EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000022273 (Gene tree)
Gene ID: 101968286
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 140534 bases
Position: chrJH393285.1:5930892-6071425
Accession: 101968286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000020590	ResIII	PF04851.15	9.5e-07	1	1
ENSSTOP00000005507	ResIII	PF04851.15	1.1e-06	1	1
ENSSTOP00000005507	BRK	PF07533.16	9.8e-31	1	2
ENSSTOP00000005507	BRK	PF07533.16	9.8e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000029568	CHD9-202	3003	-	ENSSTOP00000020590	874 (aa)	-	I3N894
ENSSTOT00000006156	CHD9-201	11707	XM_013366079	ENSSTOP00000005507	2882 (aa)	XP_013221533	I3M7C9

Gene Model

Click here to download ENSSTOG00000022273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000022273	CHD9	58	43.393	ENSSTOG00000010683	SMARCA5	57	39.905
ENSSTOG00000022273	CHD9	96	72.579	ENSSTOG00000001854	CHD8	72	68.559
ENSSTOG00000022273	CHD9	55	35.075	ENSSTOG00000001227	SMARCAD1	50	34.897
ENSSTOG00000022273	CHD9	90	68.625	ENSSTOG00000013382	CHD6	79	62.556
ENSSTOG00000022273	CHD9	57	43.687	ENSSTOG00000014524	SMARCA1	59	39.628
ENSSTOG00000022273	CHD9	55	36.447	ENSSTOG00000021976	HELLS	72	37.097
ENSSTOG00000022273	CHD9	82	76.430	ENSSTOG00000011949	CHD7	91	54.449
ENSSTOG00000022273	CHD9	55	38.797	ENSSTOG00000007032	CHD1L	54	37.009
ENSSTOG00000022273	CHD9	54	31.809	ENSSTOG00000029125	RAD54L	66	32.207

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000022273	CHD9	100	98.398	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSSTOG00000022273	CHD9	99	77.741	ENSAPOG00000023034	chd9	95	70.197	Acanthochromis_polyacanthus
ENSSTOG00000022273	CHD9	99	97.572	ENSAMEG00000016232	CHD9	100	94.833	Ailuropoda_melanoleuca
ENSSTOG00000022273	CHD9	94	75.574	ENSACIG00000004097	chd9	73	61.602	Amphilophus_citrinellus
ENSSTOG00000022273	CHD9	99	77.741	ENSAOCG00000005487	chd9	98	68.585	Amphiprion_ocellaris
ENSSTOG00000022273	CHD9	99	77.741	ENSAPEG00000009859	chd9	98	68.626	Amphiprion_percula
ENSSTOG00000022273	CHD9	95	82.473	ENSATEG00000002748	chd9	99	61.575	Anabas_testudineus
ENSSTOG00000022273	CHD9	99	91.715	ENSAPLG00000002826	CHD9	74	85.453	Anas_platyrhynchos
ENSSTOG00000022273	CHD9	99	90.564	ENSACAG00000016150	CHD9	98	81.470	Anolis_carolinensis
ENSSTOG00000022273	CHD9	99	98.728	ENSANAG00000015630	CHD9	100	96.703	Aotus_nancymaae
ENSSTOG00000022273	CHD9	94	80.000	ENSACLG00000016899	chd9	99	61.515	Astatotilapia_calliptera
ENSSTOG00000022273	CHD9	99	77.027	ENSAMXG00000005652	chd9	68	74.850	Astyanax_mexicanus
ENSSTOG00000022273	CHD9	99	97.572	ENSBTAG00000002287	CHD9	100	94.627	Bos_taurus
ENSSTOG00000022273	CHD9	99	98.497	ENSCJAG00000001573	CHD9	100	97.070	Callithrix_jacchus
