EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000022491 (Gene tree)
Gene ID: 101959056
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 9227 bases
Position: chrJH393351.1:1788197-1797423
Accession: 101959056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017286	RRM_1	PF00076.22	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000022188	RDM1-201	1219	XM_005328145	ENSSTOP00000017286	284 (aa)	XP_005328202	I3MYU0

Gene Model

Click here to download ENSSTOG00000022491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000022491	RDM1	100	83.451	ENSG00000278023	RDM1	100	87.313	Homo_sapiens
ENSSTOG00000022491	RDM1	63	37.912	ENSAPOG00000021886	zgc:103564	70	37.912	Acanthochromis_polyacanthus
ENSSTOG00000022491	RDM1	88	32.937	ENSAPEG00000008929	zgc:103564	93	32.937	Amphiprion_percula
ENSSTOG00000022491	RDM1	86	51.822	ENSAPLG00000004384	RDM1	94	51.822	Anas_platyrhynchos
ENSSTOG00000022491	RDM1	97	47.687	ENSACAG00000012989	-	100	48.043	Anolis_carolinensis
ENSSTOG00000022491	RDM1	100	82.042	ENSANAG00000032752	RDM1	100	85.821	Aotus_nancymaae
ENSSTOG00000022491	RDM1	100	78.246	ENSBTAG00000000030	RDM1	100	78.246	Bos_taurus
ENSSTOG00000022491	RDM1	89	81.746	ENSCJAG00000015031	RDM1	96	87.218	Callithrix_jacchus
ENSSTOG00000022491	RDM1	88	71.484	ENSCAFG00000015160	-	100	71.484	Canis_familiaris
ENSSTOG00000022491	RDM1	99	78.369	ENSCHIG00000020607	RDM1	100	78.369	Capra_hircus
ENSSTOG00000022491	RDM1	98	71.119	ENSCPOG00000001495	-	96	71.119	Cavia_porcellus
ENSSTOG00000022491	RDM1	96	80.515	ENSCCAG00000035763	RDM1	100	86.567	Cebus_capucinus
ENSSTOG00000022491	RDM1	100	83.451	ENSCATG00000044451	RDM1	100	87.407	Cercocebus_atys
ENSSTOG00000022491	RDM1	94	78.571	ENSCSAG00000006209	RDM1	100	78.571	Chlorocebus_sabaeus
ENSSTOG00000022491	RDM1	78	54.260	ENSCPBG00000009105	RDM1	93	53.061	Chrysemys_picta_bellii
ENSSTOG00000022491	RDM1	100	82.394	ENSCANG00000041322	RDM1	100	85.926	Colobus_angolensis_palliatus
ENSSTOG00000022491	RDM1	96	73.162	ENSCGRG00001015927	Rdm1	99	72.792	Cricetulus_griseus_chok1gshd
ENSSTOG00000022491	RDM1	90	35.798	ENSCVAG00000001956	zgc:103564	98	35.165	Cyprinodon_variegatus
ENSSTOG00000022491	RDM1	89	79.051	ENSDNOG00000045224	-	94	79.051	Dasypus_novemcinctus
ENSSTOG00000022491	RDM1	67	77.835	ENSEASG00005010554	RDM1	69	77.835	Equus_asinus_asinus
ENSSTOG00000022491	RDM1	89	79.608	ENSECAG00000022182	RDM1	91	79.608	Equus_caballus
ENSSTOG00000022491	RDM1	89	70.238	ENSEEUG00000006127	RDM1	100	70.238	Erinaceus_europaeus
ENSSTOG00000022491	RDM1	81	79.565	ENSFCAG00000043429	RDM1	96	85.714	Felis_catus
ENSSTOG00000022491	RDM1	97	52.347	ENSGALG00000000243	RDM1	97	52.347	Gallus_gallus
ENSSTOG00000022491	RDM1	82	51.502	ENSGAGG00000000293	-	78	52.209	Gopherus_agassizii
ENSSTOG00000022491	RDM1	100	83.099	ENSGGOG00000010584	RDM1	100	87.313	Gorilla_gorilla
ENSSTOG00000022491	RDM1	82	37.131	ENSHCOG00000002518	-	85	37.131	Hippocampus_comes
ENSSTOG00000022491	RDM1	100	74.476	ENSLAFG00000029300	RDM1	100	74.476	Loxodonta_africana
