EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000020707 (Gene tree)
Gene ID: 101975092
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 20157 bases
Position: chrJH393565.1:491656-511812
Accession: 101975092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000019552	zf-C2H2	PF00096.26	1.9e-26	1	5
ENSSTOP00000019552	zf-C2H2	PF00096.26	1.9e-26	2	5
ENSSTOP00000019552	zf-C2H2	PF00096.26	1.9e-26	3	5
ENSSTOP00000019552	zf-C2H2	PF00096.26	1.9e-26	4	5
ENSSTOP00000019552	zf-C2H2	PF00096.26	1.9e-26	5	5
ENSSTOP00000031193	zf-C2H2	PF00096.26	3.9e-20	1	4
ENSSTOP00000031193	zf-C2H2	PF00096.26	3.9e-20	2	4
ENSSTOP00000031193	zf-C2H2	PF00096.26	3.9e-20	3	4
ENSSTOP00000031193	zf-C2H2	PF00096.26	3.9e-20	4	4
ENSSTOP00000028273	zf-C2H2	PF00096.26	5.5e-15	1	3
ENSSTOP00000028273	zf-C2H2	PF00096.26	5.5e-15	2	3
ENSSTOP00000028273	zf-C2H2	PF00096.26	5.5e-15	3	3
ENSSTOP00000019552	zf-met	PF12874.7	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032252	PATZ1-203	309	-	ENSSTOP00000029846	102 (aa)	-	A0A287D8L1
ENSSTOT00000033063	PATZ1-201	3353	XM_005339862	ENSSTOP00000031193	641 (aa)	XP_005339919	A0A287DCC3
ENSSTOT00000022373	PATZ1-202	3452	XM_005339861	ENSSTOP00000019552	687 (aa)	XP_005339918	I3N5A6
ENSSTOT00000041953	PATZ1-204	210	-	ENSSTOP00000024200	70 (aa)	-	A0A287CS91
ENSSTOT00000037387	PATZ1-205	2808	XM_005339864	ENSSTOP00000028273	537 (aa)	XP_005339921	A0A287D3Z1

Gene Model

Click here to download ENSSTOG00000020707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000020707	PATZ1	61	36.076	ENSSTOG00000006365	BCL6B	57	46.429
ENSSTOG00000020707	PATZ1	59	30.286	ENSSTOG00000033893	-	72	40.449
ENSSTOG00000020707	PATZ1	51	34.483	ENSSTOG00000028612	ZNF574	52	32.240
ENSSTOG00000020707	PATZ1	68	37.079	ENSSTOG00000003116	ZBTB47	57	40.506
ENSSTOG00000020707	PATZ1	88	32.051	ENSSTOG00000004642	MYNN	86	38.235
ENSSTOG00000020707	PATZ1	55	30.612	ENSSTOG00000019944	ZNF319	79	30.612
ENSSTOG00000020707	PATZ1	50	33.880	ENSSTOG00000000130	ZNF691	73	41.772
ENSSTOG00000020707	PATZ1	72	32.819	ENSSTOG00000013458	ZNF112	62	47.368
ENSSTOG00000020707	PATZ1	52	31.628	ENSSTOG00000034297	-	63	41.584
ENSSTOG00000020707	PATZ1	82	37.895	ENSSTOG00000010216	ZBTB14	57	38.889
ENSSTOG00000020707	PATZ1	53	40.650	ENSSTOG00000004741	PRDM5	86	40.650
ENSSTOG00000020707	PATZ1	50	36.471	ENSSTOG00000006987	ZNF236	57	36.207
ENSSTOG00000020707	PATZ1	56	32.468	ENSSTOG00000030417	-	76	43.820
ENSSTOG00000020707	PATZ1	77	30.435	ENSSTOG00000023536	-	89	33.520
ENSSTOG00000020707	PATZ1	53	33.529	ENSSTOG00000022317	ZFP1	60	38.636
ENSSTOG00000020707	PATZ1	53	35.185	ENSSTOG00000034090	ZNF226	67	37.419
ENSSTOG00000020707	PATZ1	70	32.278	ENSSTOG00000011460	ZBTB24	53	39.773
ENSSTOG00000020707	PATZ1	55	33.168	ENSSTOG00000024118	-	84	33.168
ENSSTOG00000020707	PATZ1	53	39.024	ENSSTOG00000026126	ZNF628	54	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020707	PATZ1	100	99.127	ENSG00000100105	PATZ1	100	99.127	Homo_sapiens
