENSIPUG00000011591	cmss1	100	48.966	Ictalurus_punctatus
ENSSTOG00000019366	CMSS1	100	85.305	ENSJJAG00000014894	Cmss1	100	85.305	Jaculus_jaculus
ENSSTOG00000019366	CMSS1	73	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSSTOG00000019366	CMSS1	73	56.650	ENSLBEG00000006298	cmss1	83	56.650	Labrus_bergylta
ENSSTOG00000019366	CMSS1	82	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSSTOG00000019366	CMSS1	100	51.590	ENSLOCG00000009391	cmss1	100	51.590	Lepisosteus_oculatus
ENSSTOG00000019366	CMSS1	82	92.105	ENSLAFG00000017509	CMSS1	100	92.105	Loxodonta_africana
ENSSTOG00000019366	CMSS1	100	90.681	ENSMFAG00000045006	CMSS1	100	90.681	Macaca_fascicularis
ENSSTOG00000019366	CMSS1	100	90.323	ENSMMUG00000002939	CMSS1	98	92.727	Macaca_mulatta
ENSSTOG00000019366	CMSS1	100	90.323	ENSMNEG00000031315	CMSS1	100	90.323	Macaca_nemestrina
ENSSTOG00000019366	CMSS1	100	89.964	ENSMLEG00000033660	CMSS1	100	89.964	Mandrillus_leucophaeus
ENSSTOG00000019366	CMSS1	100	52.365	ENSMAMG00000017176	cmss1	100	53.103	Mastacembelus_armatus
ENSSTOG00000019366	CMSS1	100	48.829	ENSMZEG00005021886	cmss1	100	51.014	Maylandia_zebra
ENSSTOG00000019366	CMSS1	82	67.105	ENSMGAG00000014360	CMSS1	100	67.105	Meleagris_gallopavo
ENSSTOG00000019366	CMSS1	100	59.498	ENSMAUG00000020609	Cmss1	100	59.498	Mesocricetus_auratus
ENSSTOG00000019366	CMSS1	100	90.288	ENSMICG00000048977	CMSS1	100	90.288	Microcebus_murinus
ENSSTOG00000019366	CMSS1	100	81.362	ENSMOCG00000021937	Cmss1	100	81.362	Microtus_ochrogaster
ENSSTOG00000019366	CMSS1	73	60.396	ENSMMOG00000019794	cmss1	84	60.396	Mola_mola
ENSSTOG00000019366	CMSS1	93	74.231	ENSMODG00000002275	CMSS1	97	74.231	Monodelphis_domestica
ENSSTOG00000019366	CMSS1	100	51.370	ENSMALG00000004250	cmss1	100	51.370	Monopterus_albus
ENSSTOG00000019366	CMSS1	100	81.786	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.786	Mus_caroli
ENSSTOG00000019366	CMSS1	100	82.857	ENSMUSG00000022748	Cmss1	100	82.857	Mus_musculus
ENSSTOG00000019366	CMSS1	100	80.714	MGP_PahariEiJ_G0016524	Cmss1	100	80.714	Mus_pahari
ENSSTOG00000019366	CMSS1	100	82.143	MGP_SPRETEiJ_G0021724	Cmss1	100	82.143	Mus_spretus
ENSSTOG00000019366	CMSS1	89	93.952	ENSMPUG00000011324	CMSS1	99	91.085	Mustela_putorius_furo
ENSSTOG00000019366	CMSS1	92	90.385	ENSMLUG00000001131	CMSS1	99	90.385	Myotis_lucifugus
ENSSTOG00000019366	CMSS1	100	86.380	ENSNGAG00000020316	Cmss1	100	86.380	Nannospalax_galili
ENSSTOG00000019366	CMSS1	100	48.495	ENSNBRG00000003095	cmss1	100	49.662	Neolamprologus_brichardi
ENSSTOG00000019366	CMSS1	100	91.398	ENSNLEG00000034172	CMSS1	100	91.398	Nomascus_leucogenys
ENSSTOG00000019366	CMSS1	82	67.544	ENSMEUG00000014505	CMSS1	100	67.544	Notamacropus_eugenii
