EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000020663 (Gene tree)
Gene ID: 101975143
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 11101 bases
Position: chrJH393412.1:956784-967884
Accession: 101975143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000016633	MBD	PF01429.19	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000024956	MBD4-201	5382	XM_013362157	ENSSTOP00000016633	561 (aa)	XP_013217611	I3MWY8
ENSSTOT00000037898	MBD4-202	534	-	ENSSTOP00000025246	177 (aa)	-	A0A287CVE4

Gene Model

Click here to download ENSSTOG00000020663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020663	MBD4	100	73.860	ENSG00000129071	MBD4	98	96.067	Homo_sapiens
ENSSTOG00000020663	MBD4	100	72.300	ENSAMEG00000004562	MBD4	99	72.300	Ailuropoda_melanoleuca
ENSSTOG00000020663	MBD4	51	62.605	ENSAPEG00000016131	mbd4	63	62.605	Amphiprion_percula
ENSSTOG00000020663	MBD4	88	45.000	ENSACAG00000014733	MBD4	90	45.000	Anolis_carolinensis
ENSSTOG00000020663	MBD4	100	67.888	ENSBTAG00000021645	MBD4	100	67.888	Bos_taurus
ENSSTOG00000020663	MBD4	100	70.209	ENSCJAG00000017293	MBD4	99	70.209	Callithrix_jacchus
ENSSTOG00000020663	MBD4	100	71.254	ENSCAFG00000004867	MBD4	99	71.254	Canis_familiaris
ENSSTOG00000020663	MBD4	100	71.254	ENSCAFG00020007082	MBD4	99	71.254	Canis_lupus_dingo
ENSSTOG00000020663	MBD4	100	67.016	ENSCHIG00000009760	MBD4	100	67.016	Capra_hircus
ENSSTOG00000020663	MBD4	100	70.261	ENSCCAG00000029796	MBD4	99	70.261	Cebus_capucinus
ENSSTOG00000020663	MBD4	100	72.711	ENSCATG00000035211	MBD4	99	72.711	Cercocebus_atys
ENSSTOG00000020663	MBD4	100	67.247	ENSCLAG00000008974	MBD4	100	67.247	Chinchilla_lanigera
ENSSTOG00000020663	MBD4	100	72.583	ENSCSAG00000009037	MBD4	99	72.583	Chlorocebus_sabaeus
ENSSTOG00000020663	MBD4	87	48.473	ENSCPBG00000014704	MBD4	89	48.473	Chrysemys_picta_bellii
ENSSTOG00000020663	MBD4	100	72.887	ENSCANG00000007120	MBD4	99	72.887	Colobus_angolensis_palliatus
ENSSTOG00000020663	MBD4	100	65.035	ENSCGRG00001003507	Mbd4	100	65.035	Cricetulus_griseus_chok1gshd
ENSSTOG00000020663	MBD4	100	65.035	ENSCGRG00000010974	Mbd4	100	65.035	Cricetulus_griseus_crigri
ENSSTOG00000020663	MBD4	100	70.351	ENSDNOG00000049619	MBD4	100	70.351	Dasypus_novemcinctus
ENSSTOG00000020663	MBD4	81	61.588	ENSDORG00000000902	-	98	60.752	Dipodomys_ordii
ENSSTOG00000020663	MBD4	100	74.346	ENSEASG00005014800	MBD4	100	74.346	Equus_asinus_asinus
ENSSTOG00000020663	MBD4	100	74.695	ENSECAG00000022106	MBD4	100	74.695	Equus_caballus
ENSSTOG00000020663	MBD4	91	60.687	ENSEEUG00000011459	MBD4	97	60.687	Erinaceus_europaeus
