EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000020712 (Gene tree)
Gene ID: 101970777
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 57045 bases
Position: chrJH393279.1:26048953-26105997
Accession: 101970777
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000015314	Rif1_N	PF12231.8	1.5e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027615	RIF1-201	7594	XM_005315807	ENSSTOP00000015314	2480 (aa)	XP_005315864	I3MT69

Gene Model

Click here to download ENSSTOG00000020712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020712	RIF1	100	77.773	ENSG00000080345	RIF1	97	89.525	Homo_sapiens
ENSSTOG00000020712	RIF1	52	48.106	ENSAPOG00000011073	rif1	50	48.913	Acanthochromis_polyacanthus
ENSSTOG00000020712	RIF1	99	78.161	ENSAMEG00000008461	RIF1	100	78.041	Ailuropoda_melanoleuca
ENSSTOG00000020712	RIF1	65	50.537	ENSACIG00000017765	rif1	71	50.114	Amphilophus_citrinellus
ENSSTOG00000020712	RIF1	69	47.523	ENSAOCG00000017231	rif1	55	46.855	Amphiprion_ocellaris
ENSSTOG00000020712	RIF1	69	54.722	ENSAPEG00000013228	rif1	50	53.783	Amphiprion_percula
ENSSTOG00000020712	RIF1	78	42.310	ENSATEG00000022887	rif1	66	50.842	Anabas_testudineus
ENSSTOG00000020712	RIF1	83	65.015	ENSAPLG00000007092	RIF1	92	64.723	Anas_platyrhynchos
ENSSTOG00000020712	RIF1	83	58.997	ENSACAG00000003714	RIF1	89	58.997	Anolis_carolinensis
ENSSTOG00000020712	RIF1	100	77.457	ENSANAG00000024840	RIF1	100	77.497	Aotus_nancymaae
ENSSTOG00000020712	RIF1	73	48.293	ENSAMXG00000010910	rif1	68	52.829	Astyanax_mexicanus
ENSSTOG00000020712	RIF1	94	76.055	ENSBTAG00000021020	RIF1	99	88.325	Bos_taurus
ENSSTOG00000020712	RIF1	100	76.423	ENSCJAG00000003138	RIF1	100	76.464	Callithrix_jacchus
ENSSTOG00000020712	RIF1	100	76.421	ENSCAFG00000005670	RIF1	97	76.230	Canis_familiaris
ENSSTOG00000020712	RIF1	100	75.722	ENSCAFG00020016401	RIF1	100	75.531	Canis_lupus_dingo
ENSSTOG00000020712	RIF1	100	76.332	ENSCHIG00000020327	RIF1	100	76.252	Capra_hircus
ENSSTOG00000020712	RIF1	99	75.210	ENSTSYG00000008861	RIF1	100	75.140	Carlito_syrichta
ENSSTOG00000020712	RIF1	79	83.721	ENSCAPG00000008957	RIF1	95	83.721	Cavia_aperea
ENSSTOG00000020712	RIF1	99	72.191	ENSCPOG00000037898	RIF1	99	72.300	Cavia_porcellus
ENSSTOG00000020712	RIF1	100	76.143	ENSCCAG00000024760	RIF1	100	76.143	Cebus_capucinus
ENSSTOG00000020712	RIF1	100	77.635	ENSCATG00000033353	RIF1	100	77.675	Cercocebus_atys
ENSSTOG00000020712	RIF1	96	74.302	ENSCLAG00000001517	RIF1	99	74.302	Chinchilla_lanigera
ENSSTOG00000020712	RIF1	100	77.635	ENSCSAG00000016089	RIF1	100	77.675	Chlorocebus_sabaeus
ENSSTOG00000020712	RIF1	97	76.957	ENSCHOG00000007187	RIF1	97	76.957	Choloepus_hoffmanni
ENSSTOG00000020712	RIF1	89	68.873	ENSCPBG00000025885	RIF1	99	67.612	Chrysemys_picta_bellii
ENSSTOG00000020712	RIF1	100	76.021	ENSCANG00000028962	RIF1	100	77.020	Colobus_angolensis_palliatus
ENSSTOG00000020712	RIF1	99	71.572	ENSCGRG00001024589	Rif1	100	71.572	Cricetulus_griseus_chok1gshd
ENSSTOG00000020712	RIF1	99	72.753	ENSCGRG00000010713	Rif1	100	72.753	Cricetulus_griseus_crigri
ENSSTOG00000020712	RIF1	62	55.686	ENSCSEG00000003945	rif1	67	55.686	Cynoglossus_semilaevis
ENSSTOG00000020712	RIF1	63	48.439	ENSCVAG00000022479	rif1	67	48.439	Cyprinodon_variegatus
ENSSTOG00000020712	RIF1	100	75.010	ENSDNOG00000011194	RIF1	97	74.930	Dasypus_novemcinctus
ENSSTOG00000020712	RIF1	92	71.991	ENSETEG00000012421	RIF1	92	71.915	Echinops_telfairi
ENSSTOG00000020712	RIF1	96	87.342	ENSEASG00005023434	RIF1	99	87.342	Equus_asinus_asinus
ENSSTOG00000020712	RIF1	97	90.318	ENSECAG00000012679	RIF1	100	90.318	Equus_caballus
ENSSTOG00000020712	RIF1	65	49.071	ENSELUG00000006826	rif1	56	50.675	Esox_lucius
ENSSTOG00000020712	RIF1	100	77.462	ENSFCAG00000029742	RIF1	100	77.262	Felis_catus
ENSSTOG00000020712	RIF1	77	63.415	ENSFALG00000013874	RIF1	98	51.566	Ficedula_albicollis
ENSSTOG00000020712	RIF1	99	75.392	ENSFDAG00000006538	RIF1	99	75.382	Fukomys_damarensis
ENSSTOG00000020712	RIF1	62	50.768	ENSFHEG00000013721	rif1	66	50.721	Fundulus_heteroclitus
ENSSTOG00000020712	RIF1	54	51.587	ENSGMOG00000003517	rif1	81	49.878	Gadus_morhua
ENSSTOG00000020712	RIF1	80	56.039	ENSGALG00000012484	RIF1	93	55.797	Gallus_gallus
ENSSTOG00000020712	RIF1	65	51.397	ENSGAFG00000017196	rif1	69	54.798	Gambusia_affinis
ENSSTOG00000020712	RIF1	59	54.583	ENSGACG00000008579	rif1	65	53.279	Gasterosteus_aculeatus
ENSSTOG00000020712	RIF1	89	71.257	ENSGAGG00000012595	RIF1	97	71.772	Gopherus_agassizii
ENSSTOG00000020712	RIF1	90	90.258	ENSGGOG00000040178	RIF1	96	90.258	Gorilla_gorilla
ENSSTOG00000020712	RIF1	73	55.823	ENSHBUG00000007125	rif1	70	53.543	Haplochromis_burtoni
ENSSTOG00000020712	RIF1	95	75.499	ENSHGLG00100009807	RIF1	99	75.552	Heterocephalus_glaber_male
ENSSTOG00000020712	RIF1	69	49.562	ENSHCOG00000015943	rif1	66	49.483	Hippocampus_comes
ENSSTOG00000020712	RIF1	99	70.602	ENSJJAG00000023000	Rif1	100	70.402	Jaculus_jaculus
ENSSTOG00000020712	RIF1	64	50.313	ENSKMAG00000002852	rif1	67	50.591	Kryptolebias_marmoratus
ENSSTOG00000020712	RIF1	62	52.397	ENSLBEG00000023196	rif1	57	51.458	Labrus_bergylta
ENSSTOG00000020712	RIF1	84	63.690	ENSLACG00000005425	RIF1	89	63.690	Latimeria_chalumnae
ENSSTOG00000020712	RIF1	63	54.212	ENSLOCG00000002657	rif1	82	50.000	Lepisosteus_oculatus
ENSSTOG00000020712	RIF1	99	75.592	ENSLAFG00000009796	RIF1	100	75.482	Loxodonta_africana
ENSSTOG00000020712	RIF1	100	77.715	ENSMFAG00000032233	RIF1	100	77.756	Macaca_fascicularis
ENSSTOG00000020712	RIF1	100	77.675	ENSMMUG00000008611	RIF1	100	77.715	Macaca_mulatta
ENSSTOG00000020712	RIF1	100	77.515	ENSMNEG00000031616	RIF1	100	77.555	Macaca_nemestrina
ENSSTOG00000020712	RIF1	100	77.675	ENSMLEG00000042945	RIF1	100	77.715	Mandrillus_leucophaeus
ENSSTOG00000020712	RIF1	66	48.773	ENSMAMG00000001745	rif1	65	49.880	Mastacembelus_armatus
ENSSTOG00000020712	RIF1	69	50.073	ENSMZEG00005020920	rif1	76	49.459	Maylandia_zebra
ENSSTOG00000020712	RIF1	82	58.904	ENSMGAG00000012732	RIF1	90	58.840	Meleagris_gallopavo
ENSSTOG00000020712	RIF1	95	90.529	ENSMAUG00000013158	Rif1	99	90.529	Mesocricetus_auratus
ENSSTOG00000020712	RIF1	100	79.479	ENSMICG00000046127	RIF1	100	79.399	Microcebus_murinus
ENSSTOG00000020712	RIF1	99	70.986	ENSMOCG00000009381	Rif1	100	70.986	Microtus_ochrogaster
ENSSTOG00000020712	RIF1	62	50.325	ENSMMOG00000006519	rif1	64	49.102	Mola_mola
ENSSTOG00000020712	RIF1	58	52.018	ENSMALG00000016759	rif1	66	52.299	Monopterus_albus
ENSSTOG00000020712	RIF1	99	70.475	MGP_CAROLIEiJ_G0023555	Rif1	100	70.475	Mus_caroli
ENSSTOG00000020712	RIF1	99	71.314	ENSMUSG00000036202	Rif1	100	71.314	Mus_musculus
ENSSTOG00000020712	RIF1	99	70.125	MGP_PahariEiJ_G0025006	Rif1	100	70.084	Mus_pahari
ENSSTOG00000020712	RIF1	99	70.954	MGP_SPRETEiJ_G0024476	Rif1	100	70.913	Mus_spretus
ENSSTOG00000020712	RIF1	100	76.522	ENSMPUG00000000371	RIF1	100	76.412	Mustela_putorius_furo
ENSSTOG00000020712	RIF1	90	74.389	ENSMLUG00000003376	RIF1	100	74.255	Myotis_lucifugus
ENSSTOG00000020712	RIF1	100	72.884	ENSNGAG00000009268	Rif1	100	73.242	Nannospalax_galili
ENSSTOG00000020712	RIF1	77	44.444	ENSNBRG00000014257	rif1	76	48.787	Neolamprologus_brichardi
ENSSTOG00000020712	RIF1	100	75.868	ENSNLEG00000010955	RIF1	100	76.018	Nomascus_leucogenys
ENSSTOG00000020712	RIF1	74	76.786	ENSMEUG00000007601	-	81	76.786	Notamacropus_eugenii
ENSSTOG00000020712	RIF1	99	72.048	ENSODEG00000003950	RIF1	99	72.224	Octodon_degus
ENSSTOG00000020712	RIF1	77	45.989	ENSONIG00000013657	rif1	70	50.912	Oreochromis_niloticus
ENSSTOG00000020712	RIF1	71	75.518	ENSOANG00000006078	-	75	75.518	Ornithorhynchus_anatinus
ENSSTOG00000020712	RIF1	100	75.974	ENSOCUG00000017435	RIF1	100	75.934	Oryctolagus_cuniculus
ENSSTOG00000020712	RIF1	62	48.960	ENSORLG00020001302	rif1	68	49.120	Oryzias_latipes_hni
ENSSTOG00000020712	RIF1	62	49.120	ENSORLG00015000009	rif1	67	48.502	Oryzias_latipes_hsok
ENSSTOG00000020712	RIF1	71	48.923	ENSOMEG00000021513	rif1	81	48.311	Oryzias_melastigma
ENSSTOG00000020712	RIF1	99	76.846	ENSOGAG00000006141	RIF1	99	76.806	Otolemur_garnettii
ENSSTOG00000020712	RIF1	100	76.723	ENSOARG00000008930	RIF1	100	76.643	Ovis_aries
ENSSTOG00000020712	RIF1	100	77.885	ENSPPAG00000023754	RIF1	100	77.885	Pan_paniscus
ENSSTOG00000020712	RIF1	100	77.502	ENSPPRG00000003618	RIF1	100	77.351	Panthera_pardus
ENSSTOG00000020712	RIF1	100	77.462	ENSPTIG00000020652	RIF1	100	77.351	Panthera_tigris_altaica
ENSSTOG00000020712	RIF1	100	78.005	ENSPTRG00000012534	RIF1	100	78.005	Pan_troglodytes
ENSSTOG00000020712	RIF1	100	77.595	ENSPANG00000008525	RIF1	100	77.635	Papio_anubis
ENSSTOG00000020712	RIF1	73	51.360	ENSPKIG00000004267	rif1	67	52.577	Paramormyrops_kingsleyae
ENSSTOG00000020712	RIF1	65	45.447	ENSPMGG00000016141	rif1	85	45.118	Periophthalmus_magnuspinnatus
ENSSTOG00000020712	RIF1	99	72.994	ENSPEMG00000000446	Rif1	99	73.075	Peromyscus_maniculatus_bairdii
ENSSTOG00000020712	RIF1	90	66.667	ENSPCIG00000009185	RIF1	94	66.912	Phascolarctos_cinereus
ENSSTOG00000020712	RIF1	57	51.410	ENSPFOG00000000554	-	67	51.273	Poecilia_formosa
ENSSTOG00000020712	RIF1	63	51.453	ENSPFOG00000017804	rif1	70	51.413	Poecilia_formosa
ENSSTOG00000020712	RIF1	66	51.144	ENSPLAG00000017945	rif1	72	51.104	Poecilia_latipinna
ENSSTOG00000020712	RIF1	53	49.758	ENSPMEG00000006897	-	66	49.614	Poecilia_mexicana
ENSSTOG00000020712	RIF1	66	51.817	ENSPREG00000018052	rif1	68	54.775	Poecilia_reticulata
ENSSTOG00000020712	RIF1	100	77.595	ENSPPYG00000012846	RIF1	100	77.724	Pongo_abelii
ENSSTOG00000020712	RIF1	82	82.979	ENSPCAG00000009032	RIF1	82	82.979	Procavia_capensis
ENSSTOG00000020712	RIF1	100	79.367	ENSPCOG00000027888	RIF1	100	79.407	Propithecus_coquereli
ENSSTOG00000020712	RIF1	93	87.221	ENSPVAG00000014276	RIF1	95	87.221	Pteropus_vampyrus
ENSSTOG00000020712	RIF1	69	48.815	ENSPNYG00000012940	rif1	75	47.760	Pundamilia_nyererei
ENSSTOG00000020712	RIF1	65	52.544	ENSPNAG00000016685	rif1	65	52.838	Pygocentrus_nattereri
ENSSTOG00000020712	RIF1	99	70.301	ENSRNOG00000054901	Rif1	100	70.301	Rattus_norvegicus
ENSSTOG00000020712	RIF1	100	76.692	ENSRBIG00000003704	RIF1	100	76.803	Rhinopithecus_bieti
ENSSTOG00000020712	RIF1	100	77.453	ENSRROG00000028206	RIF1	100	77.604	Rhinopithecus_roxellana
ENSSTOG00000020712	RIF1	97	92.473	ENSSBOG00000029530	RIF1	100	92.473	Saimiri_boliviensis_boliviensis
ENSSTOG00000020712	RIF1	99	65.258	ENSSHAG00000018552	RIF1	99	65.258	Sarcophilus_harrisii
ENSSTOG00000020712	RIF1	76	51.266	ENSSFOG00015021539	rif1	84	50.949	Scleropages_formosus
ENSSTOG00000020712	RIF1	53	48.811	ENSSMAG00000011704	rif1	68	49.081	Scophthalmus_maximus
ENSSTOG00000020712	RIF1	62	51.574	ENSSDUG00000015632	rif1	68	50.472	Seriola_dumerili
ENSSTOG00000020712	RIF1	60	84.615	ENSSARG00000007161	-	61	84.615	Sorex_araneus
ENSSTOG00000020712	RIF1	85	60.988	ENSSPUG00000003062	RIF1	93	60.988	Sphenodon_punctatus
ENSSTOG00000020712	RIF1	53	57.464	ENSSPAG00000018359	rif1	80	57.464	Stegastes_partitus
ENSSTOG00000020712	RIF1	100	77.154	ENSSSCG00000016395	RIF1	100	76.732	Sus_scrofa
ENSSTOG00000020712	RIF1	64	50.273	ENSTRUG00000015808	rif1	69	50.884	Takifugu_rubripes
ENSSTOG00000020712	RIF1	63	50.888	ENSTNIG00000011538	rif1	68	49.173	Tetraodon_nigroviridis
ENSSTOG00000020712	RIF1	83	86.709	ENSTBEG00000016082	RIF1	82	86.709	Tupaia_belangeri
ENSSTOG00000020712	RIF1	100	78.574	ENSTTRG00000011190	RIF1	100	78.494	Tursiops_truncatus
ENSSTOG00000020712	RIF1	86	87.836	ENSUAMG00000026385	RIF1	97	87.836	Ursus_americanus
ENSSTOG00000020712	RIF1	100	77.965	ENSUMAG00000000337	RIF1	99	86.699	Ursus_maritimus
ENSSTOG00000020712	RIF1	100	75.411	ENSVPAG00000002162	RIF1	100	75.381	Vicugna_pacos
ENSSTOG00000020712	RIF1	100	76.213	ENSVVUG00000011293	RIF1	100	75.902	Vulpes_vulpes
ENSSTOG00000020712	RIF1	83	62.236	ENSXETG00000004530	rif1	84	62.236	Xenopus_tropicalis
ENSSTOG00000020712	RIF1	64	48.473	ENSXMAG00000000506	rif1	67	48.589	Xiphophorus_maculatus