ENSSTOG00000022491	RDM1	100	83.099	ENSMFAG00000032968	RDM1	100	87.407	Macaca_fascicularis
ENSSTOG00000022491	RDM1	100	83.451	ENSMMUG00000006847	RDM1	100	87.407	Macaca_mulatta
ENSSTOG00000022491	RDM1	100	83.099	ENSMNEG00000039977	RDM1	100	87.407	Macaca_nemestrina
ENSSTOG00000022491	RDM1	100	83.099	ENSMLEG00000041158	RDM1	100	87.407	Mandrillus_leucophaeus
ENSSTOG00000022491	RDM1	91	47.490	ENSMGAG00000008774	RDM1	96	51.429	Meleagris_gallopavo
ENSSTOG00000022491	RDM1	99	72.792	ENSMAUG00000018559	Rdm1	99	72.792	Mesocricetus_auratus
ENSSTOG00000022491	RDM1	100	82.746	ENSMICG00000038651	RDM1	100	87.681	Microcebus_murinus
ENSSTOG00000022491	RDM1	97	69.928	ENSMOCG00000015095	Rdm1	99	69.928	Microtus_ochrogaster
ENSSTOG00000022491	RDM1	97	62.681	ENSMODG00000011101	RDM1	100	62.681	Monodelphis_domestica
ENSSTOG00000022491	RDM1	98	73.835	MGP_CAROLIEiJ_G0017226	Rdm1	98	73.835	Mus_caroli
ENSSTOG00000022491	RDM1	98	74.194	ENSMUSG00000010362	Rdm1	98	74.194	Mus_musculus
ENSSTOG00000022491	RDM1	99	73.944	MGP_PahariEiJ_G0018356	Rdm1	99	73.944	Mus_pahari
ENSSTOG00000022491	RDM1	98	74.194	MGP_SPRETEiJ_G0018069	Rdm1	98	74.194	Mus_spretus
ENSSTOG00000022491	RDM1	100	79.720	ENSMPUG00000008363	RDM1	100	79.720	Mustela_putorius_furo
ENSSTOG00000022491	RDM1	100	84.155	ENSNLEG00000014173	RDM1	100	88.148	Nomascus_leucogenys
ENSSTOG00000022491	RDM1	88	63.347	ENSMEUG00000015826	RDM1	100	63.347	Notamacropus_eugenii
ENSSTOG00000022491	RDM1	89	77.075	ENSOCUG00000022704	RDM1	97	77.075	Oryctolagus_cuniculus
ENSSTOG00000022491	RDM1	100	79.930	ENSOGAG00000011332	RDM1	100	79.930	Otolemur_garnettii
ENSSTOG00000022491	RDM1	100	83.451	ENSPPAG00000029969	RDM1	100	83.451	Pan_paniscus
ENSSTOG00000022491	RDM1	100	83.803	ENSPTRG00000009031	RDM1	100	88.060	Pan_troglodytes
ENSSTOG00000022491	RDM1	100	83.099	ENSPANG00000022933	RDM1	100	86.667	Papio_anubis
ENSSTOG00000022491	RDM1	96	72.426	ENSPEMG00000018985	Rdm1	99	72.183	Peromyscus_maniculatus_bairdii
ENSSTOG00000022491	RDM1	100	82.394	ENSPPYG00000008198	RDM1	100	82.394	Pongo_abelii
ENSSTOG00000022491	RDM1	100	80.986	ENSPCOG00000017995	RDM1	100	83.333	Propithecus_coquereli
ENSSTOG00000022491	RDM1	88	81.275	ENSPVAG00000001116	RDM1	100	81.275	Pteropus_vampyrus
ENSSTOG00000022491	RDM1	98	73.835	ENSRNOG00000020751	Rdm1	98	73.835	Rattus_norvegicus
ENSSTOG00000022491	RDM1	100	82.042	ENSRBIG00000030000	RDM1	100	86.667	Rhinopithecus_bieti
ENSSTOG00000022491	RDM1	100	82.394	ENSRROG00000035242	RDM1	100	86.667	Rhinopithecus_roxellana
ENSSTOG00000022491	RDM1	97	66.304	ENSSHAG00000013584	RDM1	100	66.304	Sarcophilus_harrisii
ENSSTOG00000022491	RDM1	92	49.425	ENSSPUG00000010941	RDM1	96	48.689	Sphenodon_punctatus
ENSSTOG00000022491	RDM1	93	36.604	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSSTOG00000022491	RDM1	79	69.643	ENSSSCG00000017574	-	93	69.643	Sus_scrofa
ENSSTOG00000022491	RDM1	89	61.508	ENSTBEG00000010030	RDM1	99	61.508	Tupaia_belangeri
ENSSTOG00000022491	RDM1	100	80.634	ENSUAMG00000027279	RDM1	100	80.634	Ursus_americanus
ENSSTOG00000022491	RDM1	100	80.634	ENSUMAG00000015423	RDM1	98	80.634	Ursus_maritimus