ENSSTOG00000020707	PATZ1	99	59.924	ENSAPOG00000018447	patz1	100	59.138	Acanthochromis_polyacanthus
ENSSTOG00000020707	PATZ1	100	99.418	ENSAMEG00000007074	PATZ1	100	99.418	Ailuropoda_melanoleuca
ENSSTOG00000020707	PATZ1	100	60.039	ENSACIG00000016779	patz1	100	59.768	Amphilophus_citrinellus
ENSSTOG00000020707	PATZ1	100	57.423	ENSAPEG00000013354	patz1	100	57.563	Amphiprion_percula
ENSSTOG00000020707	PATZ1	100	62.157	ENSATEG00000011260	patz1	100	61.961	Anabas_testudineus
ENSSTOG00000020707	PATZ1	85	91.781	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
ENSSTOG00000020707	PATZ1	100	99.127	ENSANAG00000029603	PATZ1	100	99.127	Aotus_nancymaae
ENSSTOG00000020707	PATZ1	97	62.712	ENSAMXG00000002273	patz1	98	62.335	Astyanax_mexicanus
ENSSTOG00000020707	PATZ1	100	99.532	ENSBTAG00000005478	PATZ1	100	99.532	Bos_taurus
ENSSTOG00000020707	PATZ1	100	99.127	ENSCJAG00000010978	PATZ1	100	99.127	Callithrix_jacchus
ENSSTOG00000020707	PATZ1	100	99.688	ENSCAFG00000013087	PATZ1	100	99.563	Canis_familiaris
ENSSTOG00000020707	PATZ1	100	99.064	ENSCHIG00000020203	PATZ1	100	99.064	Capra_hircus
ENSSTOG00000020707	PATZ1	100	98.908	ENSTSYG00000033183	PATZ1	100	98.908	Carlito_syrichta
ENSSTOG00000020707	PATZ1	100	99.127	ENSCCAG00000028772	PATZ1	100	99.127	Cebus_capucinus
ENSSTOG00000020707	PATZ1	100	99.127	ENSCATG00000006101	PATZ1	100	99.127	Cercocebus_atys
ENSSTOG00000020707	PATZ1	100	89.130	ENSCPBG00000011277	PATZ1	100	88.116	Chrysemys_picta_bellii
ENSSTOG00000020707	PATZ1	100	99.127	ENSCANG00000024972	PATZ1	100	99.127	Colobus_angolensis_palliatus
ENSSTOG00000020707	PATZ1	100	96.943	ENSCGRG00001004071	Patz1	100	96.943	Cricetulus_griseus_chok1gshd
ENSSTOG00000020707	PATZ1	93	97.667	ENSCGRG00000004814	Patz1	100	97.667	Cricetulus_griseus_crigri
ENSSTOG00000020707	PATZ1	100	54.965	ENSCSEG00000001385	patz1	100	55.000	Cynoglossus_semilaevis
ENSSTOG00000020707	PATZ1	100	58.850	ENSCVAG00000007684	patz1	100	58.641	Cyprinodon_variegatus
ENSSTOG00000020707	PATZ1	97	60.757	ENSDARG00000076584	patz1	98	58.967	Danio_rerio
ENSSTOG00000020707	PATZ1	90	98.869	ENSDNOG00000003183	PATZ1	100	98.869	Dasypus_novemcinctus
ENSSTOG00000020707	PATZ1	100	99.376	ENSDORG00000023834	Patz1	100	99.376	Dipodomys_ordii
ENSSTOG00000020707	PATZ1	100	99.220	ENSECAG00000025030	PATZ1	100	99.220	Equus_caballus
ENSSTOG00000020707	PATZ1	99	62.075	ENSELUG00000002333	patz1	100	58.166	Esox_lucius
ENSSTOG00000020707	PATZ1	100	99.688	ENSFCAG00000030253	PATZ1	100	99.688	Felis_catus
ENSSTOG00000020707	PATZ1	86	92.034	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSSTOG00000020707	PATZ1	96	97.076	ENSFDAG00000005614	PATZ1	100	97.076	Fukomys_damarensis
ENSSTOG00000020707	PATZ1	100	57.625	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSSTOG00000020707	PATZ1	98	55.091	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSSTOG00000020707	PATZ1	100	88.633	ENSGALG00000006934	PATZ1	100	87.914	Gallus_gallus