ENSSTOG00000020663	MBD4	100	71.728	ENSFCAG00000000083	MBD4	99	71.728	Felis_catus
ENSSTOG00000020663	MBD4	82	43.967	ENSFALG00000013663	MBD4	99	44.246	Ficedula_albicollis
ENSSTOG00000020663	MBD4	89	48.972	ENSGAGG00000018644	MBD4	91	48.972	Gopherus_agassizii
ENSSTOG00000020663	MBD4	100	72.396	ENSGGOG00000010698	MBD4	99	72.396	Gorilla_gorilla
ENSSTOG00000020663	MBD4	100	69.512	ENSHGLG00000009034	MBD4	100	69.512	Heterocephalus_glaber_female
ENSSTOG00000020663	MBD4	100	69.686	ENSHGLG00100000135	MBD4	100	69.686	Heterocephalus_glaber_male
ENSSTOG00000020663	MBD4	99	68.174	ENSLAFG00000010609	MBD4	99	68.174	Loxodonta_africana
ENSSTOG00000020663	MBD4	99	72.487	ENSMFAG00000002266	MBD4	99	72.487	Macaca_fascicularis
ENSSTOG00000020663	MBD4	99	71.304	ENSMMUG00000012723	MBD4	99	71.304	Macaca_mulatta
ENSSTOG00000020663	MBD4	96	70.902	ENSMNEG00000029752	MBD4	99	70.902	Macaca_nemestrina
ENSSTOG00000020663	MBD4	100	72.535	ENSMLEG00000024859	MBD4	99	72.535	Mandrillus_leucophaeus
ENSSTOG00000020663	MBD4	100	74.390	ENSMICG00000008022	MBD4	99	74.390	Microcebus_murinus
ENSSTOG00000020663	MBD4	68	48.974	ENSMOCG00000002466	-	95	48.974	Microtus_ochrogaster
ENSSTOG00000020663	MBD4	87	58.635	ENSMODG00000006399	-	99	58.635	Monodelphis_domestica
ENSSTOG00000020663	MBD4	100	63.700	MGP_CAROLIEiJ_G0028760	Mbd4	100	63.700	Mus_caroli
ENSSTOG00000020663	MBD4	100	63.176	ENSMUSG00000030322	Mbd4	100	63.176	Mus_musculus
ENSSTOG00000020663	MBD4	100	63.589	MGP_PahariEiJ_G0022511	-	100	63.589	Mus_pahari
ENSSTOG00000020663	MBD4	100	62.304	MGP_SPRETEiJ_G0029788	Mbd4	100	62.304	Mus_spretus
ENSSTOG00000020663	MBD4	100	71.103	ENSMPUG00000017195	MBD4	99	71.103	Mustela_putorius_furo
ENSSTOG00000020663	MBD4	95	72.212	ENSMLUG00000014766	MBD4	99	72.212	Myotis_lucifugus
ENSSTOG00000020663	MBD4	100	73.171	ENSNLEG00000005337	MBD4	99	73.171	Nomascus_leucogenys
ENSSTOG00000020663	MBD4	100	60.453	ENSOPRG00000000473	MBD4	99	60.453	Ochotona_princeps
ENSSTOG00000020663	MBD4	86	41.635	ENSONIG00000017212	mbd4	100	41.635	Oreochromis_niloticus
ENSSTOG00000020663	MBD4	71	43.552	ENSOANG00000004589	-	94	43.552	Ornithorhynchus_anatinus
ENSSTOG00000020663	MBD4	100	63.605	ENSOCUG00000013006	MBD4	99	63.605	Oryctolagus_cuniculus
ENSSTOG00000020663	MBD4	51	65.625	ENSORLG00000011049	mbd4	98	43.943	Oryzias_latipes
ENSSTOG00000020663	MBD4	53	66.071	ENSORLG00020020013	mbd4	98	43.004	Oryzias_latipes_hni
ENSSTOG00000020663	MBD4	100	68.522	ENSOGAG00000010236	MBD4	100	68.522	Otolemur_garnettii
ENSSTOG00000020663	MBD4	100	67.539	ENSOARG00000014699	MBD4	100	67.539	Ovis_aries
ENSSTOG00000020663	MBD4	100	73.684	ENSPPAG00000036528	MBD4	99	73.684	Pan_paniscus
ENSSTOG00000020663	MBD4	100	72.615	ENSPPRG00000016480	MBD4	99	72.615	Panthera_pardus
ENSSTOG00000020663	MBD4	100	72.917	ENSPTRG00000015377	MBD4	99	72.917	Pan_troglodytes
ENSSTOG00000020663	MBD4	100	72.300	ENSPANG00000015047	MBD4	99	72.300	Papio_anubis
ENSSTOG00000020663	MBD4	91	48.014	ENSPSIG00000007892	MBD4	91	48.014	Pelodiscus_sinensis
ENSSTOG00000020663	MBD4	91	59.345	ENSPEMG00000006226	Mbd4	97	59.345	Peromyscus_maniculatus_bairdii
ENSSTOG00000020663	MBD4	89	56.371	ENSPCIG00000002276	-	98	56.371	Phascolarctos_cinereus
ENSSTOG00000020663	MBD4	100	73.638	ENSPPYG00000013417	MBD4	99	73.638	Pongo_abelii
ENSSTOG00000020663	MBD4	96	66.485	ENSPCAG00000012915	MBD4	99	66.485	Procavia_capensis
ENSSTOG00000020663	MBD4	100	73.077	ENSPVAG00000005238	MBD4	99	73.077	Pteropus_vampyrus
ENSSTOG00000020663	MBD4	100	64.696	ENSRNOG00000010919	Mbd4	100	64.696	Rattus_norvegicus
ENSSTOG00000020663	MBD4	100	73.063	ENSRBIG00000027722	MBD4	99	73.063	Rhinopithecus_bieti
ENSSTOG00000020663	MBD4	100	73.063	ENSRROG00000029136	MBD4	99	73.063	Rhinopithecus_roxellana
ENSSTOG00000020663	MBD4	100	70.855	ENSSBOG00000016810	MBD4	99	70.855	Saimiri_boliviensis_boliviensis
ENSSTOG00000020663	MBD4	95	54.348	ENSSHAG00000012953	MBD4	96	54.348	Sarcophilus_harrisii
ENSSTOG00000020663	MBD4	86	43.182	ENSSFOG00015016292	mbd4	95	43.182	Scleropages_formosus
ENSSTOG00000020663	MBD4	76	37.585	ENSSLDG00000010295	MBD4	81	37.585	Seriola_lalandi_dorsalis
ENSSTOG00000020663	MBD4	81	59.914	ENSSARG00000004496	-	80	59.914	Sorex_araneus
ENSSTOG00000020663	MBD4	86	51.866	ENSSPUG00000017344	MBD4	91	51.866	Sphenodon_punctatus
ENSSTOG00000020663	MBD4	100	69.284	ENSSSCG00000033303	MBD4	100	69.284	Sus_scrofa
ENSSTOG00000020663	MBD4	86	42.200	ENSTRUG00000010124	mbd4	95	42.200	Takifugu_rubripes
ENSSTOG00000020663	MBD4	87	61.468	ENSTBEG00000003041	-	84	61.468	Tupaia_belangeri
ENSSTOG00000020663	MBD4	95	71.898	ENSTTRG00000011265	MBD4	98	71.898	Tursiops_truncatus
ENSSTOG00000020663	MBD4	87	73.600	ENSUAMG00000000814	MBD4	100	73.600	Ursus_americanus
ENSSTOG00000020663	MBD4	100	72.077	ENSUMAG00000017542	MBD4	100	72.077	Ursus_maritimus
ENSSTOG00000020663	MBD4	66	67.757	ENSVPAG00000004040	-	67	67.757	Vicugna_pacos
ENSSTOG00000020663	MBD4	100	71.254	ENSVVUG00000014222	MBD4	99	71.254	Vulpes_vulpes
ENSSTOG00000020663	MBD4	86	43.750	ENSXETG00000026622	mbd4	89	43.750	Xenopus_tropicalis