ENSSTOG00000022273	CHD9	99	97.341	ENSCAFG00000009699	CHD9	100	95.107	Canis_familiaris
ENSSTOG00000022273	CHD9	99	97.341	ENSCAFG00020002879	CHD9	100	97.436	Canis_lupus_dingo
ENSSTOG00000022273	CHD9	99	97.688	ENSTSYG00000007693	CHD9	100	97.070	Carlito_syrichta
ENSSTOG00000022273	CHD9	91	98.182	ENSCAPG00000011604	CHD9	81	79.916	Cavia_aperea
ENSSTOG00000022273	CHD9	100	91.828	ENSCPOG00000036544	CHD9	100	91.966	Cavia_porcellus
ENSSTOG00000022273	CHD9	99	98.497	ENSCCAG00000036178	CHD9	100	96.337	Cebus_capucinus
ENSSTOG00000022273	CHD9	99	98.382	ENSCATG00000036753	CHD9	100	97.070	Cercocebus_atys
ENSSTOG00000022273	CHD9	100	97.140	ENSCLAG00000007137	CHD9	100	97.140	Chinchilla_lanigera
ENSSTOG00000022273	CHD9	99	98.382	ENSCSAG00000005311	CHD9	100	95.661	Chlorocebus_sabaeus
ENSSTOG00000022273	CHD9	76	97.396	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSSTOG00000022273	CHD9	99	92.520	ENSCPBG00000012459	CHD9	99	91.546	Chrysemys_picta_bellii
ENSSTOG00000022273	CHD9	99	98.266	ENSCANG00000030349	CHD9	100	97.070	Colobus_angolensis_palliatus
ENSSTOG00000022273	CHD9	99	96.301	ENSCGRG00001016150	Chd9	99	91.412	Cricetulus_griseus_chok1gshd
ENSSTOG00000022273	CHD9	100	96.453	ENSCGRG00000012850	Chd9	100	96.453	Cricetulus_griseus_crigri
ENSSTOG00000022273	CHD9	94	79.081	ENSCSEG00000009209	chd9	67	72.361	Cynoglossus_semilaevis
ENSSTOG00000022273	CHD9	96	80.143	ENSCVAG00000016195	chd9	99	60.611	Cyprinodon_variegatus
ENSSTOG00000022273	CHD9	99	75.111	ENSDARG00000074498	chd9	68	73.890	Danio_rerio
ENSSTOG00000022273	CHD9	92	96.500	ENSDNOG00000006045	CHD9	100	94.345	Dasypus_novemcinctus
ENSSTOG00000022273	CHD9	69	95.100	ENSDORG00000008523	-	100	95.200	Dipodomys_ordii
ENSSTOG00000022273	CHD9	94	96.842	ENSETEG00000009565	CHD9	94	96.842	Echinops_telfairi
ENSSTOG00000022273	CHD9	99	97.803	ENSEASG00005014832	CHD9	100	94.831	Equus_asinus_asinus
ENSSTOG00000022273	CHD9	99	97.688	ENSECAG00000011505	CHD9	100	94.592	Equus_caballus
ENSSTOG00000022273	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSSTOG00000022273	CHD9	97	79.860	ENSELUG00000006031	chd9	90	71.150	Esox_lucius
ENSSTOG00000022273	CHD9	99	97.457	ENSFCAG00000022534	CHD9	100	97.070	Felis_catus
ENSSTOG00000022273	CHD9	100	91.790	ENSFALG00000013276	CHD9	99	86.744	Ficedula_albicollis
ENSSTOG00000022273	CHD9	99	96.879	ENSFDAG00000021037	CHD9	100	95.412	Fukomys_damarensis
ENSSTOG00000022273	CHD9	99	77.121	ENSFHEG00000006068	chd9	97	68.513	Fundulus_heteroclitus
ENSSTOG00000022273	CHD9	95	76.157	ENSGMOG00000006040	chd9	83	76.678	Gadus_morhua
ENSSTOG00000022273	CHD9	99	91.715	ENSGALG00000039178	CHD9	98	84.577	Gallus_gallus
ENSSTOG00000022273	CHD9	99	76.633	ENSGAFG00000010014	chd9	98	68.255	Gambusia_affinis