ENSSTOG00000019366	CMSS1	100	89.964	ENSOPRG00000002986	CMSS1	100	89.964	Ochotona_princeps
ENSSTOG00000019366	CMSS1	100	86.022	ENSODEG00000005226	-	100	86.022	Octodon_degus
ENSSTOG00000019366	CMSS1	100	80.427	ENSODEG00000003558	-	100	80.427	Octodon_degus
ENSSTOG00000019366	CMSS1	100	71.223	ENSODEG00000009446	-	100	71.223	Octodon_degus
ENSSTOG00000019366	CMSS1	100	75.269	ENSODEG00000001853	-	100	75.269	Octodon_degus
ENSSTOG00000019366	CMSS1	73	60.396	ENSONIG00000006678	cmss1	77	60.396	Oreochromis_niloticus
ENSSTOG00000019366	CMSS1	92	70.769	ENSOANG00000007529	CMSS1	100	73.391	Ornithorhynchus_anatinus
ENSSTOG00000019366	CMSS1	92	89.147	ENSOCUG00000025366	CMSS1	93	89.147	Oryctolagus_cuniculus
ENSSTOG00000019366	CMSS1	100	53.684	ENSORLG00000020340	cmss1	100	54.266	Oryzias_latipes
ENSSTOG00000019366	CMSS1	82	54.148	ENSORLG00020012235	cmss1	85	57.426	Oryzias_latipes_hni
ENSSTOG00000019366	CMSS1	73	57.426	ENSORLG00015015551	cmss1	75	57.426	Oryzias_latipes_hsok
ENSSTOG00000019366	CMSS1	100	53.242	ENSOMEG00000012555	cmss1	100	53.584	Oryzias_melastigma
ENSSTOG00000019366	CMSS1	82	92.105	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSSTOG00000019366	CMSS1	92	91.085	ENSOARG00000017899	CMSS1	89	91.085	Ovis_aries
ENSSTOG00000019366	CMSS1	92	91.085	ENSPPAG00000038515	CMSS1	95	91.085	Pan_paniscus
ENSSTOG00000019366	CMSS1	100	92.473	ENSPPRG00000016767	CMSS1	100	92.473	Panthera_pardus
ENSSTOG00000019366	CMSS1	100	92.115	ENSPTIG00000018274	CMSS1	100	92.115	Panthera_tigris_altaica
ENSSTOG00000019366	CMSS1	100	89.964	ENSPTRG00000015157	CMSS1	99	91.393	Pan_troglodytes
ENSSTOG00000019366	CMSS1	92	87.209	ENSPANG00000019980	CMSS1	99	87.209	Papio_anubis
ENSSTOG00000019366	CMSS1	94	54.015	ENSPKIG00000012609	cmss1	97	56.061	Paramormyrops_kingsleyae
ENSSTOG00000019366	CMSS1	82	72.489	ENSPSIG00000003849	CMSS1	100	72.489	Pelodiscus_sinensis
ENSSTOG00000019366	CMSS1	73	60.099	ENSPMGG00000010286	cmss1	87	60.099	Periophthalmus_magnuspinnatus
ENSSTOG00000019366	CMSS1	100	82.500	ENSPEMG00000016384	Cmss1	100	82.500	Peromyscus_maniculatus_bairdii
ENSSTOG00000019366	CMSS1	73	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSSTOG00000019366	CMSS1	92	73.664	ENSPCIG00000015656	CMSS1	99	73.664	Phascolarctos_cinereus
ENSSTOG00000019366	CMSS1	100	51.916	ENSPFOG00000016849	cmss1	100	52.448	Poecilia_formosa
ENSSTOG00000019366	CMSS1	100	51.568	ENSPLAG00000008323	cmss1	100	52.098	Poecilia_latipinna
ENSSTOG00000019366	CMSS1	100	51.211	ENSPMEG00000021020	cmss1	100	53.125	Poecilia_mexicana
ENSSTOG00000019366	CMSS1	85	57.261	ENSPREG00000007618	cmss1	69	61.881	Poecilia_reticulata
ENSSTOG00000019366	CMSS1	100	89.247	ENSPPYG00000013606	CMSS1	100	89.247	Pongo_abelii
