EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000020814 (Gene tree)
Gene ID: 101955422
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 2551 bases
Position: chrJH393451.1:880548-883098
Accession: 101955422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000018213	RRM_1	PF00076.22	1.2e-16	1	1
ENSSTOP00000031761	RRM_1	PF00076.22	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000025433	PABPN1L-202	831	XM_005335470	ENSSTOP00000018213	276 (aa)	XP_005335527	I3N1G7
ENSSTOT00000031333	PABPN1L-201	873	-	ENSSTOP00000031761	290 (aa)	-	A0A287DE27

Gene Model

Click here to download ENSSTOG00000020814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000020814	PABPN1L	54	59.119	ENSSTOG00000029847	BCL2L2-PABPN1	87	59.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020814	PABPN1L	100	67.025	ENSG00000205022	PABPN1L	100	68.571	Homo_sapiens
ENSSTOG00000020814	PABPN1L	70	56.410	ENSACAG00000013250	PABPN1L	99	56.633	Anolis_carolinensis
ENSSTOG00000020814	PABPN1L	100	64.875	ENSANAG00000038178	PABPN1L	100	67.500	Aotus_nancymaae
ENSSTOG00000020814	PABPN1L	54	57.333	ENSAMXG00000010873	PABPN1L	62	53.552	Astyanax_mexicanus
ENSSTOG00000020814	PABPN1L	92	61.628	ENSBTAG00000023752	-	100	63.251	Bos_taurus
ENSSTOG00000020814	PABPN1L	100	65.950	ENSCJAG00000045284	PABPN1L	100	68.571	Callithrix_jacchus
ENSSTOG00000020814	PABPN1L	98	60.498	ENSCHIG00000013987	PABPN1L	100	56.610	Capra_hircus
ENSSTOG00000020814	PABPN1L	96	67.279	ENSCAPG00000007240	PABPN1L	99	67.279	Cavia_aperea
ENSSTOG00000020814	PABPN1L	93	69.261	ENSCPOG00000025951	PABPN1L	100	67.742	Cavia_porcellus
ENSSTOG00000020814	PABPN1L	100	67.384	ENSCCAG00000027631	PABPN1L	100	69.286	Cebus_capucinus
ENSSTOG00000020814	PABPN1L	100	67.025	ENSCATG00000031060	PABPN1L	100	68.214	Cercocebus_atys
ENSSTOG00000020814	PABPN1L	93	70.543	ENSCLAG00000000704	PABPN1L	100	69.286	Chinchilla_lanigera
ENSSTOG00000020814	PABPN1L	100	64.407	ENSCSAG00000002881	PABPN1L	100	65.203	Chlorocebus_sabaeus
ENSSTOG00000020814	PABPN1L	58	62.577	ENSCPBG00000023441	PABPN1L	61	58.000	Chrysemys_picta_bellii
ENSSTOG00000020814	PABPN1L	100	67.384	ENSCANG00000039336	PABPN1L	100	68.214	Colobus_angolensis_palliatus
ENSSTOG00000020814	PABPN1L	100	68.817	ENSCGRG00001013211	Pabpn1l	100	68.817	Cricetulus_griseus_chok1gshd
ENSSTOG00000020814	PABPN1L	100	68.817	ENSCGRG00000015868	Pabpn1l	100	68.817	Cricetulus_griseus_crigri
ENSSTOG00000020814	PABPN1L	100	57.394	ENSDNOG00000034677	PABPN1L	100	60.211	Dasypus_novemcinctus
ENSSTOG00000020814	PABPN1L	100	69.892	ENSEASG00005000777	PABPN1L	100	69.892	Equus_asinus_asinus
ENSSTOG00000020814	PABPN1L	100	70.609	ENSECAG00000000378	PABPN1L	100	70.609	Equus_caballus
ENSSTOG00000020814	PABPN1L	100	56.631	ENSEEUG00000004747	PABPN1L	100	56.631	Erinaceus_europaeus
ENSSTOG00000020814	PABPN1L	51	58.389	ENSELUG00000018385	PABPN1L	58	57.962	Esox_lucius
ENSSTOG00000020814	PABPN1L	92	68.605	ENSFCAG00000010465	PABPN1L	100	66.667	Felis_catus
ENSSTOG00000020814	PABPN1L	72	55.224	ENSFALG00000003319	PABPN1L	78	55.838	Ficedula_albicollis
ENSSTOG00000020814	PABPN1L	100	67.241	ENSFDAG00000021067	PABPN1L	99	70.758	Fukomys_damarensis
ENSSTOG00000020814	PABPN1L	55	62.420	ENSGALG00000006242	PABPN1L	89	62.420	Gallus_gallus
ENSSTOG00000020814	PABPN1L	65	58.333	ENSGAGG00000010613	PABPN1L	60	58.791	Gopherus_agassizii
ENSSTOG00000020814	PABPN1L	100	67.025	ENSGGOG00000012670	PABPN1L	100	68.571	Gorilla_gorilla
ENSSTOG00000020814	PABPN1L	96	71.591	ENSHGLG00000014207	PABPN1L	99	71.591	Heterocephalus_glaber_female
ENSSTOG00000020814	PABPN1L	96	71.591	ENSHGLG00100005230	PABPN1L	99	71.591	Heterocephalus_glaber_male
ENSSTOG00000020814	PABPN1L	100	66.786	ENSJJAG00000006433	Pabpn1l	100	66.786	Jaculus_jaculus
ENSSTOG00000020814	PABPN1L	87	58.871	ENSLAFG00000025902	-	88	60.526	Loxodonta_africana
ENSSTOG00000020814	PABPN1L	100	67.742	ENSMFAG00000002924	PABPN1L	100	68.929	Macaca_fascicularis
ENSSTOG00000020814	PABPN1L	100	67.742	ENSMMUG00000012438	PABPN1L	100	68.929	Macaca_mulatta
ENSSTOG00000020814	PABPN1L	100	67.742	ENSMNEG00000044808	PABPN1L	100	68.929	Macaca_nemestrina
ENSSTOG00000020814	PABPN1L	100	67.384	ENSMLEG00000032667	PABPN1L	100	68.571	Mandrillus_leucophaeus
ENSSTOG00000020814	PABPN1L	100	66.308	ENSMAUG00000014032	Pabpn1l	99	68.561	Mesocricetus_auratus
ENSSTOG00000020814	PABPN1L	100	68.929	ENSMICG00000028179	PABPN1L	100	68.214	Microcebus_murinus
ENSSTOG00000020814	PABPN1L	100	65.950	ENSMOCG00000007955	Pabpn1l	100	65.950	Microtus_ochrogaster
ENSSTOG00000020814	PABPN1L	100	49.470	ENSMODG00000003873	-	100	48.763	Monodelphis_domestica
ENSSTOG00000020814	PABPN1L	100	64.516	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.516	Mus_caroli
ENSSTOG00000020814	PABPN1L	100	64.516	ENSMUSG00000069867	Pabpn1l	100	64.516	Mus_musculus
ENSSTOG00000020814	PABPN1L	100	64.875	MGP_PahariEiJ_G0023268	Pabpn1l	100	64.875	Mus_pahari
ENSSTOG00000020814	PABPN1L	100	64.894	MGP_SPRETEiJ_G0032788	Pabpn1l	100	64.894	Mus_spretus
ENSSTOG00000020814	PABPN1L	77	55.405	ENSMLUG00000003228	PABPN1L	75	55.405	Myotis_lucifugus
ENSSTOG00000020814	PABPN1L	100	67.742	ENSNGAG00000023992	Pabpn1l	100	67.384	Nannospalax_galili
ENSSTOG00000020814	PABPN1L	100	66.786	ENSOPRG00000005597	PABPN1L	100	66.429	Ochotona_princeps
ENSSTOG00000020814	PABPN1L	100	65.398	ENSODEG00000004649	PABPN1L	100	65.052	Octodon_degus
ENSSTOG00000020814	PABPN1L	89	55.061	ENSOANG00000013901	PABPN1L	100	52.857	Ornithorhynchus_anatinus
ENSSTOG00000020814	PABPN1L	57	57.325	ENSORLG00000026560	PABPN1L	71	51.042	Oryzias_latipes
ENSSTOG00000020814	PABPN1L	57	57.325	ENSORLG00020015068	PABPN1L	71	51.042	Oryzias_latipes_hni
ENSSTOG00000020814	PABPN1L	57	57.325	ENSORLG00015000397	PABPN1L	71	51.042	Oryzias_latipes_hsok
ENSSTOG00000020814	PABPN1L	100	68.100	ENSOGAG00000000433	PABPN1L	100	69.643	Otolemur_garnettii
ENSSTOG00000020814	PABPN1L	100	59.936	ENSOARG00000013682	PABPN1L	100	63.259	Ovis_aries
ENSSTOG00000020814	PABPN1L	100	67.742	ENSPPAG00000028866	PABPN1L	100	67.742	Pan_paniscus
ENSSTOG00000020814	PABPN1L	92	68.217	ENSPPRG00000015106	PABPN1L	100	66.312	Panthera_pardus
ENSSTOG00000020814	PABPN1L	94	62.308	ENSPTIG00000015606	PABPN1L	100	61.538	Panthera_tigris_altaica
ENSSTOG00000020814	PABPN1L	100	67.742	ENSPTRG00000031120	PABPN1L	100	67.742	Pan_troglodytes
ENSSTOG00000020814	PABPN1L	100	67.742	ENSPANG00000026039	PABPN1L	100	68.929	Papio_anubis
ENSSTOG00000020814	PABPN1L	69	56.345	ENSPSIG00000003404	PABPN1L	100	56.061	Pelodiscus_sinensis
ENSSTOG00000020814	PABPN1L	100	67.025	ENSPEMG00000016624	Pabpn1l	100	67.025	Peromyscus_maniculatus_bairdii
ENSSTOG00000020814	PABPN1L	51	61.111	ENSPCIG00000007038	-	100	60.417	Phascolarctos_cinereus
ENSSTOG00000020814	PABPN1L	100	66.308	ENSPPYG00000007655	PABPN1L	100	68.214	Pongo_abelii
ENSSTOG00000020814	PABPN1L	100	68.100	ENSPCOG00000024077	PABPN1L	100	68.929	Propithecus_coquereli
ENSSTOG00000020814	PABPN1L	100	66.667	ENSPVAG00000002716	PABPN1L	100	67.376	Pteropus_vampyrus
ENSSTOG00000020814	PABPN1L	100	67.025	ENSRNOG00000029558	Pabpn1l	100	67.384	Rattus_norvegicus
ENSSTOG00000020814	PABPN1L	100	67.742	ENSRBIG00000030740	PABPN1L	100	68.929	Rhinopithecus_bieti
ENSSTOG00000020814	PABPN1L	99	67.266	ENSRROG00000035483	-	99	68.459	Rhinopithecus_roxellana
ENSSTOG00000020814	PABPN1L	100	67.742	ENSRROG00000032240	-	100	68.571	Rhinopithecus_roxellana
ENSSTOG00000020814	PABPN1L	100	64.875	ENSSBOG00000018410	PABPN1L	100	67.500	Saimiri_boliviensis_boliviensis
ENSSTOG00000020814	PABPN1L	100	48.829	ENSSHAG00000010001	-	100	48.829	Sarcophilus_harrisii
ENSSTOG00000020814	PABPN1L	87	53.138	ENSSARG00000005178	-	92	52.720	Sorex_araneus
ENSSTOG00000020814	PABPN1L	69	56.701	ENSSPUG00000007031	PABPN1L	84	56.923	Sphenodon_punctatus
ENSSTOG00000020814	PABPN1L	100	62.143	ENSSSCG00000036367	PABPN1L	100	65.125	Sus_scrofa
ENSSTOG00000020814	PABPN1L	51	53.472	ENSTRUG00000024725	PABPN1L	70	51.462	Takifugu_rubripes
ENSSTOG00000020814	PABPN1L	92	66.148	ENSTTRG00000004691	PABPN1L	100	67.376	Tursiops_truncatus
ENSSTOG00000020814	PABPN1L	59	50.575	ENSXETG00000011258	pabpn1l	89	49.505	Xenopus_tropicalis