EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000020693 (Gene tree)
Gene ID: 101954898
Gene Symbol: -
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 36136 bases
Position: chrJH393301.1:9855539-9891674
Accession: 101954898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000015662	MMR_HSR1	PF01926.23	1.3e-05	1	1
ENSSTOP00000025670	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000038939	-	381	-	ENSSTOP00000028314	126 (aa)	-	A0A287D463
ENSSTOT00000031326	-	5741	XM_005322072	ENSSTOP00000025670	205 (aa)	XP_005322129	A0A287CWG7
ENSSTOT00000020292	-	609	-	ENSSTOP00000015662	202 (aa)	-	I3MU67
ENSSTOT00000031393	-	417	-	ENSSTOP00000030128	138 (aa)	-	A0A287D9A7
ENSSTOT00000040982	-	5639	-	ENSSTOP00000024458	173 (aa)	-	A0A287CT66

Gene Model

Click here to download ENSSTOG00000020693's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020693's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000020693	-	82	35.928	ENSSTOG00000012534	MRAS	80	35.928
ENSSTOG00000020693	-	84	33.526	ENSSTOG00000010962	RAB23	73	33.526
ENSSTOG00000020693	-	97	34.434	ENSSTOG00000008444	RAB36	79	34.434
ENSSTOG00000020693	-	62	32.283	ENSSTOG00000005161	ARL4A	62	32.283
ENSSTOG00000020693	-	76	35.897	ENSSTOG00000002723	-	67	35.897
ENSSTOG00000020693	-	81	50.610	ENSSTOG00000020966	RAB30	82	50.602
ENSSTOG00000020693	-	78	40.491	ENSSTOG00000025062	RAB34	62	40.491
ENSSTOG00000020693	-	58	31.356	ENSSTOG00000009294	ARL8B	61	31.356
ENSSTOG00000020693	-	100	45.581	ENSSTOG00000031571	RAB11B	99	45.581
ENSSTOG00000020693	-	96	43.590	ENSSTOG00000006620	RAB5C	89	43.590
ENSSTOG00000020693	-	84	57.988	ENSSTOG00000011222	-	83	58.580
ENSSTOG00000020693	-	96	45.361	ENSSTOG00000014560	-	93	45.361
ENSSTOG00000020693	-	99	93.069	ENSSTOG00000011052	RAB1B	100	93.069
ENSSTOG00000020693	-	97	46.465	ENSSTOG00000001886	RAB2B	99	46.465
ENSSTOG00000020693	-	82	38.235	ENSSTOG00000028487	RAB7A	82	38.235
ENSSTOG00000020693	-	81	37.805	ENSSTOG00000009530	KRAS	95	35.912
ENSSTOG00000020693	-	69	30.405	ENSSTOG00000000518	ARL4D	73	30.405
ENSSTOG00000020693	-	67	32.667	ENSSTOG00000011978	ARFRP1	69	32.667
ENSSTOG00000020693	-	72	30.137	ENSSTOG00000014453	ARL3	75	30.137
ENSSTOG00000020693	-	58	32.231	ENSSTOG00000025524	ARL2	61	32.231
ENSSTOG00000020693	-	84	44.000	ENSSTOG00000027511	RAB33B	76	44.000
ENSSTOG00000020693	-	82	34.706	ENSSTOG00000028430	ERAS	71	34.706
ENSSTOG00000020693	-	83	49.704	ENSSTOG00000025122	RAB12	83	46.032
ENSSTOG00000020693	-	81	38.415	ENSSTOG00000023151	NRAS	86	38.415
ENSSTOG00000020693	-	77	39.623	ENSSTOG00000004081	RAB9B	79	39.623
ENSSTOG00000020693	-	89	33.514	ENSSTOG00000023505	RERG	90	33.514
ENSSTOG00000020693	-	81	46.386	ENSSTOG00000000634	RAB25	78	46.386
ENSSTOG00000020693	-	85	35.028	ENSSTOG00000021206	HRAS	93	35.028
ENSSTOG00000020693	-	58	31.092	ENSSTOG00000023217	ARL4C	61	31.092
ENSSTOG00000020693	-	96	36.410	ENSSTOG00000014123	RAB6B	94	36.410
ENSSTOG00000020693	-	77	38.994	ENSSTOG00000024550	RAB9A	79	38.994
ENSSTOG00000020693	-	96	43.367	ENSSTOG00000026229	RAB5A	90	43.367
ENSSTOG00000020693	-	96	43.814	ENSSTOG00000010536	RAB5B	90	43.814
ENSSTOG00000020693	-	86	43.820	ENSSTOG00000011237	RAB39B	84	43.820
ENSSTOG00000020693	-	58	34.746	ENSSTOG00000013990	-	61	34.746
ENSSTOG00000020693	-	84	42.697	ENSSTOG00000000084	-	81	42.697
ENSSTOG00000020693	-	98	46.829	ENSSTOG00000015255	RAB11A	95	46.829
ENSSTOG00000020693	-	82	50.303	ENSSTOG00000000861	RAB15	78	50.909
ENSSTOG00000020693	-	57	36.441	ENSSTOG00000003371	ARL14	58	36.441
ENSSTOG00000020693	-	96	38.384	ENSSTOG00000023497	RAB6A	94	38.384
ENSSTOG00000020693	-	81	47.619	ENSSTOG00000008386	RAB33A	71	47.619
ENSSTOG00000020693	-	83	32.544	ENSSTOG00000004544	RHEB	91	32.544
ENSSTOG00000020693	-	99	44.554	ENSSTOG00000025248	RAB14	93	44.554