ENSSTOG00000019366	CMSS1	100	90.647	ENSPCOG00000020035	CMSS1	100	90.647	Propithecus_coquereli
ENSSTOG00000019366	CMSS1	100	79.211	ENSPVAG00000017031	CMSS1	100	79.211	Pteropus_vampyrus
ENSSTOG00000019366	CMSS1	91	48.718	ENSPNYG00000013428	cmss1	97	51.111	Pundamilia_nyererei
ENSSTOG00000019366	CMSS1	100	47.959	ENSPNAG00000007912	cmss1	100	47.959	Pygocentrus_nattereri
ENSSTOG00000019366	CMSS1	92	81.081	ENSRNOG00000027888	Cmss1	99	81.712	Rattus_norvegicus
ENSSTOG00000019366	CMSS1	100	88.889	ENSRBIG00000037931	CMSS1	100	88.889	Rhinopithecus_bieti
ENSSTOG00000019366	CMSS1	100	88.889	ENSRROG00000042910	CMSS1	100	88.889	Rhinopithecus_roxellana
ENSSTOG00000019366	CMSS1	100	84.286	ENSSBOG00000030980	CMSS1	99	89.575	Saimiri_boliviensis_boliviensis
ENSSTOG00000019366	CMSS1	89	74.603	ENSSHAG00000009321	CMSS1	99	74.603	Sarcophilus_harrisii
ENSSTOG00000019366	CMSS1	100	52.921	ENSSFOG00015001509	cmss1	100	54.828	Scleropages_formosus
ENSSTOG00000019366	CMSS1	100	52.921	ENSSMAG00000001653	cmss1	100	53.608	Scophthalmus_maximus
ENSSTOG00000019366	CMSS1	100	52.069	ENSSDUG00000007719	cmss1	100	53.608	Seriola_dumerili
ENSSTOG00000019366	CMSS1	74	62.319	ENSSLDG00000012300	cmss1	91	53.394	Seriola_lalandi_dorsalis
ENSSTOG00000019366	CMSS1	100	74.643	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSSTOG00000019366	CMSS1	81	69.912	ENSSPUG00000003865	CMSS1	100	69.912	Sphenodon_punctatus
ENSSTOG00000019366	CMSS1	93	55.263	ENSSPAG00000019182	cmss1	82	55.263	Stegastes_partitus
ENSSTOG00000019366	CMSS1	100	91.398	ENSSSCG00000011970	CMSS1	100	91.398	Sus_scrofa
ENSSTOG00000019366	CMSS1	82	64.192	ENSTGUG00000013635	CMSS1	100	64.192	Taeniopygia_guttata
ENSSTOG00000019366	CMSS1	100	50.000	ENSTRUG00000015265	cmss1	100	51.056	Takifugu_rubripes
ENSSTOG00000019366	CMSS1	73	54.455	ENSTNIG00000002880	cmss1	73	54.455	Tetraodon_nigroviridis
ENSSTOG00000019366	CMSS1	100	60.714	ENSTBEG00000016722	CMSS1	100	60.714	Tupaia_belangeri
ENSSTOG00000019366	CMSS1	100	87.455	ENSTTRG00000001562	CMSS1	100	87.455	Tursiops_truncatus
ENSSTOG00000019366	CMSS1	97	89.051	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSSTOG00000019366	CMSS1	93	91.506	ENSUMAG00000001983	CMSS1	99	91.829	Ursus_maritimus
ENSSTOG00000019366	CMSS1	100	69.176	ENSVPAG00000000263	CMSS1	100	69.176	Vicugna_pacos
ENSSTOG00000019366	CMSS1	81	91.150	ENSVVUG00000007776	-	89	91.150	Vulpes_vulpes
ENSSTOG00000019366	CMSS1	88	93.089	ENSVVUG00000021647	-	100	93.089	Vulpes_vulpes
ENSSTOG00000019366	CMSS1	100	57.244	ENSXETG00000011858	cmss1	100	57.244	Xenopus_tropicalis
ENSSTOG00000019366	CMSS1	75	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSSTOG00000019366	CMSS1	75	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus