EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000022617 (Gene tree)
Gene ID: 101973781
Gene Symbol: -
Alias: -
Full Name: probable tRNA pseudouridine synthase 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 3065 bases
Position: chrJH393290.1:6550744-6553808
Accession: 101973781
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000014883	TruB_N	PF01509.18	4.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000029064	-	2176	XM_005319585	ENSSTOP00000014883	327 (aa)	XP_005319642	I3MRY8

Gene Model

Click here to download ENSSTOG00000022617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000022617	-	99	98.160	ENSSTOG00000008024	-	99	98.160
ENSSTOG00000022617	-	93	31.046	ENSSTOG00000003641	TRUB1	80	31.046

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000022617	-	99	80.734	ENSG00000167112	TRUB2	99	80.734	Homo_sapiens
ENSSTOG00000022617	-	84	43.525	ENSAPOG00000018284	-	76	58.394	Acanthochromis_polyacanthus
ENSSTOG00000022617	-	63	58.049	ENSAPOG00000015733	trub2	74	58.049	Acanthochromis_polyacanthus
ENSSTOG00000022617	-	99	82.209	ENSAMEG00000015395	TRUB2	98	82.209	Ailuropoda_melanoleuca
ENSSTOG00000022617	-	84	53.763	ENSACIG00000016500	trub2	84	53.763	Amphilophus_citrinellus
ENSSTOG00000022617	-	84	57.348	ENSAOCG00000002330	trub2	82	57.348	Amphiprion_ocellaris
ENSSTOG00000022617	-	84	57.706	ENSAPEG00000013177	trub2	82	57.706	Amphiprion_percula
ENSSTOG00000022617	-	85	55.000	ENSATEG00000011371	trub2	88	55.000	Anabas_testudineus
ENSSTOG00000022617	-	88	57.785	ENSAPLG00000009254	TRUB2	94	58.621	Anas_platyrhynchos
ENSSTOG00000022617	-	89	64.041	ENSACAG00000007331	TRUB2	89	64.041	Anolis_carolinensis
ENSSTOG00000022617	-	93	85.246	ENSANAG00000036234	TRUB2	98	85.246	Aotus_nancymaae
ENSSTOG00000022617	-	92	50.987	ENSACLG00000010793	trub2	90	50.987	Astatotilapia_calliptera
ENSSTOG00000022617	-	93	51.803	ENSAMXG00000031679	trub2	87	51.803	Astyanax_mexicanus
ENSSTOG00000022617	-	54	82.584	ENSBTAG00000055269	-	81	82.584	Bos_taurus
ENSSTOG00000022617	-	97	82.445	ENSCJAG00000020009	TRUB2	96	82.445	Callithrix_jacchus
ENSSTOG00000022617	-	99	81.288	ENSCAFG00000020068	TRUB2	98	81.288	Canis_familiaris
ENSSTOG00000022617	-	53	83.237	ENSCAFG00020017325	-	97	83.237	Canis_lupus_dingo
ENSSTOG00000022617	-	99	80.428	ENSCHIG00000021160	TRUB2	99	80.428	Capra_hircus
ENSSTOG00000022617	-	99	82.875	ENSTSYG00000034163	TRUB2	99	82.875	Carlito_syrichta
ENSSTOG00000022617	-	90	79.932	ENSCAPG00000000223	TRUB2	99	79.932	Cavia_aperea
ENSSTOG00000022617	-	99	80.734	ENSCPOG00000013535	TRUB2	98	80.734	Cavia_porcellus
ENSSTOG00000022617	-	97	80.503	ENSCCAG00000028463	-	98	79.630	Cebus_capucinus
