EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000020510 (Gene tree)
Gene ID: 101958211
Gene Symbol: GPATCH4
Alias: DKFZP434F1735|FLJ20249|GPATC4
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 11785 bases
Position: chrJH393390.1:5769541-5781325
Accession: 101958211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000024110	G-patch	PF01585.23	7.1e-11	1	1
ENSSTOP00000019807	G-patch	PF01585.23	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027062	GPATCH4-201	5462	XM_005331396	ENSSTOP00000019807	415 (aa)	XP_005331453	I3N611
ENSSTOT00000041747	GPATCH4-202	393	-	ENSSTOP00000024110	130 (aa)	-	A0A287CS03

Gene Model

Click here to download ENSSTOG00000020510's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020510's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020510	GPATCH4	91	89.916	ENSG00000160818	GPATCH4	100	89.916	Homo_sapiens
ENSSTOG00000020510	GPATCH4	84	48.718	ENSAPOG00000008436	gpatch4	53	47.619	Acanthochromis_polyacanthus
ENSSTOG00000020510	GPATCH4	95	81.250	ENSAMEG00000014829	GPATCH4	89	62.016	Ailuropoda_melanoleuca
ENSSTOG00000020510	GPATCH4	79	50.485	ENSACIG00000017309	-	85	50.485	Amphilophus_citrinellus
ENSSTOG00000020510	GPATCH4	89	45.669	ENSAOCG00000015494	gpatch4	53	46.047	Amphiprion_ocellaris
ENSSTOG00000020510	GPATCH4	84	47.500	ENSAPEG00000022243	gpatch4	53	46.047	Amphiprion_percula
ENSSTOG00000020510	GPATCH4	84	48.333	ENSATEG00000006359	gpatch4	50	46.083	Anabas_testudineus
ENSSTOG00000020510	GPATCH4	89	88.889	ENSANAG00000035354	GPATCH4	95	68.802	Aotus_nancymaae
ENSSTOG00000020510	GPATCH4	84	49.153	ENSACLG00000010456	gpatch4	55	53.684	Astatotilapia_calliptera
ENSSTOG00000020510	GPATCH4	84	47.458	ENSAMXG00000034049	gpatch4	84	44.231	Astyanax_mexicanus
ENSSTOG00000020510	GPATCH4	89	87.179	ENSBTAG00000000406	GPATCH4	93	65.375	Bos_taurus
ENSSTOG00000020510	GPATCH4	91	84.874	ENSCJAG00000006048	GPATCH4	98	84.874	Callithrix_jacchus
ENSSTOG00000020510	GPATCH4	95	81.600	ENSCJAG00000031662	-	84	88.430	Callithrix_jacchus
ENSSTOG00000020510	GPATCH4	89	79.487	ENSCJAG00000001883	-	96	81.356	Callithrix_jacchus
ENSSTOG00000020510	GPATCH4	95	78.906	ENSCAFG00000016788	GPATCH4	55	76.957	Canis_familiaris
ENSSTOG00000020510	GPATCH4	85	85.586	ENSCAFG00020005274	-	88	84.821	Canis_lupus_dingo
ENSSTOG00000020510	GPATCH4	90	80.508	ENSCAFG00020006707	-	96	80.508	Canis_lupus_dingo
ENSSTOG00000020510	GPATCH4	89	86.325	ENSCHIG00000021295	GPATCH4	93	62.694	Capra_hircus