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020693	-	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSSTOG00000020693	-	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSSTOG00000020693	-	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSSTOG00000020693	-	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSSTOG00000020693	-	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSSTOG00000020693	-	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSSTOG00000020693	-	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSSTOG00000020693	-	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSSTOG00000020693	-	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSSTOG00000020693	-	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSSTOG00000020693	-	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSSTOG00000020693	-	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSSTOG00000020693	-	99	98.995	ENSCHIG00000014060	RAB1A	96	100.000	Capra_hircus
ENSSTOG00000020693	-	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSSTOG00000020693	-	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSSTOG00000020693	-	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSSTOG00000020693	-	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSSTOG00000020693	-	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSSTOG00000020693	-	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSSTOG00000020693	-	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSSTOG00000020693	-	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSSTOG00000020693	-	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSSTOG00000020693	-	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSSTOG00000020693	-	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSSTOG00000020693	-	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSSTOG00000020693	-	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSSTOG00000020693	-	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSSTOG00000020693	-	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSSTOG00000020693	-	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSSTOG00000020693	-	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSSTOG00000020693	-	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSSTOG00000020693	-	100	98.030	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSSTOG00000020693	-	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSSTOG00000020693	-	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSSTOG00000020693	-	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSSTOG00000020693	-	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSSTOG00000020693	-	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSSTOG00000020693	-	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSSTOG00000020693	-	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSSTOG00000020693	-	98	99.495	ENSHGLG00100007994	RAB1A	99	97.549	Heterocephalus_glaber_male
ENSSTOG00000020693	-	98	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSSTOG00000020693	-	98	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSSTOG00000020693	-	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSSTOG00000020693	-	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSSTOG00000020693	-	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSSTOG00000020693	-	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSSTOG00000020693	-	98	99.495	ENSMMUG00000021721	RAB1A	92	99.495	Macaca_mulatta
ENSSTOG00000020693	-	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSSTOG00000020693	-	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSSTOG00000020693	-	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSSTOG00000020693	-	100	97.525	ENSMGAG00000004611	RAB1A	100	97.525	Meleagris_gallopavo
ENSSTOG00000020693	-	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSSTOG00000020693	-	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSSTOG00000020693	-	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSSTOG00000020693	-	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSSTOG00000020693	-	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSSTOG00000020693	-	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSSTOG00000020693	-	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSSTOG00000020693	-	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSSTOG00000020693	-	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSSTOG00000020693	-	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSSTOG00000020693	-	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSSTOG00000020693	-	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSSTOG00000020693	-	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSSTOG00000020693	-	98	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSSTOG00000020693	-	95	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSSTOG00000020693	-	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSSTOG00000020693	-	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSSTOG00000020693	-	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSSTOG00000020693	-	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSSTOG00000020693	-	98	99.495	ENSOARG00000019997	RAB1A	98	99.495	Ovis_aries
ENSSTOG00000020693	-	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSSTOG00000020693	-	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSSTOG00000020693	-	98	99.495	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSSTOG00000020693	-	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSSTOG00000020693	-	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSSTOG00000020693	-	98	98.990	ENSPSIG00000008028	RAB1A	97	98.990	Pelodiscus_sinensis
ENSSTOG00000020693	-	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSSTOG00000020693	-	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSSTOG00000020693	-	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSSTOG00000020693	-	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSSTOG00000020693	-	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSSTOG00000020693	-	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSSTOG00000020693	-	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSSTOG00000020693	-	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSSTOG00000020693	-	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSSTOG00000020693	-	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSSTOG00000020693	-	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000020693	-	99	98.995	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSSTOG00000020693	-	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSSTOG00000020693	-	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSSTOG00000020693	-	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSSTOG00000020693	-	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSSTOG00000020693	-	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSSTOG00000020693	-	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSSTOG00000020693	-	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSSTOG00000020693	-	99	99.000	ENSUMAG00000021038	RAB1A	100	99.000	Ursus_maritimus
ENSSTOG00000020693	-	98	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSSTOG00000020693	-	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSSTOG00000020693	-	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus