EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSTOG00000022475 (Gene tree)
Gene ID
101975784
Gene Symbol
RPA1
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A1
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Plus strand
Length
48462 bases
Position
chrJH393348.1:7946403-7994864
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000016703tRNA_anti-codonPF01336.251.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000028894RPA1-2011776XM_013359761ENSSTOP00000016703592 (aa)-I3MX58
Gene Model
Click here to download ENSSTOG00000022475's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022475's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000022475RPA19860.374ENSAPOG00000011658rpa19859.354Acanthochromis_polyacanthus
ENSSTOG00000022475RPA18961.290ENSAPOG00000019409RPA18661.290Acanthochromis_polyacanthus
ENSSTOG00000022475RPA110082.903ENSAMEG00000007706RPA19982.903Ailuropoda_melanoleuca
ENSSTOG00000022475RPA19656.207ENSACIG00000007277rpa19756.207Amphilophus_citrinellus
ENSSTOG00000022475RPA19855.442ENSACIG00000012881RPA19755.442Amphilophus_citrinellus
ENSSTOG00000022475RPA19861.565ENSAOCG00000023376rpa19860.714Amphiprion_ocellaris
ENSSTOG00000022475RPA19951.577ENSAOCG00000009003RPA19652.208Amphiprion_ocellaris
ENSSTOG00000022475RPA19950.539ENSAPEG00000019132RPA19751.310Amphiprion_percula
ENSSTOG00000022475RPA19861.565ENSAPEG00000008634rpa19860.714Amphiprion_percula
ENSSTOG00000022475RPA19562.434ENSATEG00000022024rpa19662.434Anabas_testudineus
ENSSTOG00000022475RPA19454.319ENSATEG00000006443RPA19154.319Anabas_testudineus
ENSSTOG00000022475RPA19860.704ENSAPLG00000012442RPA19960.704Anas_platyrhynchos
ENSSTOG00000022475RPA19858.564ENSACAG00000014490RPA19859.446Anolis_carolinensis
ENSSTOG00000022475RPA19881.848ENSANAG00000023456RPA19981.848Aotus_nancymaae
ENSSTOG00000022475RPA19562.257ENSACLG00000006640rpa19762.257Astatotilapia_calliptera
ENSSTOG00000022475RPA19754.634ENSACLG00000005223RPA19554.634Astatotilapia_calliptera
ENSSTOG00000022475RPA19560.105ENSAMXG00000008418rpa19558.699Astyanax_mexicanus
ENSSTOG00000022475RPA19884.704ENSBTAG00000009711RPA19884.704Bos_taurus
ENSSTOG00000022475RPA17131.066WBGene00017546rpa-16530.385Caenorhabditis_elegans
ENSSTOG00000022475RPA19981.729ENSCJAG00000001848RPA19881.878Callithrix_jacchus
ENSSTOG00000022475RPA19883.388ENSCAFG00000019249RPA19883.388Canis_familiaris
ENSSTOG00000022475RPA19883.388ENSCAFG00020009847RPA19883.388Canis_lupus_dingo
ENSSTOG00000022475RPA19984.878ENSCHIG00000026308RPA19984.878Capra_hircus
ENSSTOG00000022475RPA19883.087ENSTSYG00000003482-9883.087Carlito_syrichta
ENSSTOG00000022475RPA19881.908ENSCPOG00000000035RPA19881.908Cavia_porcellus
ENSSTOG00000022475RPA19871.803ENSCCAG00000010981RPA19771.803Cebus_capucinus
ENSSTOG00000022475RPA19878.289ENSCLAG00000015045-9878.289Chinchilla_lanigera
ENSSTOG00000022475RPA19883.059ENSCLAG00000005185-9883.059Chinchilla_lanigera
ENSSTOG00000022475RPA19870.867ENSCSAG00000013833RPA19770.867Chlorocebus_sabaeus
