EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000020149 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1504 bases
Position: chrJH393543.1:1242706-1244209
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000016930	TruB_N	PF01509.18	3.4e-14	1	1
ENSSTOP00000027949	TruB_N	PF01509.18	3.4e-14	1	1
ENSSTOP00000027949	PUA	PF01472.20	9e-17	1	1
ENSSTOP00000016930	PUA	PF01472.20	9.2e-17	1	1
ENSSTOP00000027949	DKCLD	PF08068.12	8.7e-29	1	1
ENSSTOP00000016930	DKCLD	PF08068.12	9.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000028109	-	1458	-	ENSSTOP00000016930	485 (aa)	-	I3MXT5
ENSSTOT00000038891	-	1431	-	ENSSTOP00000027949	476 (aa)	-	A0A287D342

Gene Model

Click here to download ENSSTOG00000020149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000020149	-	94	89.733	ENSSTOG00000001074	-	100	90.144
ENSSTOG00000020149	-	97	82.317	ENSSTOG00000011904	-	93	82.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020149	-	100	84.078	ENSG00000130826	DKC1	99	97.073	Homo_sapiens
ENSSTOG00000020149	-	85	74.596	ENSAPOG00000007799	dkc1	84	74.596	Acanthochromis_polyacanthus
ENSSTOG00000020149	-	88	84.802	ENSAMEG00000002776	DKC1	100	82.066	Ailuropoda_melanoleuca
ENSSTOG00000020149	-	85	75.174	ENSACIG00000022614	dkc1	87	74.827	Amphilophus_citrinellus
ENSSTOG00000020149	-	93	69.057	ENSAOCG00000013159	dkc1	86	74.065	Amphiprion_ocellaris
ENSSTOG00000020149	-	92	70.168	ENSAPEG00000002284	dkc1	96	69.118	Amphiprion_percula
ENSSTOG00000020149	-	78	76.543	ENSATEG00000013682	dkc1	79	76.543	Anabas_testudineus
ENSSTOG00000020149	-	86	75.506	ENSACAG00000015600	DKC1	77	75.506	Anolis_carolinensis
ENSSTOG00000020149	-	96	83.943	ENSANAG00000022732	DKC1	97	84.306	Aotus_nancymaae
ENSSTOG00000020149	-	78	77.889	ENSACLG00000015605	dkc1	81	77.889	Astatotilapia_calliptera
ENSSTOG00000020149	-	85	74.769	ENSAMXG00000017108	dkc1	87	73.230	Astyanax_mexicanus
ENSSTOG00000020149	-	97	82.164	ENSBTAG00000013045	DKC1	97	82.495	Bos_taurus
ENSSTOG00000020149	-	79	62.438	WBGene00010478	K01G5.5	98	58.716	Caenorhabditis_elegans
ENSSTOG00000020149	-	100	84.466	ENSCJAG00000004210	DKC1	97	85.542	Callithrix_jacchus
ENSSTOG00000020149	-	97	71.888	ENSCAFG00000009311	-	97	71.486	Canis_familiaris
ENSSTOG00000020149	-	100	80.497	ENSCAFG00000019620	-	100	80.497	Canis_familiaris
ENSSTOG00000020149	-	100	80.497	ENSCAFG00020008918	-	100	80.497	Canis_lupus_dingo
ENSSTOG00000020149	-	97	72.802	ENSCAFG00020009379	-	93	72.393	Canis_lupus_dingo
ENSSTOG00000020149	-	100	81.871	ENSCHIG00000017392	DKC1	100	82.261	Capra_hircus
ENSSTOG00000020149	-	96	84.127	ENSTSYG00000007681	DKC1	96	84.127	Carlito_syrichta
ENSSTOG00000020149	-	89	79.130	ENSCAPG00000003342	DKC1	99	83.448	Cavia_aperea
ENSSTOG00000020149	-	100	85.185	ENSCPOG00000008825	DKC1	100	85.575	Cavia_porcellus
ENSSTOG00000020149	-	96	76.613	ENSCCAG00000027418	DKC1	96	77.016	Cebus_capucinus
ENSSTOG00000020149	-	100	85.019	ENSCATG00000033602	DKC1	97	86.117	Cercocebus_atys
ENSSTOG00000020149	-	96	85.020	ENSCLAG00000000720	DKC1	97	84.818	Chinchilla_lanigera
ENSSTOG00000020149	-	100	85.019	ENSCSAG00000006706	DKC1	97	86.117	Chlorocebus_sabaeus
ENSSTOG00000020149	-	91	75.914	ENSCPBG00000005858	DKC1	94	78.311	Chrysemys_picta_bellii
ENSSTOG00000020149	-	80	70.171	ENSCING00000004599	-	84	67.661	Ciona_intestinalis
ENSSTOG00000020149	-	81	68.735	ENSCSAVG00000010047	-	88	70.886	Ciona_savignyi
ENSSTOG00000020149	-	100	85.019	ENSCANG00000027987	DKC1	97	86.117	Colobus_angolensis_palliatus
ENSSTOG00000020149	-	100	83.431	ENSCGRG00001014574	-	100	83.431	Cricetulus_griseus_chok1gshd
ENSSTOG00000020149	-	100	61.100	ENSCGRG00001016789	-	94	62.584	Cricetulus_griseus_chok1gshd
ENSSTOG00000020149	-	99	61.983	ENSCGRG00000014809	-	93	62.472	Cricetulus_griseus_crigri
ENSSTOG00000020149	-	100	83.431	ENSCGRG00000016075	-	100	83.431	Cricetulus_griseus_crigri
ENSSTOG00000020149	-	86	73.165	ENSCSEG00000012633	dkc1	90	73.041	Cynoglossus_semilaevis
ENSSTOG00000020149	-	85	73.210	ENSCVAG00000010155	dkc1	84	73.672	Cyprinodon_variegatus
ENSSTOG00000020149	-	83	75.179	ENSDARG00000016484	dkc1	85	74.134	Danio_rerio
ENSSTOG00000020149	-	100	83.626	ENSDNOG00000004218	DKC1	100	84.016	Dasypus_novemcinctus
ENSSTOG00000020149	-	57	71.000	ENSDORG00000013566	-	100	71.000	Dipodomys_ordii
ENSSTOG00000020149	-	85	64.318	FBgn0259937	Nop60B	85	64.318	Drosophila_melanogaster
ENSSTOG00000020149	-	90	78.970	ENSETEG00000016095	DKC1	95	78.970	Echinops_telfairi
ENSSTOG00000020149	-	65	71.131	ENSEBUG00000015962	dkc1	99	73.720	Eptatretus_burgeri
ENSSTOG00000020149	-	100	81.453	ENSEASG00005007484	DKC1	100	81.644	Equus_asinus_asinus
ENSSTOG00000020149	-	100	81.453	ENSECAG00000023524	DKC1	100	81.644	Equus_caballus
ENSSTOG00000020149	-	82	80.235	ENSEEUG00000003323	DKC1	99	80.235	Erinaceus_europaeus
ENSSTOG00000020149	-	85	74.134	ENSELUG00000014538	dkc1	85	73.953	Esox_lucius
ENSSTOG00000020149	-	100	81.287	ENSFCAG00000006577	DKC1	100	82.456	Felis_catus
ENSSTOG00000020149	-	85	76.244	ENSFALG00000011496	DKC1	85	75.615	Ficedula_albicollis
ENSSTOG00000020149	-	96	83.537	ENSFDAG00000002516	DKC1	100	84.086	Fukomys_damarensis
ENSSTOG00000020149	-	84	74.178	ENSFHEG00000004627	dkc1	89	71.744	Fundulus_heteroclitus
ENSSTOG00000020149	-	77	75.192	ENSGMOG00000017277	dkc1	100	75.192	Gadus_morhua
ENSSTOG00000020149	-	84	78.391	ENSGALG00000005054	DKC1	85	77.652	Gallus_gallus
ENSSTOG00000020149	-	85	73.782	ENSGAFG00000011486	dkc1	74	73.782	Gambusia_affinis
ENSSTOG00000020149	-	78	78.392	ENSGACG00000004373	dkc1	99	77.184	Gasterosteus_aculeatus
ENSSTOG00000020149	-	91	76.129	ENSGAGG00000011330	DKC1	89	77.243	Gopherus_agassizii
ENSSTOG00000020149	-	100	84.078	ENSGGOG00000001045	DKC1	97	86.519	Gorilla_gorilla
ENSSTOG00000020149	-	85	74.074	ENSHBUG00000012436	dkc1	86	74.074	Haplochromis_burtoni
ENSSTOG00000020149	-	97	83.600	ENSHGLG00000000649	DKC1	100	84.526	Heterocephalus_glaber_female
ENSSTOG00000020149	-	93	84.375	ENSHGLG00100001153	DKC1	97	84.909	Heterocephalus_glaber_male
ENSSTOG00000020149	-	85	73.318	ENSHCOG00000021099	dkc1	86	73.843	Hippocampus_comes
ENSSTOG00000020149	-	96	67.535	ENSIPUG00000010309	dkc1	97	67.936	Ictalurus_punctatus
ENSSTOG00000020149	-	57	70.569	ENSJJAG00000010086	-	100	70.569	Jaculus_jaculus
ENSSTOG00000020149	-	85	71.759	ENSKMAG00000008010	dkc1	90	69.890	Kryptolebias_marmoratus
ENSSTOG00000020149	-	84	73.893	ENSLBEG00000019122	dkc1	92	72.185	Labrus_bergylta
ENSSTOG00000020149	-	87	75.395	ENSLACG00000014025	DKC1	91	80.402	Latimeria_chalumnae
ENSSTOG00000020149	-	86	75.682	ENSLOCG00000013713	dkc1	88	77.049	Lepisosteus_oculatus
ENSSTOG00000020149	-	93	83.473	ENSLAFG00000000221	DKC1	93	83.473	Loxodonta_africana
ENSSTOG00000020149	-	100	84.825	ENSMFAG00000032398	DKC1	83	85.915	Macaca_fascicularis
ENSSTOG00000020149	-	100	85.019	ENSMMUG00000005768	DKC1	97	86.117	Macaca_mulatta
ENSSTOG00000020149	-	100	85.019	ENSMNEG00000034503	DKC1	97	86.117	Macaca_nemestrina
ENSSTOG00000020149	-	100	85.019	ENSMLEG00000034422	DKC1	97	86.117	Mandrillus_leucophaeus
ENSSTOG00000020149	-	79	77.667	ENSMAMG00000005427	dkc1	89	78.392	Mastacembelus_armatus
ENSSTOG00000020149	-	85	74.306	ENSMZEG00005014503	dkc1	86	74.306	Maylandia_zebra
ENSSTOG00000020149	-	76	78.338	ENSMGAG00000009238	DKC1	87	77.340	Meleagris_gallopavo
ENSSTOG00000020149	-	57	71.333	ENSMAUG00000016454	-	100	71.333	Mesocricetus_auratus
ENSSTOG00000020149	-	100	83.044	ENSMICG00000038751	-	100	83.430	Microcebus_murinus
ENSSTOG00000020149	-	89	75.435	ENSMICG00000002818	-	99	75.435	Microcebus_murinus
ENSSTOG00000020149	-	57	68.333	ENSMOCG00000001169	-	100	68.333	Microtus_ochrogaster
ENSSTOG00000020149	-	78	77.387	ENSMMOG00000020348	dkc1	87	77.387	Mola_mola
ENSSTOG00000020149	-	84	78.984	ENSMODG00000009243	DKC1	78	78.271	Monodelphis_domestica
ENSSTOG00000020149	-	85	74.371	ENSMALG00000009454	dkc1	86	73.853	Monopterus_albus
ENSSTOG00000020149	-	100	76.970	MGP_CAROLIEiJ_G0033191	Dkc1	99	86.897	Mus_caroli
ENSSTOG00000020149	-	100	82.846	ENSMUSG00000031403	Dkc1	100	83.041	Mus_musculus
ENSSTOG00000020149	-	99	83.008	MGP_PahariEiJ_G0031735	Dkc1	100	84.180	Mus_pahari
ENSSTOG00000020149	-	100	82.456	MGP_SPRETEiJ_G0034351	Dkc1	100	83.626	Mus_spretus
ENSSTOG00000020149	-	97	79.487	ENSMPUG00000016136	DKC1	93	81.262	Mustela_putorius_furo
ENSSTOG00000020149	-	90	76.923	ENSMLUG00000011918	DKC1	100	75.862	Myotis_lucifugus
ENSSTOG00000020149	-	57	71.237	ENSNGAG00000015724	-	100	71.237	Nannospalax_galili
ENSSTOG00000020149	-	78	78.788	ENSNBRG00000005638	dkc1	80	78.392	Neolamprologus_brichardi
ENSSTOG00000020149	-	96	85.887	ENSNLEG00000014323	DKC1	96	86.290	Nomascus_leucogenys
ENSSTOG00000020149	-	86	74.715	ENSMEUG00000001066	DKC1	96	73.303	Notamacropus_eugenii
ENSSTOG00000020149	-	88	79.508	ENSOPRG00000005248	DKC1	90	80.055	Ochotona_princeps
ENSSTOG00000020149	-	57	72.000	ENSODEG00000000549	-	100	72.667	Octodon_degus
ENSSTOG00000020149	-	86	84.174	ENSODEG00000011816	-	91	83.226	Octodon_degus
ENSSTOG00000020149	-	85	75.231	ENSONIG00000013889	dkc1	86	75.231	Oreochromis_niloticus
ENSSTOG00000020149	-	83	82.093	ENSOANG00000008713	-	96	79.362	Ornithorhynchus_anatinus
ENSSTOG00000020149	-	60	62.876	ENSOANG00000022295	-	95	61.652	Ornithorhynchus_anatinus
ENSSTOG00000020149	-	97	83.903	ENSOCUG00000012646	DKC1	100	84.466	Oryctolagus_cuniculus
ENSSTOG00000020149	-	84	73.193	ENSORLG00000018748	dkc1	84	72.644	Oryzias_latipes
ENSSTOG00000020149	-	84	74.528	ENSOMEG00000005786	dkc1	82	74.895	Oryzias_melastigma
ENSSTOG00000020149	-	97	82.446	ENSOGAG00000003399	DKC1	97	82.643	Otolemur_garnettii
ENSSTOG00000020149	-	100	80.777	ENSOARG00000003047	DKC1	100	81.287	Ovis_aries
ENSSTOG00000020149	-	100	85.019	ENSPPAG00000023820	DKC1	97	86.117	Pan_paniscus
ENSSTOG00000020149	-	90	82.618	ENSPPRG00000009104	DKC1	100	82.651	Panthera_pardus
ENSSTOG00000020149	-	86	83.716	ENSPTIG00000017469	DKC1	96	82.195	Panthera_tigris_altaica
ENSSTOG00000020149	-	100	84.078	ENSPTRG00000022449	DKC1	97	86.519	Pan_troglodytes
ENSSTOG00000020149	-	99	85.490	ENSPTRG00000043416	-	84	86.519	Pan_troglodytes
ENSSTOG00000020149	-	100	85.019	ENSPANG00000011978	DKC1	97	86.117	Papio_anubis
ENSSTOG00000020149	-	84	75.467	ENSPKIG00000008443	dkc1	99	70.426	Paramormyrops_kingsleyae
ENSSTOG00000020149	-	70	84.078	ENSPSIG00000013765	DKC1	86	84.314	Pelodiscus_sinensis
ENSSTOG00000020149	-	78	80.519	ENSPMGG00000004097	dkc1	82	72.665	Periophthalmus_magnuspinnatus
ENSSTOG00000020149	-	100	69.734	ENSPEMG00000013348	Dkc1	100	69.734	Peromyscus_maniculatus_bairdii
ENSSTOG00000020149	-	87	79.326	ENSPCIG00000016706	DKC1	77	78.166	Phascolarctos_cinereus
ENSSTOG00000020149	-	85	74.014	ENSPFOG00000018653	dkc1	86	74.014	Poecilia_formosa
ENSSTOG00000020149	-	85	74.014	ENSPLAG00000003272	dkc1	77	74.014	Poecilia_latipinna
ENSSTOG00000020149	-	85	74.014	ENSPMEG00000010413	dkc1	86	74.014	Poecilia_mexicana
ENSSTOG00000020149	-	85	74.306	ENSPREG00000004100	dkc1	84	74.253	Poecilia_reticulata
ENSSTOG00000020149	-	99	85.265	ENSPPYG00000020892	DKC1	97	86.382	Pongo_abelii
ENSSTOG00000020149	-	71	85.912	ENSPCAG00000015034	DKC1	73	83.957	Procavia_capensis
ENSSTOG00000020149	-	100	85.409	ENSPCOG00000026874	DKC1	100	85.798	Propithecus_coquereli
ENSSTOG00000020149	-	99	82.470	ENSPVAG00000009222	DKC1	99	82.271	Pteropus_vampyrus
ENSSTOG00000020149	-	85	73.409	ENSPNYG00000020063	dkc1	88	73.077	Pundamilia_nyererei
ENSSTOG00000020149	-	86	73.563	ENSPNAG00000005780	dkc1	86	73.563	Pygocentrus_nattereri
ENSSTOG00000020149	-	96	72.819	ENSRNOG00000055562	Dkc1	92	73.629	Rattus_norvegicus
ENSSTOG00000020149	-	100	85.019	ENSRBIG00000028457	DKC1	83	86.117	Rhinopithecus_bieti
ENSSTOG00000020149	-	100	85.019	ENSRROG00000044780	DKC1	97	86.117	Rhinopithecus_roxellana
ENSSTOG00000020149	-	75	65.365	YLR175W	-	98	57.627	Saccharomyces_cerevisiae
ENSSTOG00000020149	-	99	84.902	ENSSBOG00000033746	DKC1	99	85.294	Saimiri_boliviensis_boliviensis
ENSSTOG00000020149	-	90	76.774	ENSSHAG00000002463	DKC1	97	77.899	Sarcophilus_harrisii
ENSSTOG00000020149	-	86	74.324	ENSSFOG00015009585	dkc1	85	75.576	Scleropages_formosus
ENSSTOG00000020149	-	85	75.231	ENSSMAG00000002552	dkc1	88	73.913	Scophthalmus_maximus
ENSSTOG00000020149	-	85	74.312	ENSSDUG00000009963	dkc1	85	74.537	Seriola_dumerili
ENSSTOG00000020149	-	77	79.135	ENSSLDG00000019342	dkc1	92	71.715	Seriola_lalandi_dorsalis
ENSSTOG00000020149	-	92	78.782	ENSSARG00000001822	DKC1	94	79.158	Sorex_araneus
ENSSTOG00000020149	-	100	71.293	ENSSPUG00000018907	DKC1	100	72.296	Sphenodon_punctatus
ENSSTOG00000020149	-	85	73.380	ENSSPAG00000002585	dkc1	81	73.380	Stegastes_partitus
ENSSTOG00000020149	-	100	81.298	ENSSSCG00000012823	DKC1	100	81.298	Sus_scrofa
ENSSTOG00000020149	-	77	77.193	ENSTGUG00000006781	DKC1	89	77.250	Taeniopygia_guttata
ENSSTOG00000020149	-	85	73.782	ENSTRUG00000004413	dkc1	86	73.782	Takifugu_rubripes
ENSSTOG00000020149	-	85	62.667	ENSTNIG00000002582	dkc1	87	62.667	Tetraodon_nigroviridis
ENSSTOG00000020149	-	73	85.311	ENSTBEG00000011262	DKC1	97	85.028	Tupaia_belangeri
ENSSTOG00000020149	-	70	87.365	ENSTTRG00000008089	DKC1	70	87.365	Tursiops_truncatus
ENSSTOG00000020149	-	95	82.809	ENSUAMG00000022721	DKC1	92	84.862	Ursus_americanus
ENSSTOG00000020149	-	95	82.390	ENSUMAG00000016899	DKC1	92	88.889	Ursus_maritimus
ENSSTOG00000020149	-	97	70.276	ENSVVUG00000021671	-	91	70.276	Vulpes_vulpes
ENSSTOG00000020149	-	99	79.810	ENSVVUG00000020734	-	89	79.619	Vulpes_vulpes
ENSSTOG00000020149	-	89	74.279	ENSXETG00000032517	DKC1	85	76.512	Xenopus_tropicalis
ENSSTOG00000020149	-	85	73.843	ENSXCOG00000005498	dkc1	92	73.843	Xiphophorus_couchianus
ENSSTOG00000020149	-	85	73.843	ENSXMAG00000004919	dkc1	86	73.843	Xiphophorus_maculatus