EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000021151 (Gene tree)
Gene ID: 101974240
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 39313 bases
Position: chrJH393504.1:236037-275349
Accession: 101974240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000019109	MMR_HSR1	PF01926.23	8.4e-09	1	1
ENSSTOP00000031985	MMR_HSR1	PF01926.23	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000022216	-	1419	XM_013364051	ENSSTOP00000019109	472 (aa)	XP_013219505	I3N413
ENSSTOT00000032320	-	7028	XM_013364050	ENSSTOP00000031985	921 (aa)	XP_013219504	A0A287DEJ7

Gene Model

Click here to download ENSSTOG00000021151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000021151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000021151	-	63	35.906	ENSSTOG00000000719	EHD4	55	35.906
ENSSTOG00000021151	-	77	33.973	ENSSTOG00000009829	EHD1	67	33.973
ENSSTOG00000021151	-	79	32.440	ENSSTOG00000028279	EHD3	67	33.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000021151	-	100	96.195	ENSG00000185739	SRL	100	98.144	Homo_sapiens
ENSSTOG00000021151	-	94	76.697	ENSAPOG00000012432	SRL	98	75.336	Acanthochromis_polyacanthus
ENSSTOG00000021151	-	100	80.720	ENSAPOG00000018093	srl	100	83.559	Acanthochromis_polyacanthus
ENSSTOG00000021151	-	98	96.753	ENSAMEG00000010862	SRL	93	95.541	Ailuropoda_melanoleuca
ENSSTOG00000021151	-	94	75.000	ENSACIG00000015419	SRL	99	75.000	Amphilophus_citrinellus
ENSSTOG00000021151	-	96	82.743	ENSACIG00000015799	srl	100	82.781	Amphilophus_citrinellus
ENSSTOG00000021151	-	92	84.527	ENSAOCG00000007574	srl	99	84.527	Amphiprion_ocellaris
ENSSTOG00000021151	-	96	75.000	ENSAOCG00000017049	SRL	99	75.000	Amphiprion_ocellaris
ENSSTOG00000021151	-	96	71.429	ENSAPEG00000006533	SRL	99	71.209	Amphiprion_percula
ENSSTOG00000021151	-	100	80.932	ENSAPEG00000006911	srl	96	82.965	Amphiprion_percula
ENSSTOG00000021151	-	94	73.626	ENSATEG00000009643	SRL	52	73.626	Anabas_testudineus
ENSSTOG00000021151	-	100	80.720	ENSATEG00000024315	srl	96	82.237	Anabas_testudineus
ENSSTOG00000021151	-	100	86.066	ENSACAG00000016380	SRL	86	88.511	Anolis_carolinensis
ENSSTOG00000021151	-	94	72.967	ENSACLG00000024674	SRL	55	75.062	Astatotilapia_calliptera
ENSSTOG00000021151	-	98	81.720	ENSACLG00000027685	srl	98	82.889	Astatotilapia_calliptera
ENSSTOG00000021151	-	99	80.042	ENSAMXG00000018789	srl	87	83.108	Astyanax_mexicanus
ENSSTOG00000021151	-	88	78.072	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSSTOG00000021151	-	96	96.689	ENSBTAG00000001078	SRL	98	65.570	Bos_taurus
ENSSTOG00000021151	-	94	97.743	ENSCJAG00000019750	SRL	97	96.718	Callithrix_jacchus
ENSSTOG00000021151	-	97	96.957	ENSCAFG00000019233	SRL	85	96.950	Canis_familiaris
ENSSTOG00000021151	-	96	97.363	ENSCAFG00020025024	SRL	98	72.727	Canis_lupus_dingo
ENSSTOG00000021151	-	99	95.484	ENSCHIG00000017927	SRL	98	67.686	Capra_hircus
ENSSTOG00000021151	-	100	97.252	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSSTOG00000021151	-	100	98.517	ENSCPOG00000012643	SRL	100	98.517	Cavia_porcellus
ENSSTOG00000021151	-	100	89.006	ENSCCAG00000032646	SRL	100	97.889	Cebus_capucinus
ENSSTOG00000021151	-	100	96.406	ENSCATG00000032227	-	100	96.406	Cercocebus_atys
ENSSTOG00000021151	-	100	97.881	ENSCLAG00000016242	SRL	100	97.881	Chinchilla_lanigera
ENSSTOG00000021151	-	97	96.087	ENSCSAG00000009635	-	98	70.722	Chlorocebus_sabaeus
ENSSTOG00000021151	-	82	96.883	ENSCHOG00000001618	SRL	86	96.883	Choloepus_hoffmanni
ENSSTOG00000021151	-	96	92.746	ENSCPBG00000026371	SRL	97	88.273	Chrysemys_picta_bellii
ENSSTOG00000021151	-	88	60.096	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSSTOG00000021151	-	100	96.406	ENSCANG00000035872	SRL	100	98.144	Colobus_angolensis_palliatus
ENSSTOG00000021151	-	100	97.458	ENSCGRG00001016630	Srl	100	97.458	Cricetulus_griseus_chok1gshd
ENSSTOG00000021151	-	100	97.458	ENSCGRG00000005458	Srl	100	97.458	Cricetulus_griseus_crigri
ENSSTOG00000021151	-	96	72.149	ENSCSEG00000011866	SRL	92	72.149	Cynoglossus_semilaevis
ENSSTOG00000021151	-	100	80.932	ENSCSEG00000016151	srl	99	80.994	Cynoglossus_semilaevis
ENSSTOG00000021151	-	100	80.932	ENSCVAG00000003513	srl	96	83.937	Cyprinodon_variegatus
ENSSTOG00000021151	-	94	75.221	ENSCVAG00000022465	SRL	60	75.221	Cyprinodon_variegatus
ENSSTOG00000021151	-	100	81.568	ENSDARG00000104587	srl	98	82.789	Danio_rerio
ENSSTOG00000021151	-	80	77.083	ENSDARG00000112959	CABZ01072309.1	90	83.140	Danio_rerio
ENSSTOG00000021151	-	96	96.696	ENSDNOG00000011643	SRL	98	70.939	Dasypus_novemcinctus
ENSSTOG00000021151	-	100	97.034	ENSDORG00000014807	Srl	100	97.034	Dipodomys_ordii
ENSSTOG00000021151	-	75	67.507	ENSEBUG00000015937	srl	88	67.529	Eptatretus_burgeri
ENSSTOG00000021151	-	96	96.247	ENSEASG00005000942	SRL	98	72.588	Equus_asinus_asinus
ENSSTOG00000021151	-	99	95.551	ENSECAG00000024219	SRL	96	96.460	Equus_caballus
ENSSTOG00000021151	-	100	77.413	ENSELUG00000015616	srl	97	78.858	Esox_lucius
ENSSTOG00000021151	-	100	96.617	ENSFCAG00000022075	SRL	100	96.617	Felis_catus
ENSSTOG00000021151	-	96	90.287	ENSFALG00000004328	SRL	66	89.032	Ficedula_albicollis
ENSSTOG00000021151	-	100	98.093	ENSFDAG00000006199	SRL	100	98.093	Fukomys_damarensis
ENSSTOG00000021151	-	100	71.107	ENSFHEG00000011854	SRL	98	76.871	Fundulus_heteroclitus
ENSSTOG00000021151	-	100	80.085	ENSFHEG00000011239	srl	95	83.258	Fundulus_heteroclitus
ENSSTOG00000021151	-	93	81.457	ENSGMOG00000014954	srl	99	81.457	Gadus_morhua
ENSSTOG00000021151	-	99	88.535	ENSGALG00000038884	SRL	97	89.497	Gallus_gallus
ENSSTOG00000021151	-	94	76.697	ENSGAFG00000016984	SRL	98	76.871	Gambusia_affinis
ENSSTOG00000021151	-	100	80.085	ENSGAFG00000000010	srl	97	82.921	Gambusia_affinis
ENSSTOG00000021151	-	93	81.457	ENSGACG00000011332	srl	99	81.457	Gasterosteus_aculeatus
ENSSTOG00000021151	-	100	95.983	ENSGGOG00000011312	-	97	96.937	Gorilla_gorilla
ENSSTOG00000021151	-	98	81.720	ENSHBUG00000007581	srl	98	82.889	Haplochromis_burtoni
ENSSTOG00000021151	-	94	72.747	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSSTOG00000021151	-	100	98.305	ENSHGLG00000015271	SRL	100	98.305	Heterocephalus_glaber_female
ENSSTOG00000021151	-	100	98.305	ENSHGLG00100019378	SRL	100	98.305	Heterocephalus_glaber_male