ENSSTOG00000020707	PATZ1	100	58.835	ENSGAFG00000010053	patz1	100	57.709	Gambusia_affinis
ENSSTOG00000020707	PATZ1	85	91.938	ENSGAGG00000003214	PATZ1	100	90.909	Gopherus_agassizii
ENSSTOG00000020707	PATZ1	100	99.272	ENSGGOG00000017171	PATZ1	100	99.272	Gorilla_gorilla
ENSSTOG00000020707	PATZ1	98	62.846	ENSHCOG00000017644	patz1	98	61.372	Hippocampus_comes
ENSSTOG00000020707	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	59.756	Ictalurus_punctatus
ENSSTOG00000020707	PATZ1	100	96.517	ENSJJAG00000015259	Patz1	100	96.517	Jaculus_jaculus
ENSSTOG00000020707	PATZ1	100	57.528	ENSKMAG00000008157	patz1	100	57.486	Kryptolebias_marmoratus
ENSSTOG00000020707	PATZ1	100	98.836	ENSLAFG00000002317	PATZ1	100	98.836	Loxodonta_africana
ENSSTOG00000020707	PATZ1	100	98.981	ENSMFAG00000040968	PATZ1	100	98.981	Macaca_fascicularis
ENSSTOG00000020707	PATZ1	100	98.981	ENSMNEG00000037588	PATZ1	100	98.981	Macaca_nemestrina
ENSSTOG00000020707	PATZ1	100	99.127	ENSMLEG00000030938	PATZ1	100	99.127	Mandrillus_leucophaeus
ENSSTOG00000020707	PATZ1	100	57.331	ENSMAMG00000023652	patz1	100	57.478	Mastacembelus_armatus
ENSSTOG00000020707	PATZ1	85	87.863	ENSMGAG00000008439	PATZ1	100	86.838	Meleagris_gallopavo
ENSSTOG00000020707	PATZ1	100	98.690	ENSMAUG00000004129	Patz1	100	98.690	Mesocricetus_auratus
ENSSTOG00000020707	PATZ1	100	98.908	ENSMICG00000005430	PATZ1	100	98.908	Microcebus_murinus
ENSSTOG00000020707	PATZ1	100	98.690	ENSMOCG00000014488	Patz1	100	98.690	Microtus_ochrogaster
ENSSTOG00000020707	PATZ1	99	55.078	ENSMMOG00000021679	patz1	100	48.271	Mola_mola
ENSSTOG00000020707	PATZ1	100	56.962	ENSMALG00000021172	patz1	100	56.577	Monopterus_albus
ENSSTOG00000020707	PATZ1	100	98.544	MGP_CAROLIEiJ_G0016007	Patz1	100	98.544	Mus_caroli
ENSSTOG00000020707	PATZ1	100	98.690	ENSMUSG00000020453	Patz1	100	98.690	Mus_musculus
ENSSTOG00000020707	PATZ1	100	98.690	MGP_PahariEiJ_G0016884	Patz1	100	98.690	Mus_pahari
ENSSTOG00000020707	PATZ1	100	98.690	MGP_SPRETEiJ_G0016846	Patz1	100	98.690	Mus_spretus
ENSSTOG00000020707	PATZ1	100	99.376	ENSMLUG00000009942	PATZ1	100	99.376	Myotis_lucifugus
ENSSTOG00000020707	PATZ1	100	98.981	ENSNGAG00000010268	Patz1	100	98.981	Nannospalax_galili
ENSSTOG00000020707	PATZ1	100	59.846	ENSNBRG00000016032	patz1	100	59.574	Neolamprologus_brichardi
ENSSTOG00000020707	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSSTOG00000020707	PATZ1	100	98.440	ENSODEG00000003589	PATZ1	100	98.440	Octodon_degus
ENSSTOG00000020707	PATZ1	100	58.626	ENSONIG00000004248	patz1	100	58.419	Oreochromis_niloticus
ENSSTOG00000020707	PATZ1	100	93.324	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSSTOG00000020707	PATZ1	100	58.636	ENSORLG00020010937	patz1	100	58.485	Oryzias_latipes_hni
ENSSTOG00000020707	PATZ1	100	58.017	ENSORLG00015007396	patz1	100	57.872	Oryzias_latipes_hsok
ENSSTOG00000020707	PATZ1	100	57.312	ENSOMEG00000006636	patz1	100	57.312	Oryzias_melastigma
ENSSTOG00000020707	PATZ1	100	98.981	ENSOGAG00000027905	PATZ1	100	98.981	Otolemur_garnettii
ENSSTOG00000020707	PATZ1	100	99.272	ENSPPAG00000033227	PATZ1	100	99.272	Pan_paniscus
ENSSTOG00000020707	PATZ1	100	99.688	ENSPPRG00000001573	PATZ1	100	99.688	Panthera_pardus
ENSSTOG00000020707	PATZ1	86	99.494	ENSPTIG00000007937	PATZ1	91	99.494	Panthera_tigris_altaica
ENSSTOG00000020707	PATZ1	100	99.272	ENSPTRG00000014268	PATZ1	100	99.272	Pan_troglodytes
ENSSTOG00000020707	PATZ1	100	99.127	ENSPANG00000006821	PATZ1	100	99.127	Papio_anubis
ENSSTOG00000020707	PATZ1	100	62.127	ENSPKIG00000019584	patz1	100	61.567	Paramormyrops_kingsleyae
ENSSTOG00000020707	PATZ1	58	95.707	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSSTOG00000020707	PATZ1	60	83.293	ENSPSIG00000016553	-	91	82.567	Pelodiscus_sinensis
ENSSTOG00000020707	PATZ1	100	57.163	ENSPMGG00000010196	patz1	100	57.163	Periophthalmus_magnuspinnatus
ENSSTOG00000020707	PATZ1	100	98.908	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSSTOG00000020707	PATZ1	100	57.331	ENSPLAG00000010425	patz1	100	57.478	Poecilia_latipinna
ENSSTOG00000020707	PATZ1	100	57.416	ENSPMEG00000000255	patz1	100	57.562	Poecilia_mexicana
ENSSTOG00000020707	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	56.790	Poecilia_reticulata
ENSSTOG00000020707	PATZ1	100	98.981	ENSPPYG00000011732	PATZ1	100	98.981	Pongo_abelii
ENSSTOG00000020707	PATZ1	100	98.752	ENSPCOG00000019729	PATZ1	100	98.752	Propithecus_coquereli
ENSSTOG00000020707	PATZ1	100	99.418	ENSPVAG00000001749	PATZ1	100	99.418	Pteropus_vampyrus
ENSSTOG00000020707	PATZ1	100	58.964	ENSPNYG00000013542	patz1	100	58.766	Pundamilia_nyererei
ENSSTOG00000020707	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSSTOG00000020707	PATZ1	100	99.127	ENSRBIG00000044231	PATZ1	100	99.127	Rhinopithecus_bieti
ENSSTOG00000020707	PATZ1	100	99.127	ENSRROG00000037155	PATZ1	100	99.127	Rhinopithecus_roxellana
ENSSTOG00000020707	PATZ1	100	99.127	ENSSBOG00000003894	PATZ1	100	99.127	Saimiri_boliviensis_boliviensis
ENSSTOG00000020707	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSSTOG00000020707	PATZ1	100	86.913	ENSSPUG00000015298	PATZ1	100	86.060	Sphenodon_punctatus
ENSSTOG00000020707	PATZ1	85	98.969	ENSSSCG00000010027	PATZ1	100	99.067	Sus_scrofa
ENSSTOG00000020707	PATZ1	100	57.538	ENSTRUG00000015366	patz1	100	57.538	Takifugu_rubripes
ENSSTOG00000020707	PATZ1	100	99.418	ENSTTRG00000010279	PATZ1	100	99.418	Tursiops_truncatus
ENSSTOG00000020707	PATZ1	100	99.688	ENSUAMG00000015014	PATZ1	100	99.688	Ursus_americanus
ENSSTOG00000020707	PATZ1	100	73.043	ENSXETG00000004190	patz1	100	72.319	Xenopus_tropicalis
ENSSTOG00000020707	PATZ1	100	57.709	ENSXMAG00000015531	patz1	100	57.856	Xiphophorus_maculatus