ENSSTOG00000022475RPA17388.991ENSCHOG00000009454-9988.991Choloepus_hoffmanni
ENSSTOG00000022475RPA19583.158ENSCHOG00000013540-9683.158Choloepus_hoffmanni
ENSSTOG00000022475RPA19575.263ENSCPBG00000020377RPA19875.263Chrysemys_picta_bellii
ENSSTOG00000022475RPA19941.107ENSCING00000023482-9541.107Ciona_intestinalis
ENSSTOG00000022475RPA19879.112ENSCANG00000030911RPA19979.112Colobus_angolensis_palliatus
ENSSTOG00000022475RPA19882.545ENSCGRG00001008197Rpa19882.545Cricetulus_griseus_chok1gshd
ENSSTOG00000022475RPA18485.602ENSCGRG00000000582Rpa19985.602Cricetulus_griseus_crigri
ENSSTOG00000022475RPA19451.712ENSCSEG00000012726RPA19751.557Cynoglossus_semilaevis
ENSSTOG00000022475RPA19560.035ENSCSEG00000013066rpa19259.083Cynoglossus_semilaevis
ENSSTOG00000022475RPA19153.577ENSCVAG00000013446-8953.577Cyprinodon_variegatus
ENSSTOG00000022475RPA19563.908ENSCVAG00000019431rpa19862.522Cyprinodon_variegatus
ENSSTOG00000022475RPA19562.281ENSDARG00000003938rpa19162.281Danio_rerio
ENSSTOG00000022475RPA19982.362ENSDNOG00000017218RPA19982.362Dasypus_novemcinctus
ENSSTOG00000022475RPA19883.059ENSDORG00000006199Rpa19883.059Dipodomys_ordii
ENSSTOG00000022475RPA19442.014FBgn0010173RpA-708942.734Drosophila_melanogaster
ENSSTOG00000022475RPA18179.707ENSETEG00000017608RPA18179.707Echinops_telfairi
ENSSTOG00000022475RPA19984.390ENSEASG00005009372RPA19884.390Equus_asinus_asinus
ENSSTOG00000022475RPA19884.539ENSECAG00000023886RPA19884.539Equus_caballus
ENSSTOG00000022475RPA16989.209ENSEEUG00000002186-6889.209Erinaceus_europaeus
ENSSTOG00000022475RPA19155.147ENSELUG00000006136RPA19955.147Esox_lucius
ENSSTOG00000022475RPA19461.661ENSELUG00000021071rpa19061.837Esox_lucius
ENSSTOG00000022475RPA19881.938ENSFCAG00000006306RPA19881.938Felis_catus
ENSSTOG00000022475RPA19868.740ENSFALG00000006575RPA19868.740Ficedula_albicollis
ENSSTOG00000022475RPA19883.882ENSFDAG00000007720RPA19883.882Fukomys_damarensis
ENSSTOG00000022475RPA19561.160ENSFHEG00000003580rpa19161.160Fundulus_heteroclitus
ENSSTOG00000022475RPA19856.706ENSGMOG00000010382rpa19556.706Gadus_morhua
ENSSTOG00000022475RPA19869.294ENSGALG00000003072RPA19869.294Gallus_gallus
ENSSTOG00000022475RPA19454.173ENSGAFG00000020953RPA19255.212Gambusia_affinis
ENSSTOG00000022475RPA19562.172ENSGAFG00000012916rpa19162.172Gambusia_affinis
ENSSTOG00000022475RPA19459.823ENSGACG00000010856rpa19159.823Gasterosteus_aculeatus
ENSSTOG00000022475RPA19871.875ENSGAGG00000013611RPA19871.875Gopherus_agassizii
ENSSTOG00000022475RPA19879.770ENSGGOG00000014186RPA19879.770Gorilla_gorilla
ENSSTOG00000022475RPA19959.832ENSHBUG00000017773rpa19559.832Haplochromis_burtoni
ENSSTOG00000022475RPA19851.602ENSHBUG00000009348RPA19851.602Haplochromis_burtoni
ENSSTOG00000022475RPA19884.046ENSHGLG00000008846RPA19884.046Heterocephalus_glaber_female
ENSSTOG00000022475RPA19872.066ENSHGLG00100002005-9872.066Heterocephalus_glaber_male
ENSSTOG00000022475RPA19878.618ENSHGLG00100000799-9878.618Heterocephalus_glaber_male
ENSSTOG00000022475RPA19884.046ENSHGLG00100017755-9884.046Heterocephalus_glaber_male
ENSSTOG00000022475RPA19842.373ENSHCOG00000000351RPA19342.373Hippocampus_comes
ENSSTOG00000022475RPA19560.839ENSHCOG00000001401rpa19161.082Hippocampus_comes
ENSSTOG00000022475RPA19561.121ENSIPUG00000004400rpa19260.590Ictalurus_punctatus
ENSSTOG00000022475RPA19586.140ENSJJAG00000000876Rpa19486.140Jaculus_jaculus
ENSSTOG00000022475RPA19560.351ENSKMAG00000005605rpa19160.702Kryptolebias_marmoratus
ENSSTOG00000022475RPA19953.808ENSKMAG00000000234RPA19753.808Kryptolebias_marmoratus
ENSSTOG00000022475RPA19760.413ENSLBEG00000021604rpa19360.413Labrus_bergylta
ENSSTOG00000022475RPA19661.468ENSLBEG00000002281RPA18361.468Labrus_bergylta
ENSSTOG00000022475RPA18265.191ENSLACG00000007210RPA19965.191Latimeria_chalumnae
ENSSTOG00000022475RPA19567.018ENSLOCG00000006397rpa19267.018Lepisosteus_oculatus
ENSSTOG00000022475RPA19882.982ENSLAFG00000015354RPA19882.982Loxodonta_africana
ENSSTOG00000022475RPA18384.961ENSMFAG00000036138-10084.961Macaca_fascicularis
ENSSTOG00000022475RPA19876.645ENSMMUG00000002442-9776.645Macaca_mulatta
ENSSTOG00000022475RPA19882.566ENSMMUG00000011604-9982.566Macaca_mulatta
ENSSTOG00000022475RPA18581.915ENSMNEG00000029837-9781.915Macaca_nemestrina
ENSSTOG00000022475RPA19584.386ENSMNEG00000031632-9484.386Macaca_nemestrina
ENSSTOG00000022475RPA19876.847ENSMLEG00000038768-9976.847Mandrillus_leucophaeus
ENSSTOG00000022475RPA19562.326ENSMAMG00000020097RPA19551.227Mastacembelus_armatus
ENSSTOG00000022475RPA19463.781ENSMAMG00000017993rpa19662.124Mastacembelus_armatus
ENSSTOG00000022475RPA19754.634ENSMZEG00005024731RPA19554.634Maylandia_zebra
ENSSTOG00000022475RPA19562.500ENSMZEG00005007551rpa19759.162Maylandia_zebra
ENSSTOG00000022475RPA19869.622ENSMGAG00000005315RPA19769.622Meleagris_gallopavo
ENSSTOG00000022475RPA19883.498ENSMAUG00000010474Rpa19983.498Mesocricetus_auratus
ENSSTOG00000022475RPA19883.388ENSMICG00000012867RPA19883.388Microcebus_murinus
ENSSTOG00000022475RPA19882.043ENSMOCG00000013019Rpa19882.043Microtus_ochrogaster
ENSSTOG00000022475RPA19859.253ENSMMOG00000014292rpa19659.253Mola_mola
ENSSTOG00000022475RPA19953.885ENSMMOG00000010868RPA19558.407Mola_mola
ENSSTOG00000022475RPA19878.748ENSMODG00000010549RPA19778.748Monodelphis_domestica
ENSSTOG00000022475RPA19563.492ENSMALG00000011453rpa19163.668Monopterus_albus
ENSSTOG00000022475RPA18960.780ENSMALG00000001208RPA17460.780Monopterus_albus
ENSSTOG00000022475RPA19880.687MGP_CAROLIEiJ_G0016734Rpa19880.687Mus_caroli
ENSSTOG00000022475RPA19878.837ENSMUSG00000000751Rpa19878.837Mus_musculus
ENSSTOG00000022475RPA19881.759MGP_PahariEiJ_G0017871Rpa19881.759Mus_pahari
ENSSTOG00000022475RPA19878.871MGP_SPRETEiJ_G0017577Rpa19878.871Mus_spretus
ENSSTOG00000022475RPA19882.730ENSMPUG00000013119RPA19882.730Mustela_putorius_furo
ENSSTOG00000022475RPA19782.558ENSMLUG00000006113RPA19682.558Myotis_lucifugus
ENSSTOG00000022475RPA19584.912ENSNGAG00000004522Rpa19084.912Nannospalax_galili
ENSSTOG00000022475RPA19562.081ENSNBRG00000020595rpa19662.081Neolamprologus_brichardi
ENSSTOG00000022475RPA19754.045ENSNBRG00000009672RPA19354.045Neolamprologus_brichardi
ENSSTOG00000022475RPA19881.908ENSNLEG00000017149RPA19881.908Nomascus_leucogenys
ENSSTOG00000022475RPA19868.369ENSMEUG00000006714RPA19968.369Notamacropus_eugenii
ENSSTOG00000022475RPA19583.592ENSODEG00000009038RPA19383.592Octodon_degus
ENSSTOG00000022475RPA19562.783ENSONIG00000013135rpa19162.783Oreochromis_niloticus
ENSSTOG00000022475RPA19877.595ENSOANG00000010880RPA19977.759Ornithorhynchus_anatinus
ENSSTOG00000022475RPA19881.013ENSOCUG00000001504RPA19881.013Oryctolagus_cuniculus
ENSSTOG00000022475RPA19951.875ENSORLG00000003368RPA19651.875Oryzias_latipes
ENSSTOG00000022475RPA19562.676ENSORLG00000004856rpa19162.676Oryzias_latipes
ENSSTOG00000022475RPA19950.460ENSORLG00020015284RPA19750.460Oryzias_latipes_hni
ENSSTOG00000022475RPA19562.852ENSORLG00020008980rpa19162.852Oryzias_latipes_hni
ENSSTOG00000022475RPA19562.852ENSORLG00015013982rpa19162.852Oryzias_latipes_hsok
ENSSTOG00000022475RPA17259.540ENSORLG00015005867-9859.540Oryzias_latipes_hsok
ENSSTOG00000022475RPA19952.070ENSORLG00015020383RPA19652.070Oryzias_latipes_hsok
ENSSTOG00000022475RPA19561.444ENSOMEG00000004704rpa19161.444Oryzias_melastigma
ENSSTOG00000022475RPA19456.887ENSOMEG00000011040RPA19556.887Oryzias_melastigma
ENSSTOG00000022475RPA19883.553ENSOGAG00000005581-9883.553Otolemur_garnettii
ENSSTOG00000022475RPA19277.857ENSOGAG00000029379-9783.333Otolemur_garnettii
ENSSTOG00000022475RPA19884.539ENSOARG00000014479RPA19884.539Ovis_aries
ENSSTOG00000022475RPA19882.730ENSPPAG00000039680RPA19882.730Pan_paniscus
ENSSTOG00000022475RPA19881.445ENSPPRG00000011807RPA19881.445Panthera_pardus
ENSSTOG00000022475RPA19881.117ENSPTIG00000007898RPA19881.117Panthera_tigris_altaica
ENSSTOG00000022475RPA19882.730ENSPTRG00000008539RPA19882.730Pan_troglodytes
ENSSTOG00000022475RPA110082.258ENSPANG00000024592RPA19882.401Papio_anubis
ENSSTOG00000022475RPA19259.964ENSPKIG00000008053rpa18860.759Paramormyrops_kingsleyae
ENSSTOG00000022475RPA19771.854ENSPSIG00000015617RPA19971.854Pelodiscus_sinensis
ENSSTOG00000022475RPA19654.766ENSPMGG00000000543RPA19954.957Periophthalmus_magnuspinnatus
ENSSTOG00000022475RPA19860.441ENSPMGG00000011589rpa19560.611Periophthalmus_magnuspinnatus
ENSSTOG00000022475RPA19883.059ENSPEMG00000021061Rpa19883.059Peromyscus_maniculatus_bairdii
ENSSTOG00000022475RPA19877.087ENSPCIG00000019049RPA19877.488Phascolarctos_cinereus
ENSSTOG00000022475RPA19562.500ENSPFOG00000003987rpa19162.500Poecilia_formosa
ENSSTOG00000022475RPA19562.148ENSPLAG00000004984rpa19162.148Poecilia_latipinna
ENSSTOG00000022475RPA18954.514ENSPLAG00000008844-8954.514Poecilia_latipinna
ENSSTOG00000022475RPA18954.167ENSPMEG00000003627-8954.167Poecilia_mexicana
ENSSTOG00000022475RPA19562.676ENSPMEG00000020602rpa19861.620Poecilia_mexicana
ENSSTOG00000022475RPA19352.900ENSPREG00000010174rpa19452.900Poecilia_reticulata
ENSSTOG00000022475RPA19452.782ENSPREG00000010119RPA19252.782Poecilia_reticulata