ENSSTOG00000021151	-	94	72.627	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSSTOG00000021151	-	99	80.213	ENSHCOG00000008687	srl	98	83.484	Hippocampus_comes
ENSSTOG00000021151	-	92	70.642	ENSIPUG00000011609	SRL	95	69.495	Ictalurus_punctatus
ENSSTOG00000021151	-	100	79.237	ENSIPUG00000012513	srl	97	80.306	Ictalurus_punctatus
ENSSTOG00000021151	-	100	97.669	ENSJJAG00000016400	Srl	100	97.669	Jaculus_jaculus
ENSSTOG00000021151	-	98	80.911	ENSKMAG00000014115	srl	93	85.273	Kryptolebias_marmoratus
ENSSTOG00000021151	-	93	76.190	ENSKMAG00000019537	SRL	100	76.190	Kryptolebias_marmoratus
ENSSTOG00000021151	-	96	74.781	ENSLBEG00000013811	SRL	98	74.561	Labrus_bergylta
ENSSTOG00000021151	-	100	80.720	ENSLBEG00000026643	srl	96	82.301	Labrus_bergylta
ENSSTOG00000021151	-	96	85.398	ENSLACG00000002825	SRL	100	85.430	Latimeria_chalumnae
ENSSTOG00000021151	-	99	82.942	ENSLOCG00000002644	srl	97	84.061	Lepisosteus_oculatus
ENSSTOG00000021151	-	96	96.476	ENSLAFG00000006329	SRL	98	72.508	Loxodonta_africana
ENSSTOG00000021151	-	91	98.144	ENSMFAG00000037383	SRL	100	98.144	Macaca_fascicularis
ENSSTOG00000021151	-	98	96.095	ENSMNEG00000019236	-	97	96.095	Macaca_nemestrina
ENSSTOG00000021151	-	100	88.372	ENSMLEG00000032156	SRL	96	88.621	Mandrillus_leucophaeus
ENSSTOG00000021151	-	93	73.568	ENSMAMG00000013756	SRL	53	73.465	Mastacembelus_armatus
ENSSTOG00000021151	-	99	79.787	ENSMAMG00000023322	srl	94	83.710	Mastacembelus_armatus
ENSSTOG00000021151	-	94	72.967	ENSMZEG00005004010	SRL	60	70.737	Maylandia_zebra
ENSSTOG00000021151	-	98	81.720	ENSMZEG00005004548	srl	98	82.889	Maylandia_zebra
ENSSTOG00000021151	-	96	90.687	ENSMGAG00000009342	SRL	95	92.308	Meleagris_gallopavo
ENSSTOG00000021151	-	96	96.035	ENSMICG00000032307	SRL	97	95.842	Microcebus_murinus
ENSSTOG00000021151	-	100	97.458	ENSMOCG00000008208	Srl	100	97.458	Microtus_ochrogaster
ENSSTOG00000021151	-	93	72.967	ENSMMOG00000021572	SRL	99	73.128	Mola_mola
ENSSTOG00000021151	-	94	83.484	ENSMMOG00000013970	srl	98	83.484	Mola_mola
ENSSTOG00000021151	-	96	96.468	ENSMODG00000016380	-	98	66.304	Monodelphis_domestica
ENSSTOG00000021151	-	100	80.338	ENSMALG00000005039	srl	98	82.805	Monopterus_albus
ENSSTOG00000021151	-	89	75.895	ENSMALG00000000670	SRL	98	75.120	Monopterus_albus
ENSSTOG00000021151	-	100	97.246	MGP_CAROLIEiJ_G0020400	Srl	100	97.246	Mus_caroli
ENSSTOG00000021151	-	100	97.246	ENSMUSG00000022519	Srl	100	97.246	Mus_musculus
ENSSTOG00000021151	-	96	97.345	MGP_PahariEiJ_G0016108	Srl	98	77.381	Mus_pahari
ENSSTOG00000021151	-	100	97.246	MGP_SPRETEiJ_G0021294	Srl	100	97.246	Mus_spretus
ENSSTOG00000021151	-	96	97.566	ENSMPUG00000015025	SRL	97	70.252	Mustela_putorius_furo
ENSSTOG00000021151	-	98	95.662	ENSMLUG00000030733	SRL	100	71.240	Myotis_lucifugus
ENSSTOG00000021151	-	100	97.246	ENSNGAG00000019741	Srl	100	97.246	Nannospalax_galili
ENSSTOG00000021151	-	98	81.720	ENSNBRG00000023775	srl	97	82.456	Neolamprologus_brichardi
ENSSTOG00000021151	-	94	72.967	ENSNBRG00000002422	SRL	62	69.023	Neolamprologus_brichardi
