EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000020966 (Gene tree)
Gene ID: 101970538
Gene Symbol: RAB30
Alias: -
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 77296 bases
Position: chrJH393308.1:11164405-11241700
Accession: 101970538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000022695	MMR_HSR1	PF01926.23	1.2e-05	1	1
ENSSTOP00000032500	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000023637	RAB30-202	892	XM_005323254	ENSSTOP00000022695	203 (aa)	XP_005323311	I3NE98
ENSSTOT00000032630	RAB30-201	1811	XM_005323255	ENSSTOP00000032500	203 (aa)	XP_005323312	I3NE98
ENSSTOT00000041788	RAB30-203	528	-	ENSSTOP00000029685	175 (aa)	-	A0A287D811

Gene Model

Click here to download ENSSTOG00000020966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000020966's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000020966	RAB30	83	47.929	ENSSTOG00000014560	-	82	47.929
ENSSTOG00000020966	RAB30	82	31.737	ENSSTOG00000004544	RHEB	88	31.737
ENSSTOG00000020966	RAB30	97	40.670	ENSSTOG00000000634	RAB25	96	40.670
ENSSTOG00000020966	RAB30	86	42.529	ENSSTOG00000000861	RAB15	82	42.529
ENSSTOG00000020966	RAB30	94	44.271	ENSSTOG00000001886	RAB2B	89	44.271
ENSSTOG00000020966	RAB30	81	33.728	ENSSTOG00000023505	RERG	82	33.728
ENSSTOG00000020966	RAB30	79	41.615	ENSSTOG00000014123	RAB6B	77	41.615
ENSSTOG00000020966	RAB30	84	34.503	ENSSTOG00000023151	NRAS	89	34.503
ENSSTOG00000020966	RAB30	89	46.703	ENSSTOG00000025122	RAB12	79	47.222
ENSSTOG00000020966	RAB30	78	48.447	ENSSTOG00000011237	RAB39B	76	48.447
ENSSTOG00000020966	RAB30	87	32.584	ENSSTOG00000009530	KRAS	93	32.584
ENSSTOG00000020966	RAB30	97	39.524	ENSSTOG00000031571	RAB11B	96	39.524
ENSSTOG00000020966	RAB30	79	40.361	ENSSTOG00000004081	RAB9B	82	40.361
ENSSTOG00000020966	RAB30	83	42.012	ENSSTOG00000006620	RAB5C	78	42.012
ENSSTOG00000020966	RAB30	89	34.426	ENSSTOG00000021206	HRAS	94	34.426
ENSSTOG00000020966	RAB30	82	50.000	ENSSTOG00000011052	RAB1B	83	50.000
ENSSTOG00000020966	RAB30	86	43.678	ENSSTOG00000026229	RAB5A	81	43.678
ENSSTOG00000020966	RAB30	77	35.000	ENSSTOG00000025062	RAB34	62	35.000
ENSSTOG00000020966	RAB30	82	50.602	ENSSTOG00000020693	-	81	50.610
ENSSTOG00000020966	RAB30	84	42.697	ENSSTOG00000000084	-	81	42.697
ENSSTOG00000020966	RAB30	81	33.133	ENSSTOG00000012534	MRAS	79	33.133
ENSSTOG00000020966	RAB30	89	46.409	ENSSTOG00000011222	-	89	46.409
ENSSTOG00000020966	RAB30	86	34.463	ENSSTOG00000002723	-	76	34.463
ENSSTOG00000020966	RAB30	87	36.932	ENSSTOG00000010962	RAB23	74	36.932
ENSSTOG00000020966	RAB30	89	40.556	ENSSTOG00000025248	RAB14	84	40.556
ENSSTOG00000020966	RAB30	97	37.981	ENSSTOG00000015255	RAB11A	96	37.981
ENSSTOG00000020966	RAB30	81	47.647	ENSSTOG00000027511	RAB33B	74	47.647
ENSSTOG00000020966	RAB30	83	42.857	ENSSTOG00000010536	RAB5B	78	42.857
ENSSTOG00000020966	RAB30	95	33.649	ENSSTOG00000008444	RAB36	79	33.649
ENSSTOG00000020966	RAB30	81	51.176	ENSSTOG00000008386	RAB33A	72	51.176
ENSSTOG00000020966	RAB30	95	38.889	ENSSTOG00000024550	RAB9A	97	38.889
ENSSTOG00000020966	RAB30	79	42.857	ENSSTOG00000023497	RAB6A	77	42.857
ENSSTOG00000020966	RAB30	88	38.043	ENSSTOG00000028487	RAB7A	88	38.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000020966	RAB30	100	100.000	ENSG00000137502	RAB30	100	100.000	Homo_sapiens
ENSSTOG00000020966	RAB30	100	86.207	ENSAPOG00000022625	rab30	100	86.207	Acanthochromis_polyacanthus
ENSSTOG00000020966	RAB30	100	100.000	ENSAMEG00000005231	RAB30	100	100.000	Ailuropoda_melanoleuca
ENSSTOG00000020966	RAB30	95	86.010	ENSAOCG00000012556	rab30	69	86.010	Amphiprion_ocellaris
ENSSTOG00000020966	RAB30	100	86.207	ENSAPEG00000012044	rab30	100	86.207	Amphiprion_percula
ENSSTOG00000020966	RAB30	100	86.207	ENSATEG00000010475	rab30	100	86.207	Anabas_testudineus
ENSSTOG00000020966	RAB30	100	98.030	ENSACAG00000001098	RAB30	100	98.030	Anolis_carolinensis
ENSSTOG00000020966	RAB30	100	100.000	ENSANAG00000029292	RAB30	100	100.000	Aotus_nancymaae
ENSSTOG00000020966	RAB30	100	86.700	ENSACLG00000023526	rab30	100	86.700	Astatotilapia_calliptera
ENSSTOG00000020966	RAB30	100	85.222	ENSAMXG00000009935	rab30	82	85.222	Astyanax_mexicanus
ENSSTOG00000020966	RAB30	100	100.000	ENSBTAG00000002417	RAB30	100	100.000	Bos_taurus
ENSSTOG00000020966	RAB30	85	63.218	WBGene00004282	rab-30	81	63.218	Caenorhabditis_elegans
ENSSTOG00000020966	RAB30	100	100.000	ENSCJAG00000041773	RAB30	100	100.000	Callithrix_jacchus
ENSSTOG00000020966	RAB30	100	100.000	ENSCAFG00000004616	RAB30	100	100.000	Canis_familiaris
ENSSTOG00000020966	RAB30	100	100.000	ENSCAFG00020017865	RAB30	100	100.000	Canis_lupus_dingo
ENSSTOG00000020966	RAB30	100	100.000	ENSCHIG00000020601	RAB30	100	100.000	Capra_hircus
ENSSTOG00000020966	RAB30	100	100.000	ENSTSYG00000009392	RAB30	100	100.000	Carlito_syrichta
ENSSTOG00000020966	RAB30	100	100.000	ENSCAPG00000009331	RAB30	100	100.000	Cavia_aperea
ENSSTOG00000020966	RAB30	100	100.000	ENSCPOG00000005047	RAB30	100	100.000	Cavia_porcellus
ENSSTOG00000020966	RAB30	100	100.000	ENSCCAG00000026824	RAB30	100	100.000	Cebus_capucinus
ENSSTOG00000020966	RAB30	100	100.000	ENSCATG00000040441	RAB30	100	100.000	Cercocebus_atys
ENSSTOG00000020966	RAB30	100	100.000	ENSCLAG00000014030	RAB30	100	100.000	Chinchilla_lanigera
ENSSTOG00000020966	RAB30	100	100.000	ENSCSAG00000003704	RAB30	100	100.000	Chlorocebus_sabaeus
ENSSTOG00000020966	RAB30	100	97.537	ENSCPBG00000006855	RAB30	100	97.537	Chrysemys_picta_bellii
ENSSTOG00000020966	RAB30	100	99.507	ENSCANG00000022240	RAB30	100	99.507	Colobus_angolensis_palliatus
ENSSTOG00000020966	RAB30	100	100.000	ENSCGRG00001021787	Rab30	100	100.000	Cricetulus_griseus_chok1gshd
ENSSTOG00000020966	RAB30	100	100.000	ENSCGRG00000014842	Rab30	100	100.000	Cricetulus_griseus_crigri
ENSSTOG00000020966	RAB30	100	85.714	ENSCSEG00000007292	rab30	100	85.714	Cynoglossus_semilaevis
ENSSTOG00000020966	RAB30	100	85.222	ENSCVAG00000018085	rab30	100	85.222	Cyprinodon_variegatus
ENSSTOG00000020966	RAB30	99	85.572	ENSDARG00000037884	rab30	100	85.572	Danio_rerio
ENSSTOG00000020966	RAB30	100	100.000	ENSDNOG00000039115	RAB30	100	100.000	Dasypus_novemcinctus
ENSSTOG00000020966	RAB30	100	99.015	ENSDORG00000010504	-	100	99.015	Dipodomys_ordii
ENSSTOG00000020966	RAB30	100	97.044	ENSDORG00000015066	-	100	97.044	Dipodomys_ordii
ENSSTOG00000020966	RAB30	85	73.988	FBgn0031882	Rab30	87	67.692	Drosophila_melanogaster
ENSSTOG00000020966	RAB30	100	100.000	ENSEASG00005012754	RAB30	100	100.000	Equus_asinus_asinus
ENSSTOG00000020966	RAB30	100	100.000	ENSECAG00000022769	RAB30	100	100.000	Equus_caballus
ENSSTOG00000020966	RAB30	100	84.314	ENSELUG00000022997	rab30	100	85.149	Esox_lucius
ENSSTOG00000020966	RAB30	100	100.000	ENSFCAG00000014416	RAB30	100	100.000	Felis_catus
ENSSTOG00000020966	RAB30	100	98.522	ENSFALG00000007765	RAB30	100	98.522	Ficedula_albicollis
ENSSTOG00000020966	RAB30	100	100.000	ENSFDAG00000014521	RAB30	100	100.000	Fukomys_damarensis
ENSSTOG00000020966	RAB30	100	85.714	ENSFHEG00000013918	rab30	100	85.714	Fundulus_heteroclitus
ENSSTOG00000020966	RAB30	100	81.773	ENSGMOG00000002552	rab30	100	81.773	Gadus_morhua
ENSSTOG00000020966	RAB30	100	98.522	ENSGALG00000017248	RAB30	100	98.522	Gallus_gallus
ENSSTOG00000020966	RAB30	100	85.222	ENSGAFG00000020309	rab30	100	85.222	Gambusia_affinis
ENSSTOG00000020966	RAB30	100	87.192	ENSGACG00000012006	rab30	100	87.192	Gasterosteus_aculeatus
ENSSTOG00000020966	RAB30	100	97.537	ENSGAGG00000004474	RAB30	100	97.537	Gopherus_agassizii
ENSSTOG00000020966	RAB30	100	100.000	ENSGGOG00000017157	RAB30	100	100.000	Gorilla_gorilla
ENSSTOG00000020966	RAB30	100	86.700	ENSHBUG00000000993	rab30	93	86.700	Haplochromis_burtoni
ENSSTOG00000020966	RAB30	100	100.000	ENSHGLG00000002759	RAB30	100	100.000	Heterocephalus_glaber_female
ENSSTOG00000020966	RAB30	100	100.000	ENSHGLG00100001213	RAB30	100	100.000	Heterocephalus_glaber_male
ENSSTOG00000020966	RAB30	66	89.474	ENSHCOG00000010707	rab30	71	89.474	Hippocampus_comes
ENSSTOG00000020966	RAB30	99	87.562	ENSIPUG00000021010	Rab30	100	87.562	Ictalurus_punctatus
ENSSTOG00000020966	RAB30	100	100.000	ENSJJAG00000020064	Rab30	100	100.000	Jaculus_jaculus
ENSSTOG00000020966	RAB30	100	85.714	ENSKMAG00000004439	rab30	100	85.714	Kryptolebias_marmoratus
ENSSTOG00000020966	RAB30	100	86.207	ENSLBEG00000001146	rab30	100	86.207	Labrus_bergylta
ENSSTOG00000020966	RAB30	100	91.626	ENSLACG00000006407	RAB30	100	91.626	Latimeria_chalumnae
ENSSTOG00000020966	RAB30	100	89.163	ENSLOCG00000005884	rab30	100	89.163	Lepisosteus_oculatus
ENSSTOG00000020966	RAB30	100	99.507	ENSLAFG00000010711	RAB30	100	99.507	Loxodonta_africana
ENSSTOG00000020966	RAB30	100	100.000	ENSMFAG00000033119	RAB30	100	100.000	Macaca_fascicularis
ENSSTOG00000020966	RAB30	100	100.000	ENSMMUG00000007842	RAB30	100	100.000	Macaca_mulatta
ENSSTOG00000020966	RAB30	100	100.000	ENSMNEG00000037406	RAB30	100	100.000	Macaca_nemestrina
ENSSTOG00000020966	RAB30	100	100.000	ENSMLEG00000039496	RAB30	100	100.000	Mandrillus_leucophaeus
ENSSTOG00000020966	RAB30	100	86.207	ENSMAMG00000011973	rab30	100	86.207	Mastacembelus_armatus
ENSSTOG00000020966	RAB30	100	86.700	ENSMZEG00005024032	rab30	93	86.700	Maylandia_zebra
ENSSTOG00000020966	RAB30	100	97.549	ENSMGAG00000015230	RAB30	100	97.549	Meleagris_gallopavo
ENSSTOG00000020966	RAB30	100	100.000	ENSMAUG00000008179	Rab30	100	100.000	Mesocricetus_auratus
ENSSTOG00000020966	RAB30	100	100.000	ENSMICG00000012002	RAB30	100	100.000	Microcebus_murinus
ENSSTOG00000020966	RAB30	100	100.000	ENSMOCG00000009821	-	100	100.000	Microtus_ochrogaster
ENSSTOG00000020966	RAB30	100	85.714	ENSMMOG00000000304	rab30	100	85.714	Mola_mola
ENSSTOG00000020966	RAB30	100	99.507	ENSMODG00000004506	RAB30	100	99.507	Monodelphis_domestica
ENSSTOG00000020966	RAB30	100	86.700	ENSMALG00000010438	rab30	100	86.700	Monopterus_albus
ENSSTOG00000020966	RAB30	100	99.507	MGP_CAROLIEiJ_G0029992	Rab30	100	99.507	Mus_caroli
ENSSTOG00000020966	RAB30	100	100.000	ENSMUSG00000030643	Rab30	100	100.000	Mus_musculus
ENSSTOG00000020966	RAB30	100	100.000	MGP_PahariEiJ_G0013212	Rab30	100	100.000	Mus_pahari
ENSSTOG00000020966	RAB30	100	100.000	MGP_SPRETEiJ_G0031102	Rab30	100	100.000	Mus_spretus
ENSSTOG00000020966	RAB30	100	100.000	ENSMPUG00000008088	RAB30	100	100.000	Mustela_putorius_furo
ENSSTOG00000020966	RAB30	100	98.522	ENSMLUG00000006552	RAB30	100	98.522	Myotis_lucifugus
ENSSTOG00000020966	RAB30	100	100.000	ENSNGAG00000018930	Rab30	100	100.000	Nannospalax_galili
ENSSTOG00000020966	RAB30	100	86.700	ENSNBRG00000002082	rab30	93	86.700	Neolamprologus_brichardi
ENSSTOG00000020966	RAB30	100	100.000	ENSNLEG00000029364	RAB30	100	100.000	Nomascus_leucogenys
ENSSTOG00000020966	RAB30	100	97.537	ENSMEUG00000012886	RAB30	100	97.537	Notamacropus_eugenii
ENSSTOG00000020966	RAB30	59	100.000	ENSOPRG00000007511	RAB30	100	100.000	Ochotona_princeps
ENSSTOG00000020966	RAB30	100	100.000	ENSODEG00000003833	RAB30	100	100.000	Octodon_degus
ENSSTOG00000020966	RAB30	100	86.700	ENSONIG00000005708	rab30	100	86.700	Oreochromis_niloticus
ENSSTOG00000020966	RAB30	100	100.000	ENSOCUG00000007580	RAB30	100	100.000	Oryctolagus_cuniculus
ENSSTOG00000020966	RAB30	100	85.714	ENSORLG00000029812	rab30	100	85.714	Oryzias_latipes
ENSSTOG00000020966	RAB30	100	85.714	ENSORLG00020015288	rab30	100	85.714	Oryzias_latipes_hni
ENSSTOG00000020966	RAB30	100	85.714	ENSORLG00015020972	rab30	100	85.714	Oryzias_latipes_hsok
ENSSTOG00000020966	RAB30	100	85.222	ENSOMEG00000001613	rab30	100	85.222	Oryzias_melastigma
ENSSTOG00000020966	RAB30	100	100.000	ENSOGAG00000033189	RAB30	100	100.000	Otolemur_garnettii
ENSSTOG00000020966	RAB30	100	100.000	ENSOARG00000005688	RAB30	100	100.000	Ovis_aries
ENSSTOG00000020966	RAB30	100	100.000	ENSPPAG00000031604	RAB30	100	100.000	Pan_paniscus
ENSSTOG00000020966	RAB30	100	100.000	ENSPPRG00000023881	RAB30	100	100.000	Panthera_pardus
ENSSTOG00000020966	RAB30	100	100.000	ENSPTIG00000009836	RAB30	100	100.000	Panthera_tigris_altaica
ENSSTOG00000020966	RAB30	100	100.000	ENSPTRG00000004125	RAB30	100	100.000	Pan_troglodytes
ENSSTOG00000020966	RAB30	100	100.000	ENSPANG00000003974	RAB30	100	100.000	Papio_anubis
ENSSTOG00000020966	RAB30	99	88.614	ENSPKIG00000015202	rab30	99	88.614	Paramormyrops_kingsleyae
ENSSTOG00000020966	RAB30	100	96.552	ENSPSIG00000003078	RAB30	100	96.552	Pelodiscus_sinensis
ENSSTOG00000020966	RAB30	100	76.293	ENSPMGG00000016093	rab30	100	76.293	Periophthalmus_magnuspinnatus
ENSSTOG00000020966	RAB30	100	100.000	ENSPEMG00000023854	Rab30	100	100.000	Peromyscus_maniculatus_bairdii
ENSSTOG00000020966	RAB30	99	67.619	ENSPMAG00000006105	rab30	99	67.619	Petromyzon_marinus
ENSSTOG00000020966	RAB30	100	99.507	ENSPCIG00000027547	RAB30	94	99.507	Phascolarctos_cinereus
ENSSTOG00000020966	RAB30	100	85.714	ENSPFOG00000005479	rab30	100	85.714	Poecilia_formosa
ENSSTOG00000020966	RAB30	100	85.714	ENSPLAG00000015383	rab30	100	85.714	Poecilia_latipinna