ENSSTOG00000022475RPA19884.375ENSPCOG00000001799RPA19884.375Propithecus_coquereli
ENSSTOG00000022475RPA19884.046ENSPVAG00000002149RPA19884.046Pteropus_vampyrus
ENSSTOG00000022475RPA19754.309ENSPNYG00000024165RPA19554.309Pundamilia_nyererei
ENSSTOG00000022475RPA19562.676ENSPNYG00000016316rpa19762.257Pundamilia_nyererei
ENSSTOG00000022475RPA19950.487ENSPNAG00000008599rpa19651.299Pygocentrus_nattereri
ENSSTOG00000022475RPA19881.743ENSRNOG00000003123Rpa19881.743Rattus_norvegicus
ENSSTOG00000022475RPA19882.266ENSRBIG00000036587RPA19882.266Rhinopithecus_bieti
ENSSTOG00000022475RPA19878.773ENSRROG00000043278RPA19878.773Rhinopithecus_roxellana
ENSSTOG00000022475RPA17137.644YAR007CRFA16937.644Saccharomyces_cerevisiae
ENSSTOG00000022475RPA19885.324ENSSBOG00000030233RPA19985.324Saimiri_boliviensis_boliviensis
ENSSTOG00000022475RPA19978.140ENSSHAG00000007969RPA19778.303Sarcophilus_harrisii
ENSSTOG00000022475RPA19564.386ENSSFOG00015005362rpa18464.386Scleropages_formosus
ENSSTOG00000022475RPA19352.066ENSSMAG00000019746RPA19252.202Scophthalmus_maximus
ENSSTOG00000022475RPA19451.582ENSSDUG00000016358RPA19252.215Seriola_dumerili
ENSSTOG00000022475RPA19960.201ENSSDUG00000011949rpa19660.201Seriola_dumerili
ENSSTOG00000022475RPA19451.491ENSSLDG00000020784RPA19252.119Seriola_lalandi_dorsalis
ENSSTOG00000022475RPA19960.368ENSSLDG00000011806rpa19660.368Seriola_lalandi_dorsalis
ENSSTOG00000022475RPA18883.871ENSSARG00000007506RPA18983.871Sorex_araneus
ENSSTOG00000022475RPA19570.877ENSSPUG00000007223RPA19370.877Sphenodon_punctatus
ENSSTOG00000022475RPA19854.329ENSSPAG00000011165RPA19454.054Stegastes_partitus
ENSSTOG00000022475RPA19462.124ENSSPAG00000009903rpa19162.124Stegastes_partitus
ENSSTOG00000022475RPA19884.818ENSSSCG00000017822RPA19984.818Sus_scrofa
ENSSTOG00000022475RPA19868.801ENSTGUG00000005775RPA19868.801Taeniopygia_guttata
ENSSTOG00000022475RPA19457.588ENSTRUG00000000405RPA18060.398Takifugu_rubripes
ENSSTOG00000022475RPA19662.414ENSTRUG00000003616rpa19362.414Takifugu_rubripes
ENSSTOG00000022475RPA19762.181ENSTNIG00000016199rpa19362.181Tetraodon_nigroviridis
ENSSTOG00000022475RPA18281.224ENSTBEG00000002709RPA18181.224Tupaia_belangeri
ENSSTOG00000022475RPA19883.717ENSTTRG00000001169RPA19883.717Tursiops_truncatus
ENSSTOG00000022475RPA19095.652ENSUAMG00000015676RPA19892.308Ursus_americanus
ENSSTOG00000022475RPA19884.046ENSUMAG00000009328RPA19884.046Ursus_maritimus
ENSSTOG00000022475RPA19881.414ENSVPAG00000009443RPA19881.414Vicugna_pacos
ENSSTOG00000022475RPA19883.717ENSVVUG00000021715RPA19883.717Vulpes_vulpes
ENSSTOG00000022475RPA19767.110ENSXETG00000013538rpa19667.993Xenopus_tropicalis
ENSSTOG00000022475RPA19853.912ENSXCOG00000009899-9953.912Xiphophorus_couchianus
ENSSTOG00000022475RPA19059.740ENSXCOG00000010068rpa19059.740Xiphophorus_couchianus
ENSSTOG00000022475RPA19860.081ENSXMAG00000010333RPA18563.087Xiphophorus_maculatus
ENSSTOG00000022475RPA19561.579ENSXMAG00000004102rpa19861.579Xiphophorus_maculatus

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