ENSSTOG00000020510	GPATCH4	91	86.777	ENSTSYG00000026904	-	99	77.305	Carlito_syrichta
ENSSTOG00000020510	GPATCH4	91	87.395	ENSCPOG00000013701	-	100	87.395	Cavia_porcellus
ENSSTOG00000020510	GPATCH4	91	84.874	ENSCCAG00000036114	GPATCH4	98	84.874	Cebus_capucinus
ENSSTOG00000020510	GPATCH4	89	87.179	ENSCATG00000042152	GPATCH4	82	87.179	Cercocebus_atys
ENSSTOG00000020510	GPATCH4	89	88.793	ENSCLAG00000002967	-	95	63.614	Chinchilla_lanigera
ENSSTOG00000020510	GPATCH4	89	88.034	ENSCSAG00000002161	GPATCH4	85	69.251	Chlorocebus_sabaeus
ENSSTOG00000020510	GPATCH4	86	56.667	ENSCPBG00000025803	GPATCH4	73	51.802	Chrysemys_picta_bellii
ENSSTOG00000020510	GPATCH4	75	47.222	ENSCING00000004717	-	70	44.944	Ciona_intestinalis
ENSSTOG00000020510	GPATCH4	75	41.284	ENSCSAVG00000003297	-	64	43.529	Ciona_savignyi
ENSSTOG00000020510	GPATCH4	89	88.034	ENSCANG00000030031	GPATCH4	82	88.034	Colobus_angolensis_palliatus
ENSSTOG00000020510	GPATCH4	89	84.615	ENSCGRG00001016898	Gpatch4	96	56.220	Cricetulus_griseus_chok1gshd
ENSSTOG00000020510	GPATCH4	89	84.615	ENSCGRG00000008399	Gpatch4	98	55.944	Cricetulus_griseus_crigri
ENSSTOG00000020510	GPATCH4	58	58.667	ENSCSEG00000012030	gpatch4	55	46.196	Cynoglossus_semilaevis
ENSSTOG00000020510	GPATCH4	89	48.800	ENSDARG00000091931	gpatch4	73	48.592	Danio_rerio
ENSSTOG00000020510	GPATCH4	95	83.594	ENSDNOG00000034673	GPATCH4	85	66.667	Dasypus_novemcinctus
ENSSTOG00000020510	GPATCH4	95	79.032	ENSDORG00000011332	-	87	77.444	Dipodomys_ordii
ENSSTOG00000020510	GPATCH4	86	32.824	FBgn0039829	CG15561	53	38.462	Drosophila_melanogaster
ENSSTOG00000020510	GPATCH4	89	86.325	ENSETEG00000000659	-	86	60.154	Echinops_telfairi
ENSSTOG00000020510	GPATCH4	65	37.634	ENSEBUG00000006498	-	55	43.114	Eptatretus_burgeri
ENSSTOG00000020510	GPATCH4	99	80.769	ENSEASG00005018284	GPATCH4	95	61.085	Equus_asinus_asinus
ENSSTOG00000020510	GPATCH4	99	80.000	ENSECAG00000011135	GPATCH4	99	65.730	Equus_caballus
ENSSTOG00000020510	GPATCH4	89	81.197	ENSEEUG00000003221	-	81	60.111	Erinaceus_europaeus
ENSSTOG00000020510	GPATCH4	85	87.500	ENSFCAG00000006554	GPATCH4	73	73.384	Felis_catus
ENSSTOG00000020510	GPATCH4	89	52.066	ENSFHEG00000003097	gpatch4	57	45.249	Fundulus_heteroclitus
ENSSTOG00000020510	GPATCH4	85	44.068	ENSGALG00000048365	GPATCH4	51	48.649	Gallus_gallus
ENSSTOG00000020510	GPATCH4	89	46.281	ENSGAFG00000021732	gpatch4	68	44.660	Gambusia_affinis
ENSSTOG00000020510	GPATCH4	88	47.200	ENSGACG00000013318	gpatch4	60	48.000	Gasterosteus_aculeatus