ENSSTOG00000020966	RAB30	100	85.714	ENSPMEG00000009701	rab30	100	85.714	Poecilia_mexicana
ENSSTOG00000020966	RAB30	100	85.714	ENSPREG00000014634	rab30	100	85.714	Poecilia_reticulata
ENSSTOG00000020966	RAB30	100	100.000	ENSPPYG00000003733	RAB30	100	100.000	Pongo_abelii
ENSSTOG00000020966	RAB30	100	99.507	ENSPCAG00000000574	RAB30	100	99.507	Procavia_capensis
ENSSTOG00000020966	RAB30	100	100.000	ENSPCOG00000017316	RAB30	100	100.000	Propithecus_coquereli
ENSSTOG00000020966	RAB30	100	100.000	ENSPVAG00000005455	RAB30	100	100.000	Pteropus_vampyrus
ENSSTOG00000020966	RAB30	100	86.207	ENSPNYG00000009728	rab30	93	86.207	Pundamilia_nyererei
ENSSTOG00000020966	RAB30	99	87.065	ENSPNAG00000010760	rab30	100	87.065	Pygocentrus_nattereri
ENSSTOG00000020966	RAB30	100	100.000	ENSRNOG00000010224	Rab30	100	100.000	Rattus_norvegicus
ENSSTOG00000020966	RAB30	100	100.000	ENSRBIG00000039227	RAB30	100	100.000	Rhinopithecus_bieti
ENSSTOG00000020966	RAB30	100	100.000	ENSRROG00000031260	RAB30	100	100.000	Rhinopithecus_roxellana
ENSSTOG00000020966	RAB30	100	100.000	ENSSBOG00000026403	RAB30	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000020966	RAB30	100	98.058	ENSSHAG00000018081	RAB30	100	98.058	Sarcophilus_harrisii
ENSSTOG00000020966	RAB30	100	85.714	ENSSMAG00000002500	rab30	100	85.714	Scophthalmus_maximus
ENSSTOG00000020966	RAB30	100	86.700	ENSSDUG00000013325	rab30	100	86.700	Seriola_dumerili
ENSSTOG00000020966	RAB30	100	86.700	ENSSLDG00000022533	rab30	100	86.700	Seriola_lalandi_dorsalis
ENSSTOG00000020966	RAB30	100	97.044	ENSSPUG00000006349	RAB30	100	97.044	Sphenodon_punctatus
ENSSTOG00000020966	RAB30	100	86.700	ENSSPAG00000013422	rab30	100	86.700	Stegastes_partitus
ENSSTOG00000020966	RAB30	100	100.000	ENSSSCG00000014900	RAB30	100	100.000	Sus_scrofa
ENSSTOG00000020966	RAB30	100	98.522	ENSTGUG00000012941	RAB30	100	98.522	Taeniopygia_guttata
ENSSTOG00000020966	RAB30	99	86.070	ENSTRUG00000022559	rab30	99	86.070	Takifugu_rubripes
ENSSTOG00000020966	RAB30	100	100.000	ENSTBEG00000009832	RAB30	100	100.000	Tupaia_belangeri
ENSSTOG00000020966	RAB30	100	100.000	ENSTTRG00000006100	RAB30	100	100.000	Tursiops_truncatus
ENSSTOG00000020966	RAB30	100	100.000	ENSUAMG00000009326	RAB30	100	100.000	Ursus_americanus
ENSSTOG00000020966	RAB30	100	100.000	ENSUMAG00000023572	RAB30	100	100.000	Ursus_maritimus
ENSSTOG00000020966	RAB30	100	100.000	ENSVVUG00000017471	RAB30	100	100.000	Vulpes_vulpes
ENSSTOG00000020966	RAB30	100	93.103	ENSXETG00000013633	rab30	100	93.103	Xenopus_tropicalis
ENSSTOG00000020966	RAB30	100	85.714	ENSXMAG00000025848	rab30	100	85.714	Xiphophorus_maculatus