ENSSTOG00000022273	CHD9	94	80.964	ENSGACG00000016694	chd9	96	74.863	Gasterosteus_aculeatus
ENSSTOG00000022273	CHD9	99	98.382	ENSGGOG00000014816	CHD9	100	97.436	Gorilla_gorilla
ENSSTOG00000022273	CHD9	99	75.781	ENSHBUG00000023322	chd9	95	70.629	Haplochromis_burtoni
ENSSTOG00000022273	CHD9	100	97.597	ENSHGLG00000014938	CHD9	100	97.597	Heterocephalus_glaber_female
ENSSTOG00000022273	CHD9	100	97.597	ENSHGLG00100001011	-	100	97.597	Heterocephalus_glaber_male
ENSSTOG00000022273	CHD9	94	81.235	ENSHCOG00000000937	chd9	67	74.924	Hippocampus_comes
ENSSTOG00000022273	CHD9	96	80.638	ENSIPUG00000016448	chd9	97	74.453	Ictalurus_punctatus
ENSSTOG00000022273	CHD9	69	93.838	ENSJJAG00000015741	-	100	94.439	Jaculus_jaculus
ENSSTOG00000022273	CHD9	96	80.856	ENSKMAG00000016784	chd9	96	61.472	Kryptolebias_marmoratus
ENSSTOG00000022273	CHD9	99	74.945	ENSLBEG00000012077	chd9	96	63.362	Labrus_bergylta
ENSSTOG00000022273	CHD9	99	77.675	ENSLACG00000005557	CHD9	73	71.766	Latimeria_chalumnae
ENSSTOG00000022273	CHD9	100	81.818	ENSLOCG00000007225	chd9	99	73.870	Lepisosteus_oculatus
ENSSTOG00000022273	CHD9	99	96.532	ENSLAFG00000015374	CHD9	100	94.178	Loxodonta_africana
ENSSTOG00000022273	CHD9	99	98.382	ENSMFAG00000041354	CHD9	100	97.070	Macaca_fascicularis
ENSSTOG00000022273	CHD9	99	98.382	ENSMMUG00000016310	CHD9	100	97.070	Macaca_mulatta
ENSSTOG00000022273	CHD9	99	98.382	ENSMNEG00000031494	CHD9	100	95.946	Macaca_nemestrina
ENSSTOG00000022273	CHD9	99	98.382	ENSMLEG00000043219	CHD9	100	97.070	Mandrillus_leucophaeus
ENSSTOG00000022273	CHD9	94	82.246	ENSMAMG00000003909	chd9	97	61.151	Mastacembelus_armatus
ENSSTOG00000022273	CHD9	99	77.455	ENSMZEG00005006581	chd9	97	69.353	Maylandia_zebra
ENSSTOG00000022273	CHD9	99	80.730	ENSMGAG00000004642	CHD9	72	80.853	Meleagris_gallopavo
ENSSTOG00000022273	CHD9	100	95.995	ENSMAUG00000011087	-	100	95.995	Mesocricetus_auratus
ENSSTOG00000022273	CHD9	99	98.497	ENSMICG00000016679	CHD9	100	97.070	Microcebus_murinus
ENSSTOG00000022273	CHD9	100	95.995	ENSMOCG00000018583	-	100	95.995	Microtus_ochrogaster
ENSSTOG00000022273	CHD9	95	80.071	ENSMMOG00000016406	chd9	74	63.344	Mola_mola
ENSSTOG00000022273	CHD9	67	96.416	ENSMODG00000013142	-	99	92.380	Monodelphis_domestica
ENSSTOG00000022273	CHD9	95	82.310	ENSMALG00000013306	chd9	73	62.443	Monopterus_albus
ENSSTOG00000022273	CHD9	99	95.260	MGP_CAROLIEiJ_G0031364	Chd9	99	90.538	Mus_caroli
ENSSTOG00000022273	CHD9	100	95.309	ENSMUSG00000056608	Chd9	100	95.309	Mus_musculus
ENSSTOG00000022273	CHD9	99	94.798	MGP_PahariEiJ_G0022964	Chd9	99	88.490	Mus_pahari
ENSSTOG00000022273	CHD9	99	95.145	MGP_SPRETEiJ_G0032483	Chd9	99	90.388	Mus_spretus
ENSSTOG00000022273	CHD9	99	97.688	ENSMPUG00000003285	CHD9	100	94.519	Mustela_putorius_furo
ENSSTOG00000022273	CHD9	99	96.416	ENSMLUG00000004456	CHD9	100	93.931	Myotis_lucifugus
ENSSTOG00000022273	CHD9	100	96.568	ENSNGAG00000019957	-	100	96.568	Nannospalax_galili
ENSSTOG00000022273	CHD9	99	77.298	ENSNBRG00000009423	chd9	97	69.507	Neolamprologus_brichardi
ENSSTOG00000022273	CHD9	99	98.266	ENSNLEG00000001026	CHD9	100	96.052	Nomascus_leucogenys
ENSSTOG00000022273	CHD9	83	95.082	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSSTOG00000022273	CHD9	85	97.714	ENSOPRG00000011168	CHD9	85	97.714	Ochotona_princeps
ENSSTOG00000022273	CHD9	99	97.110	ENSODEG00000004466	CHD9	99	94.062	Octodon_degus
ENSSTOG00000022273	CHD9	96	80.975	ENSONIG00000002816	chd9	87	62.801	Oreochromis_niloticus
ENSSTOG00000022273	CHD9	99	93.195	ENSOANG00000013401	CHD9	100	86.786	Ornithorhynchus_anatinus
ENSSTOG00000022273	CHD9	100	98.398	ENSOCUG00000001016	CHD9	99	96.565	Oryctolagus_cuniculus
ENSSTOG00000022273	CHD9	99	75.893	ENSORLG00000013810	chd9	94	68.855	Oryzias_latipes
ENSSTOG00000022273	CHD9	94	78.954	ENSORLG00020020665	chd9	96	61.331	Oryzias_latipes_hni
ENSSTOG00000022273	CHD9	99	77.137	ENSORLG00015019126	chd9	94	69.077	Oryzias_latipes_hsok
ENSSTOG00000022273	CHD9	95	79.356	ENSOMEG00000015978	chd9	99	62.526	Oryzias_melastigma
ENSSTOG00000022273	CHD9	99	97.688	ENSOGAG00000002110	CHD9	100	94.797	Otolemur_garnettii
ENSSTOG00000022273	CHD9	99	97.572	ENSOARG00000017664	CHD9	100	93.873	Ovis_aries
ENSSTOG00000022273	CHD9	98	95.809	ENSPPAG00000039388	-	100	95.519	Pan_paniscus
ENSSTOG00000022273	CHD9	99	97.457	ENSPPRG00000004801	CHD9	100	96.703	Panthera_pardus
ENSSTOG00000022273	CHD9	99	97.341	ENSPTIG00000021854	CHD9	100	93.726	Panthera_tigris_altaica
ENSSTOG00000022273	CHD9	99	98.266	ENSPTRG00000008113	CHD9	100	97.436	Pan_troglodytes
ENSSTOG00000022273	CHD9	100	98.513	ENSPANG00000019307	CHD9	100	97.070	Papio_anubis
ENSSTOG00000022273	CHD9	99	81.546	ENSPKIG00000021876	chd9	68	76.776	Paramormyrops_kingsleyae
ENSSTOG00000022273	CHD9	96	77.106	ENSPKIG00000025401	-	71	62.724	Paramormyrops_kingsleyae
ENSSTOG00000022273	CHD9	99	88.940	ENSPSIG00000008099	CHD9	99	84.378	Pelodiscus_sinensis
ENSSTOG00000022273	CHD9	53	76.824	ENSPMAG00000006035	-	72	67.578	Petromyzon_marinus
ENSSTOG00000022273	CHD9	100	93.836	ENSPCIG00000017215	CHD9	97	89.817	Phascolarctos_cinereus
ENSSTOG00000022273	CHD9	94	81.697	ENSPFOG00000015839	chd9	95	66.796	Poecilia_formosa
ENSSTOG00000022273	CHD9	99	76.966	ENSPLAG00000011118	chd9	97	68.860	Poecilia_latipinna
ENSSTOG00000022273	CHD9	94	80.121	ENSPMEG00000015106	chd9	94	66.457	Poecilia_mexicana
ENSSTOG00000022273	CHD9	99	76.744	ENSPREG00000006473	chd9	97	68.801	Poecilia_reticulata