ENSSTOG00000020510	GPATCH4	89	57.258	ENSGAGG00000020710	GPATCH4	64	57.653	Gopherus_agassizii
ENSSTOG00000020510	GPATCH4	89	88.034	ENSGGOG00000000753	GPATCH4	82	88.034	Gorilla_gorilla
ENSSTOG00000020510	GPATCH4	84	49.153	ENSHBUG00000009675	gpatch4	55	53.684	Haplochromis_burtoni
ENSSTOG00000020510	GPATCH4	89	89.744	ENSHGLG00000011346	-	90	92.035	Heterocephalus_glaber_female
ENSSTOG00000020510	GPATCH4	89	89.744	ENSHGLG00100018277	-	98	78.169	Heterocephalus_glaber_male
ENSSTOG00000020510	GPATCH4	89	46.218	ENSHCOG00000007016	gpatch4	56	46.632	Hippocampus_comes
ENSSTOG00000020510	GPATCH4	89	53.226	ENSIPUG00000006348	gpatch4	65	48.438	Ictalurus_punctatus
ENSSTOG00000020510	GPATCH4	88	49.600	ENSKMAG00000015765	gpatch4	56	48.357	Kryptolebias_marmoratus
ENSSTOG00000020510	GPATCH4	85	48.739	ENSLBEG00000009364	-	59	47.475	Labrus_bergylta
ENSSTOG00000020510	GPATCH4	89	48.780	ENSLACG00000009700	GPATCH4	56	51.020	Latimeria_chalumnae
ENSSTOG00000020510	GPATCH4	89	43.411	ENSLOCG00000008820	gpatch4	60	42.654	Lepisosteus_oculatus
ENSSTOG00000020510	GPATCH4	100	51.044	ENSLAFG00000028327	-	99	51.395	Loxodonta_africana
ENSSTOG00000020510	GPATCH4	89	87.179	ENSMFAG00000030965	GPATCH4	82	87.179	Macaca_fascicularis
ENSSTOG00000020510	GPATCH4	89	88.034	ENSMMUG00000002624	GPATCH4	82	88.034	Macaca_mulatta
ENSSTOG00000020510	GPATCH4	89	87.179	ENSMNEG00000028844	GPATCH4	82	87.179	Macaca_nemestrina
ENSSTOG00000020510	GPATCH4	89	86.325	ENSMLEG00000037909	GPATCH4	82	86.325	Mandrillus_leucophaeus
ENSSTOG00000020510	GPATCH4	84	49.153	ENSMZEG00005017452	gpatch4	55	46.226	Maylandia_zebra
ENSSTOG00000020510	GPATCH4	87	84.211	ENSMAUG00000008406	-	93	85.714	Mesocricetus_auratus
ENSSTOG00000020510	GPATCH4	76	85.859	ENSMICG00000047155	-	88	85.859	Microcebus_murinus
ENSSTOG00000020510	GPATCH4	89	76.724	ENSMICG00000034025	-	96	76.991	Microcebus_murinus
ENSSTOG00000020510	GPATCH4	90	71.186	ENSMICG00000038615	-	98	66.154	Microcebus_murinus
ENSSTOG00000020510	GPATCH4	85	89.286	ENSMICG00000013624	GPATCH4	94	67.318	Microcebus_murinus
ENSSTOG00000020510	GPATCH4	87	83.333	ENSMOCG00000008875	-	100	83.333	Microtus_ochrogaster
ENSSTOG00000020510	GPATCH4	84	52.101	ENSMMOG00000017095	gpatch4	96	51.887	Mola_mola
ENSSTOG00000020510	GPATCH4	89	64.167	ENSMODG00000016818	-	67	66.492	Monodelphis_domestica
ENSSTOG00000020510	GPATCH4	89	63.333	ENSMODG00000014154	-	94	61.780	Monodelphis_domestica
ENSSTOG00000020510	GPATCH4	89	82.906	MGP_CAROLIEiJ_G0025152	Gpatch4	99	72.881	Mus_caroli
ENSSTOG00000020510	GPATCH4	89	82.051	ENSMUSG00000028069	Gpatch4	99	72.034	Mus_musculus
