EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000019374 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1103 bases
Position: chrJH393363.1:2249621-2250723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017379	RRM_1	PF00076.22	1.5e-21	1	2
ENSSTOP00000017379	RRM_1	PF00076.22	1.5e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027956	-	1014	-	ENSSTOP00000017379	337 (aa)	-	I3MZ33

Gene Model

Click here to download ENSSTOG00000019374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000019374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000019374	-	90	76.812	ENSSTOG00000025125	HNRNPA3	91	75.362
ENSSTOG00000019374	-	71	46.067	ENSSTOG00000029449	-	72	54.396
ENSSTOG00000019374	-	54	59.596	ENSSTOG00000026412	-	53	64.458
ENSSTOG00000019374	-	90	59.322	ENSSTOG00000006551	-	52	65.816
ENSSTOG00000019374	-	61	64.035	ENSSTOG00000034897	-	62	64.500
ENSSTOG00000019374	-	53	34.000	ENSSTOG00000013970	HNRNPD	61	32.447
ENSSTOG00000019374	-	57	70.588	ENSSTOG00000023462	-	61	70.909
ENSSTOG00000019374	-	87	48.125	ENSSTOG00000006202	-	60	60.000
ENSSTOG00000019374	-	53	72.683	ENSSTOG00000025292	-	76	72.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000019374	-	52	63.861	ENSAPOG00000003688	hnrnpa3	55	63.861	Acanthochromis_polyacanthus
ENSSTOG00000019374	-	51	47.486	ENSACIG00000021834	HNRNPA0	79	47.486	Amphilophus_citrinellus
ENSSTOG00000019374	-	52	63.861	ENSAOCG00000004095	hnrnpa3	55	63.861	Amphiprion_ocellaris
ENSSTOG00000019374	-	52	63.861	ENSAPEG00000022522	hnrnpa3	55	63.861	Amphiprion_percula
ENSSTOG00000019374	-	52	63.861	ENSATEG00000015304	hnrnpa3	60	63.861	Anabas_testudineus
ENSSTOG00000019374	-	51	73.632	ENSACAG00000012234	-	53	73.632	Anolis_carolinensis
ENSSTOG00000019374	-	52	63.366	ENSACLG00000008532	hnrnpa3	60	63.366	Astatotilapia_calliptera
ENSSTOG00000019374	-	58	80.751	ENSCJAG00000013830	-	65	80.786	Callithrix_jacchus
ENSSTOG00000019374	-	57	39.726	ENSCJAG00000006112	HNRNPA0	59	45.251	Callithrix_jacchus
ENSSTOG00000019374	-	87	70.219	ENSCAPG00000003643	-	86	72.414	Cavia_aperea
ENSSTOG00000019374	-	85	40.895	ENSCATG00000021167	HNRNPA0	59	45.856	Cercocebus_atys
ENSSTOG00000019374	-	94	60.061	ENSCLAG00000007120	-	51	55.191	Chinchilla_lanigera
ENSSTOG00000019374	-	53	42.029	ENSCLAG00000015132	HNRNPA0	63	45.304	Chinchilla_lanigera
ENSSTOG00000019374	-	60	55.702	ENSCSAG00000011517	-	51	53.731	Chlorocebus_sabaeus
ENSSTOG00000019374	-	89	37.082	ENSCING00000013663	-	51	52.406	Ciona_intestinalis
ENSSTOG00000019374	-	87	77.259	ENSCANG00000017881	-	88	77.259	Colobus_angolensis_palliatus
ENSSTOG00000019374	-	85	39.936	ENSCGRG00001005548	Hnrnpa0	60	45.304	Cricetulus_griseus_chok1gshd
ENSSTOG00000019374	-	56	62.037	ENSCGRG00001010070	-	67	63.592	Cricetulus_griseus_chok1gshd
ENSSTOG00000019374	-	57	61.644	ENSCGRG00000007592	-	65	63.592	Cricetulus_griseus_crigri
ENSSTOG00000019374	-	50	63.636	ENSCVAG00000018995	hnrnpa3	57	63.636	Cyprinodon_variegatus
ENSSTOG00000019374	-	59	60.526	ENSDARG00000059351	hnrnpa3	83	65.174	Danio_rerio
ENSSTOG00000019374	-	69	76.154	ENSDNOG00000031964	-	71	71.616	Dasypus_novemcinctus
ENSSTOG00000019374	-	86	54.259	ENSETEG00000007747	-	69	65.152	Echinops_telfairi
ENSSTOG00000019374	-	64	42.857	ENSEBUG00000007989	-	53	46.154	Eptatretus_burgeri
ENSSTOG00000019374	-	58	48.649	ENSEBUG00000016570	HNRNPA0	55	54.595	Eptatretus_burgeri
ENSSTOG00000019374	-	88	50.464	ENSELUG00000023080	hnrnpa3	62	62.295	Esox_lucius
ENSSTOG00000019374	-	58	64.019	ENSFDAG00000018739	-	80	64.019	Fukomys_damarensis
ENSSTOG00000019374	-	59	58.150	ENSGACG00000004477	hnrnpa3	65	62.376	Gasterosteus_aculeatus
ENSSTOG00000019374	-	52	63.366	ENSHBUG00000019734	hnrnpa3	60	63.366	Haplochromis_burtoni
ENSSTOG00000019374	-	85	38.978	ENSHGLG00000018216	HNRNPA0	61	45.304	Heterocephalus_glaber_female
ENSSTOG00000019374	-	54	74.874	ENSHGLG00000014577	-	71	77.083	Heterocephalus_glaber_female
ENSSTOG00000019374	-	52	62.871	ENSKMAG00000015973	hnrnpa3	60	62.871	Kryptolebias_marmoratus
ENSSTOG00000019374	-	52	64.851	ENSLBEG00000016767	hnrnpa3	60	64.851	Labrus_bergylta
ENSSTOG00000019374	-	89	41.692	ENSLACG00000014480	HNRNPA0	59	46.067	Latimeria_chalumnae
ENSSTOG00000019374	-	58	65.315	ENSLACG00000008189	hnrnpa3	52	68.984	Latimeria_chalumnae
ENSSTOG00000019374	-	52	67.488	ENSLOCG00000006986	hnrnpa3	54	68.085	Lepisosteus_oculatus
ENSSTOG00000019374	-	86	44.695	ENSLAFG00000027712	-	58	71.751	Loxodonta_africana
ENSSTOG00000019374	-	61	63.677	ENSMNEG00000038943	-	91	62.719	Macaca_nemestrina
ENSSTOG00000019374	-	53	42.029	ENSMLEG00000026629	HNRNPA0	59	45.856	Mandrillus_leucophaeus
ENSSTOG00000019374	-	76	43.019	ENSMAMG00000017754	HNRNPA0	70	48.603	Mastacembelus_armatus
ENSSTOG00000019374	-	50	64.796	ENSMZEG00005004663	hnrnpa3	59	64.796	Maylandia_zebra
ENSSTOG00000019374	-	52	65.025	ENSMALG00000009691	hnrnpa3	77	63.043	Monopterus_albus
ENSSTOG00000019374	-	63	42.678	ENSMPUG00000019790	HNRNPA0	59	45.856	Mustela_putorius_furo
ENSSTOG00000019374	-	53	42.029	ENSMLUG00000012683	-	59	45.856	Myotis_lucifugus
ENSSTOG00000019374	-	85	55.696	ENSNGAG00000001008	-	57	66.346	Nannospalax_galili
ENSSTOG00000019374	-	52	76.923	ENSNLEG00000027151	-	58	76.923	Nomascus_leucogenys
ENSSTOG00000019374	-	85	40.895	ENSNLEG00000008518	HNRNPA0	58	45.856	Nomascus_leucogenys
ENSSTOG00000019374	-	85	38.978	ENSMEUG00000013675	HNRNPA0	58	45.810	Notamacropus_eugenii
ENSSTOG00000019374	-	94	64.589	ENSODEG00000016578	-	70	72.523	Octodon_degus
ENSSTOG00000019374	-	55	61.395	ENSONIG00000008607	hnrnpa3	50	63.366	Oreochromis_niloticus
ENSSTOG00000019374	-	52	63.861	ENSORLG00000017561	hnrnpa3	59	63.861	Oryzias_latipes
ENSSTOG00000019374	-	95	34.969	ENSORLG00020007505	-	58	39.080	Oryzias_latipes_hni
ENSSTOG00000019374	-	90	35.135	ENSORLG00020007109	-	58	38.462	Oryzias_latipes_hni
ENSSTOG00000019374	-	52	64.356	ENSORLG00020020788	hnrnpa3	59	64.356	Oryzias_latipes_hni
ENSSTOG00000019374	-	95	35.692	ENSORLG00020008203	-	58	38.728	Oryzias_latipes_hni
ENSSTOG00000019374	-	52	63.861	ENSORLG00015014774	hnrnpa3	59	63.861	Oryzias_latipes_hsok
ENSSTOG00000019374	-	88	36.310	ENSORLG00015016507	-	55	40.113	Oryzias_latipes_hsok
ENSSTOG00000019374	-	95	33.746	ENSORLG00015016157	-	61	38.857	Oryzias_latipes_hsok
ENSSTOG00000019374	-	95	35.294	ENSORLG00015016169	HNRNPA0	58	38.506	Oryzias_latipes_hsok
ENSSTOG00000019374	-	89	36.556	ENSORLG00015017144	-	58	40.230	Oryzias_latipes_hsok
ENSSTOG00000019374	-	52	64.356	ENSOMEG00000004838	hnrnpa3	60	64.356	Oryzias_melastigma
ENSSTOG00000019374	-	53	42.029	ENSPANG00000012900	HNRNPA0	59	45.856	Papio_anubis
ENSSTOG00000019374	-	52	66.832	ENSPKIG00000022916	hnrnpa3	72	66.832	Paramormyrops_kingsleyae
ENSSTOG00000019374	-	50	58.462	ENSPMGG00000000747	hnrnpa3	75	57.233	Periophthalmus_magnuspinnatus
ENSSTOG00000019374	-	65	46.964	ENSPMAG00000004449	-	81	46.444	Petromyzon_marinus
ENSSTOG00000019374	-	52	62.376	ENSPFOG00000014049	hnrnpa3	61	62.376	Poecilia_formosa
ENSSTOG00000019374	-	52	62.376	ENSPMEG00000006390	hnrnpa3	61	62.376	Poecilia_mexicana
ENSSTOG00000019374	-	52	62.376	ENSPREG00000005411	hnrnpa3	62	62.376	Poecilia_reticulata
ENSSTOG00000019374	-	51	76.000	ENSPPYG00000001012	-	65	76.000	Pongo_abelii
ENSSTOG00000019374	-	57	53.881	ENSPNYG00000008424	hnrnpa3	74	64.972	Pundamilia_nyererei
ENSSTOG00000019374	-	85	37.380	ENSRNOG00000039876	LOC681410	60	45.304	Rattus_norvegicus
ENSSTOG00000019374	-	88	63.175	ENSRROG00000034643	-	55	65.385	Rhinopithecus_roxellana
ENSSTOG00000019374	-	52	66.010	ENSSFOG00015001814	hnrnpa3	56	66.337	Scleropages_formosus
ENSSTOG00000019374	-	56	59.545	ENSSMAG00000015218	hnrnpa3	53	61.881	Scophthalmus_maximus
ENSSTOG00000019374	-	52	63.366	ENSSDUG00000000381	hnrnpa3	60	63.366	Seriola_dumerili
ENSSTOG00000019374	-	52	63.366	ENSSPAG00000008969	hnrnpa3	60	63.366	Stegastes_partitus
ENSSTOG00000019374	-	50	47.980	ENSSSCG00000040926	-	50	50.000	Sus_scrofa
ENSSTOG00000019374	-	58	64.789	ENSSSCG00000001098	-	64	66.518	Sus_scrofa
ENSSTOG00000019374	-	52	62.871	ENSTRUG00000017504	hnrnpa3	60	62.871	Takifugu_rubripes
ENSSTOG00000019374	-	50	63.776	ENSTNIG00000016958	hnrnpa3	58	62.500	Tetraodon_nigroviridis
ENSSTOG00000019374	-	62	40.336	ENSTTRG00000000499	HNRNPA0	60	45.856	Tursiops_truncatus
ENSSTOG00000019374	-	60	38.095	ENSVVUG00000014736	HNRNPA0	59	45.856	Vulpes_vulpes
ENSSTOG00000019374	-	54	70.142	ENSXETG00000001806	hnrnpa3	55	70.142	Xenopus_tropicalis
ENSSTOG00000019374	-	52	62.871	ENSXMAG00000000439	hnrnpa3	61	62.871	Xiphophorus_maculatus