ENSSTOG00000022273	CHD9	99	98.382	ENSPPYG00000007348	CHD9	100	95.829	Pongo_abelii
ENSSTOG00000022273	CHD9	99	95.255	ENSPCAG00000007564	CHD9	86	96.140	Procavia_capensis
ENSSTOG00000022273	CHD9	99	98.497	ENSPCOG00000028433	CHD9	100	97.436	Propithecus_coquereli
ENSSTOG00000022273	CHD9	97	90.786	ENSPVAG00000015617	CHD9	98	91.329	Pteropus_vampyrus
ENSSTOG00000022273	CHD9	99	77.455	ENSPNYG00000010947	chd9	97	69.312	Pundamilia_nyererei
ENSSTOG00000022273	CHD9	99	78.202	ENSPNAG00000024141	chd9	68	75.105	Pygocentrus_nattereri
ENSSTOG00000022273	CHD9	99	93.526	ENSRNOG00000049302	Chd9	100	90.152	Rattus_norvegicus
ENSSTOG00000022273	CHD9	99	98.380	ENSRBIG00000035553	CHD9	100	97.070	Rhinopithecus_bieti
ENSSTOG00000022273	CHD9	96	98.454	ENSRROG00000033278	CHD9	100	97.070	Rhinopithecus_roxellana
ENSSTOG00000022273	CHD9	99	98.497	ENSSBOG00000030240	CHD9	100	97.070	Saimiri_boliviensis_boliviensis
ENSSTOG00000022273	CHD9	99	93.426	ENSSHAG00000002719	CHD9	100	87.307	Sarcophilus_harrisii
ENSSTOG00000022273	CHD9	99	80.925	ENSSFOG00015020209	chd9	68	77.030	Scleropages_formosus
ENSSTOG00000022273	CHD9	99	77.978	ENSSFOG00015001327	chd9	67	75.651	Scleropages_formosus
ENSSTOG00000022273	CHD9	99	76.536	ENSSMAG00000008953	chd9	95	68.987	Scophthalmus_maximus
ENSSTOG00000022273	CHD9	99	78.024	ENSSDUG00000006139	chd9	94	70.735	Seriola_dumerili
ENSSTOG00000022273	CHD9	99	78.013	ENSSLDG00000017818	chd9	94	70.712	Seriola_lalandi_dorsalis
ENSSTOG00000022273	CHD9	90	99.486	ENSSARG00000010632	CHD9	71	97.688	Sorex_araneus
ENSSTOG00000022273	CHD9	99	77.741	ENSSPAG00000021649	chd9	67	74.776	Stegastes_partitus
ENSSTOG00000022273	CHD9	99	91.619	ENSTGUG00000007476	CHD9	100	84.627	Taeniopygia_guttata
ENSSTOG00000022273	CHD9	95	81.055	ENSTRUG00000009125	chd9	99	60.334	Takifugu_rubripes
ENSSTOG00000022273	CHD9	68	92.614	ENSTNIG00000003825	chd9	85	80.476	Tetraodon_nigroviridis
ENSSTOG00000022273	CHD9	92	83.935	ENSTBEG00000016052	-	78	96.396	Tupaia_belangeri
ENSSTOG00000022273	CHD9	99	97.688	ENSTTRG00000012674	CHD9	90	94.557	Tursiops_truncatus
ENSSTOG00000022273	CHD9	64	93.895	ENSUAMG00000022706	CHD9	100	97.436	Ursus_americanus
ENSSTOG00000022273	CHD9	99	97.457	ENSUMAG00000004043	CHD9	99	98.401	Ursus_maritimus
ENSSTOG00000022273	CHD9	97	92.932	ENSVPAG00000001374	CHD9	97	93.453	Vicugna_pacos
ENSSTOG00000022273	CHD9	99	97.341	ENSVVUG00000019435	CHD9	100	95.727	Vulpes_vulpes
ENSSTOG00000022273	CHD9	99	86.421	ENSXETG00000000349	chd9	96	76.648	Xenopus_tropicalis
ENSSTOG00000022273	CHD9	94	81.576	ENSXCOG00000012997	chd9	95	70.261	Xiphophorus_couchianus
ENSSTOG00000022273	CHD9	99	76.633	ENSXMAG00000016192	chd9	94	69.854	Xiphophorus_maculatus