ENSSTOG00000020510	GPATCH4	89	83.761	MGP_PahariEiJ_G0026595	-	99	74.576	Mus_pahari
ENSSTOG00000020510	GPATCH4	89	82.051	MGP_SPRETEiJ_G0026093	Gpatch4	99	72.458	Mus_spretus
ENSSTOG00000020510	GPATCH4	95	81.250	ENSMLUG00000009571	GPATCH4	96	58.824	Myotis_lucifugus
ENSSTOG00000020510	GPATCH4	85	84.821	ENSNGAG00000019958	-	85	84.821	Nannospalax_galili
ENSSTOG00000020510	GPATCH4	85	88.393	ENSNLEG00000027678	GPATCH4	93	69.382	Nomascus_leucogenys
ENSSTOG00000020510	GPATCH4	85	68.468	ENSMEUG00000006861	-	69	59.574	Notamacropus_eugenii
ENSSTOG00000020510	GPATCH4	89	85.345	ENSOPRG00000000586	GPATCH4	85	60.881	Ochotona_princeps
ENSSTOG00000020510	GPATCH4	83	87.156	ENSODEG00000005222	-	95	87.156	Octodon_degus
ENSSTOG00000020510	GPATCH4	62	91.463	ENSODEG00000016849	-	75	91.463	Octodon_degus
ENSSTOG00000020510	GPATCH4	91	90.756	ENSODEG00000010437	-	100	90.756	Octodon_degus
ENSSTOG00000020510	GPATCH4	84	50.000	ENSONIG00000002261	gpatch4	54	46.262	Oreochromis_niloticus
ENSSTOG00000020510	GPATCH4	89	87.179	ENSOCUG00000025781	-	85	59.686	Oryctolagus_cuniculus
ENSSTOG00000020510	GPATCH4	78	46.154	ENSORLG00000016102	-	94	46.154	Oryzias_latipes
ENSSTOG00000020510	GPATCH4	91	42.636	ENSORLG00020013892	gpatch4	54	45.918	Oryzias_latipes_hni
ENSSTOG00000020510	GPATCH4	89	44.094	ENSORLG00015019725	gpatch4	55	47.208	Oryzias_latipes_hsok
ENSSTOG00000020510	GPATCH4	95	82.171	ENSOGAG00000006698	-	93	62.379	Otolemur_garnettii
ENSSTOG00000020510	GPATCH4	89	86.325	ENSOARG00000006123	GPATCH4	93	63.990	Ovis_aries
ENSSTOG00000020510	GPATCH4	89	88.034	ENSPPAG00000028364	-	82	88.034	Pan_paniscus
ENSSTOG00000020510	GPATCH4	85	87.500	ENSPPRG00000002106	GPATCH4	73	73.106	Panthera_pardus
ENSSTOG00000020510	GPATCH4	89	87.179	ENSPTIG00000006717	GPATCH4	84	85.470	Panthera_tigris_altaica
ENSSTOG00000020510	GPATCH4	89	88.034	ENSPTRG00000001464	GPATCH4	82	88.034	Pan_troglodytes
ENSSTOG00000020510	GPATCH4	89	88.034	ENSPANG00000018543	GPATCH4	82	88.034	Papio_anubis
ENSSTOG00000020510	GPATCH4	92	56.250	ENSPSIG00000011317	GPATCH4	72	56.311	Pelodiscus_sinensis
ENSSTOG00000020510	GPATCH4	89	44.000	ENSPMGG00000019375	-	87	44.000	Periophthalmus_magnuspinnatus
ENSSTOG00000020510	GPATCH4	82	46.218	ENSPMAG00000009175	gpatch4	67	47.959	Petromyzon_marinus
ENSSTOG00000020510	GPATCH4	89	45.312	ENSPFOG00000011835	gpatch4	55	44.131	Poecilia_formosa
ENSSTOG00000020510	GPATCH4	89	44.531	ENSPLAG00000019504	gpatch4	55	43.662	Poecilia_latipinna
ENSSTOG00000020510	GPATCH4	89	45.312	ENSPMEG00000001375	gpatch4	55	44.131	Poecilia_mexicana
ENSSTOG00000020510	GPATCH4	89	43.750	ENSPREG00000017029	gpatch4	58	43.192	Poecilia_reticulata
ENSSTOG00000020510	GPATCH4	95	83.594	ENSPPYG00000000711	-	86	68.286	Pongo_abelii
ENSSTOG00000020510	GPATCH4	89	88.889	ENSPCOG00000023130	-	76	90.179	Propithecus_coquereli
ENSSTOG00000020510	GPATCH4	89	77.778	ENSPCOG00000013948	-	89	78.740	Propithecus_coquereli
ENSSTOG00000020510	GPATCH4	84	49.153	ENSPNYG00000018461	gpatch4	85	42.405	Pundamilia_nyererei
ENSSTOG00000020510	GPATCH4	89	83.761	ENSRNOG00000018969	Gpatch4	69	70.175	Rattus_norvegicus
ENSSTOG00000020510	GPATCH4	89	88.034	ENSRBIG00000005742	GPATCH4	82	87.179	Rhinopithecus_bieti
ENSSTOG00000020510	GPATCH4	89	88.034	ENSRROG00000044157	GPATCH4	82	87.179	Rhinopithecus_roxellana
ENSSTOG00000020510	GPATCH4	89	88.889	ENSSBOG00000024840	GPATCH4	96	60.959	Saimiri_boliviensis_boliviensis
ENSSTOG00000020510	GPATCH4	86	65.517	ENSSHAG00000015436	-	68	63.874	Sarcophilus_harrisii
ENSSTOG00000020510	GPATCH4	89	45.669	ENSSDUG00000006583	gpatch4	53	45.872	Seriola_dumerili
ENSSTOG00000020510	GPATCH4	89	45.669	ENSSLDG00000012365	gpatch4	53	45.872	Seriola_lalandi_dorsalis
ENSSTOG00000020510	GPATCH4	64	52.030	ENSSARG00000008606	-	54	59.615	Sorex_araneus
ENSSTOG00000020510	GPATCH4	89	56.452	ENSSPUG00000002674	GPATCH4	66	55.838	Sphenodon_punctatus
ENSSTOG00000020510	GPATCH4	89	45.669	ENSSPAG00000011683	gpatch4	53	45.622	Stegastes_partitus
ENSSTOG00000020510	GPATCH4	95	82.812	ENSSSCG00000006481	GPATCH4	85	65.979	Sus_scrofa
ENSSTOG00000020510	GPATCH4	86	49.593	ENSTRUG00000020638	-	88	50.806	Takifugu_rubripes
ENSSTOG00000020510	GPATCH4	85	50.413	ENSTNIG00000005156	gpatch4	73	47.418	Tetraodon_nigroviridis
ENSSTOG00000020510	GPATCH4	95	79.688	ENSTTRG00000001113	GPATCH4	84	60.769	Tursiops_truncatus
ENSSTOG00000020510	GPATCH4	95	80.469	ENSUAMG00000013407	GPATCH4	87	61.757	Ursus_americanus
ENSSTOG00000020510	GPATCH4	89	85.470	ENSUMAG00000017797	GPATCH4	86	61.558	Ursus_maritimus
ENSSTOG00000020510	GPATCH4	88	83.478	ENSVVUG00000006004	-	85	83.478	Vulpes_vulpes
ENSSTOG00000020510	GPATCH4	90	72.650	ENSVVUG00000019904	-	96	72.650	Vulpes_vulpes
ENSSTOG00000020510	GPATCH4	88	50.407	ENSXETG00000020397	gpatch4	66	49.749	Xenopus_tropicalis
ENSSTOG00000020510	GPATCH4	89	46.774	ENSXCOG00000003911	gpatch4	55	44.498	Xiphophorus_couchianus
ENSSTOG00000020510	GPATCH4	89	44.531	ENSXMAG00000024520	gpatch4	56	43.662	Xiphophorus_maculatus