ENSSTOG00000021151	-	100	89.429	ENSNLEG00000029051	SRL	96	89.934	Nomascus_leucogenys
ENSSTOG00000021151	-	97	90.435	ENSOPRG00000000477	-	98	69.307	Ochotona_princeps
ENSSTOG00000021151	-	100	97.034	ENSODEG00000013256	SRL	100	97.034	Octodon_degus
ENSSTOG00000021151	-	97	81.917	ENSONIG00000005192	srl	96	82.522	Oreochromis_niloticus
ENSSTOG00000021151	-	97	96.522	ENSOCUG00000025140	SRL	98	78.878	Oryctolagus_cuniculus
ENSSTOG00000021151	-	96	74.501	ENSORLG00000015064	SRL	99	74.336	Oryzias_latipes
ENSSTOG00000021151	-	100	79.661	ENSORLG00000008291	srl	92	85.052	Oryzias_latipes
ENSSTOG00000021151	-	100	79.873	ENSORLG00020019784	srl	79	85.530	Oryzias_latipes_hni
ENSSTOG00000021151	-	96	74.723	ENSORLG00020018173	SRL	99	74.558	Oryzias_latipes_hni
ENSSTOG00000021151	-	100	79.449	ENSORLG00015009342	srl	94	80.131	Oryzias_latipes_hsok
ENSSTOG00000021151	-	96	74.945	ENSORLG00015019063	SRL	99	74.779	Oryzias_latipes_hsok
ENSSTOG00000021151	-	100	79.661	ENSOMEG00000010006	srl	98	82.955	Oryzias_melastigma
ENSSTOG00000021151	-	96	71.795	ENSOMEG00000005682	SRL	53	73.407	Oryzias_melastigma
ENSSTOG00000021151	-	96	96.476	ENSOGAG00000029266	SRL	100	70.342	Otolemur_garnettii
ENSSTOG00000021151	-	99	95.484	ENSOARG00000003074	SRL	72	96.903	Ovis_aries
ENSSTOG00000021151	-	97	96.507	ENSPPAG00000024919	-	100	97.912	Pan_paniscus
ENSSTOG00000021151	-	100	96.829	ENSPPRG00000010274	SRL	100	98.376	Panthera_pardus
ENSSTOG00000021151	-	100	96.829	ENSPTIG00000015162	SRL	100	98.376	Panthera_tigris_altaica
ENSSTOG00000021151	-	100	95.983	ENSPTRG00000007712	SRL	100	97.912	Pan_troglodytes
ENSSTOG00000021151	-	98	96.312	ENSPANG00000013804	SRL	99	96.312	Papio_anubis
ENSSTOG00000021151	-	100	80.973	ENSPKIG00000006405	srl	97	82.353	Paramormyrops_kingsleyae
ENSSTOG00000021151	-	100	73.729	ENSPKIG00000024974	SRL	88	76.471	Paramormyrops_kingsleyae
ENSSTOG00000021151	-	96	90.529	ENSPSIG00000008586	SRL	99	58.830	Pelodiscus_sinensis
ENSSTOG00000021151	-	96	83.444	ENSPMGG00000021081	srl	97	83.444	Periophthalmus_magnuspinnatus
ENSSTOG00000021151	-	94	73.529	ENSPMGG00000023505	-	99	72.973	Periophthalmus_magnuspinnatus
ENSSTOG00000021151	-	100	97.458	ENSPEMG00000015842	Srl	100	97.458	Peromyscus_maniculatus_bairdii
ENSSTOG00000021151	-	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSSTOG00000021151	-	96	95.787	ENSPCIG00000012128	SRL	99	95.796	Phascolarctos_cinereus
ENSSTOG00000021151	-	100	78.512	ENSPFOG00000011408	srl	96	80.258	Poecilia_formosa
ENSSTOG00000021151	-	97	81.481	ENSPLAG00000008017	srl	97	83.146	Poecilia_latipinna
ENSSTOG00000021151	-	94	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSSTOG00000021151	-	100	80.297	ENSPMEG00000006745	srl	97	83.146	Poecilia_mexicana
ENSSTOG00000021151	-	94	73.961	ENSPMEG00000005890	SRL	66	69.583	Poecilia_mexicana
ENSSTOG00000021151	-	94	77.376	ENSPREG00000000315	SRL	98	76.244	Poecilia_reticulata
ENSSTOG00000021151	-	100	79.873	ENSPREG00000007751	srl	99	82.921	Poecilia_reticulata
ENSSTOG00000021151	-	89	98.329	ENSPPYG00000007053	SRL	98	98.329	Pongo_abelii
ENSSTOG00000021151	-	96	95.585	ENSPCAG00000003378	-	83	92.929	Procavia_capensis
ENSSTOG00000021151	-	97	96.070	ENSPCOG00000023135	SRL	100	97.448	Propithecus_coquereli
ENSSTOG00000021151	-	96	97.788	ENSPVAG00000006586	SRL	98	71.772	Pteropus_vampyrus
ENSSTOG00000021151	-	98	81.720	ENSPNYG00000001200	srl	98	82.889	Pundamilia_nyererei
ENSSTOG00000021151	-	94	72.967	ENSPNYG00000003423	SRL	59	70.650	Pundamilia_nyererei
ENSSTOG00000021151	-	97	73.593	ENSPNAG00000007361	-	92	74.388	Pygocentrus_nattereri
ENSSTOG00000021151	-	100	78.814	ENSPNAG00000023106	srl	95	81.573	Pygocentrus_nattereri
ENSSTOG00000021151	-	97	96.943	ENSRNOG00000005269	Srl	98	78.399	Rattus_norvegicus
ENSSTOG00000021151	-	97	96.087	ENSRBIG00000042358	SRL	98	72.642	Rhinopithecus_bieti
ENSSTOG00000021151	-	94	97.743	ENSSBOG00000029273	SRL	97	96.718	Saimiri_boliviensis_boliviensis
ENSSTOG00000021151	-	97	95.833	ENSSHAG00000011715	-	99	64.255	Sarcophilus_harrisii
ENSSTOG00000021151	-	100	78.512	ENSSFOG00015009773	srl	97	82.819	Scleropages_formosus
ENSSTOG00000021151	-	94	76.697	ENSSFOG00015021327	SRL	51	75.439	Scleropages_formosus
ENSSTOG00000021151	-	100	80.338	ENSSMAG00000016274	srl	99	82.018	Scophthalmus_maximus
ENSSTOG00000021151	-	93	73.523	ENSSMAG00000002232	SRL	50	72.527	Scophthalmus_maximus
ENSSTOG00000021151	-	94	74.779	ENSSDUG00000009161	SRL	98	75.000	Seriola_dumerili
ENSSTOG00000021151	-	94	84.163	ENSSDUG00000010808	srl	97	84.163	Seriola_dumerili
ENSSTOG00000021151	-	94	74.398	ENSSLDG00000014601	SRL	99	74.505	Seriola_lalandi_dorsalis
ENSSTOG00000021151	-	96	82.781	ENSSLDG00000022024	srl	95	84.163	Seriola_lalandi_dorsalis
ENSSTOG00000021151	-	96	90.487	ENSSPUG00000016859	SRL	99	90.508	Sphenodon_punctatus
ENSSTOG00000021151	-	93	76.190	ENSSPAG00000014254	SRL	98	75.227	Stegastes_partitus
ENSSTOG00000021151	-	100	81.144	ENSSPAG00000019105	srl	96	83.040	Stegastes_partitus
ENSSTOG00000021151	-	96	96.026	ENSSSCG00000007949	SRL	99	96.429	Sus_scrofa
ENSSTOG00000021151	-	77	92.265	ENSTGUG00000016121	-	96	93.103	Taeniopygia_guttata
ENSSTOG00000021151	-	96	89.890	ENSTGUG00000003951	-	99	90.110	Taeniopygia_guttata
ENSSTOG00000021151	-	89	75.656	ENSTRUG00000013310	SRL	55	75.656	Takifugu_rubripes
ENSSTOG00000021151	-	100	80.720	ENSTRUG00000006005	srl	97	81.718	Takifugu_rubripes
ENSSTOG00000021151	-	96	81.498	ENSTNIG00000009739	srl	97	81.498	Tetraodon_nigroviridis
ENSSTOG00000021151	-	93	96.591	ENSTTRG00000002709	-	67	96.591	Tursiops_truncatus
ENSSTOG00000021151	-	96	98.230	ENSUAMG00000005701	SRL	98	71.681	Ursus_americanus
ENSSTOG00000021151	-	96	98.009	ENSUMAG00000002574	SRL	98	71.256	Ursus_maritimus
ENSSTOG00000021151	-	96	97.577	ENSVVUG00000016331	-	87	72.928	Vulpes_vulpes
ENSSTOG00000021151	-	96	89.381	ENSXETG00000017313	srl	100	89.381	Xenopus_tropicalis
ENSSTOG00000021151	-	89	85.273	ENSXCOG00000010424	srl	97	85.273	Xiphophorus_couchianus
ENSSTOG00000021151	-	96	75.388	ENSXCOG00000014584	SRL	100	75.388	Xiphophorus_couchianus
ENSSTOG00000021151	-	100	80.508	ENSXMAG00000004625	srl	92	82.743	Xiphophorus_maculatus
ENSSTOG00000021151	-	94	74.286	ENSXMAG00000027598	SRL	62	74.945	Xiphophorus_maculatus