ENSSTOG00000022617	-	96	83.810	ENSCCAG00000026531	-	96	83.810	Cebus_capucinus
ENSSTOG00000022617	-	99	81.957	ENSCATG00000038234	TRUB2	99	81.957	Cercocebus_atys
ENSSTOG00000022617	-	98	81.677	ENSCLAG00000001702	TRUB2	98	81.677	Chinchilla_lanigera
ENSSTOG00000022617	-	99	76.829	ENSCSAG00000014117	TRUB2	99	76.829	Chlorocebus_sabaeus
ENSSTOG00000022617	-	100	82.263	ENSCHOG00000001555	TRUB2	99	82.263	Choloepus_hoffmanni
ENSSTOG00000022617	-	89	65.753	ENSCPBG00000025186	TRUB2	86	65.753	Chrysemys_picta_bellii
ENSSTOG00000022617	-	79	34.615	ENSCSAVG00000003930	-	80	34.615	Ciona_savignyi
ENSSTOG00000022617	-	99	74.312	ENSCANG00000016135	TRUB2	99	74.312	Colobus_angolensis_palliatus
ENSSTOG00000022617	-	99	80.734	ENSCGRG00001024441	Trub2	99	80.734	Cricetulus_griseus_chok1gshd
ENSSTOG00000022617	-	99	80.734	ENSCGRG00000005633	Trub2	99	80.734	Cricetulus_griseus_crigri
ENSSTOG00000022617	-	84	53.597	ENSCSEG00000001331	trub2	83	53.597	Cynoglossus_semilaevis
ENSSTOG00000022617	-	84	54.348	ENSCVAG00000009901	trub2	83	54.348	Cyprinodon_variegatus
ENSSTOG00000022617	-	84	53.597	ENSDARG00000028379	trub2	79	53.597	Danio_rerio
ENSSTOG00000022617	-	99	80.428	ENSDNOG00000045679	-	99	80.428	Dasypus_novemcinctus
ENSSTOG00000022617	-	91	58.333	ENSDNOG00000043967	-	91	58.333	Dasypus_novemcinctus
ENSSTOG00000022617	-	99	82.263	ENSDORG00000016222	Trub2	97	85.993	Dipodomys_ordii
ENSSTOG00000022617	-	83	35.273	FBgn0033060	CG7849	86	35.273	Drosophila_melanogaster
ENSSTOG00000022617	-	96	80.251	ENSETEG00000009114	TRUB2	98	80.251	Echinops_telfairi
ENSSTOG00000022617	-	79	41.837	ENSEBUG00000015723	trub2	86	41.837	Eptatretus_burgeri
ENSSTOG00000022617	-	99	84.098	ENSEASG00005016819	TRUB2	99	84.098	Equus_asinus_asinus
ENSSTOG00000022617	-	99	84.404	ENSECAG00000023520	TRUB2	99	84.404	Equus_caballus
ENSSTOG00000022617	-	95	84.345	ENSEEUG00000008908	TRUB2	95	84.345	Erinaceus_europaeus
ENSSTOG00000022617	-	84	53.952	ENSELUG00000002376	trub2	91	53.952	Esox_lucius
ENSSTOG00000022617	-	100	81.402	ENSFCAG00000005839	TRUB2	98	81.402	Felis_catus
ENSSTOG00000022617	-	90	58.086	ENSFALG00000001364	TRUB2	98	58.086	Ficedula_albicollis
ENSSTOG00000022617	-	99	82.927	ENSFDAG00000021374	TRUB2	98	82.927	Fukomys_damarensis
ENSSTOG00000022617	-	84	51.079	ENSFHEG00000014655	trub2	82	51.079	Fundulus_heteroclitus
ENSSTOG00000022617	-	84	46.182	ENSGMOG00000000981	trub2	92	46.182	Gadus_morhua
ENSSTOG00000022617	-	88	61.458	ENSGALG00000004920	TRUB2	71	61.458	Gallus_gallus
ENSSTOG00000022617	-	84	55.755	ENSGAFG00000010107	trub2	84	54.770	Gambusia_affinis
ENSSTOG00000022617	-	84	54.839	ENSGACG00000001476	trub2	84	54.839	Gasterosteus_aculeatus
ENSSTOG00000022617	-	88	66.207	ENSGAGG00000022872	TRUB2	86	66.207	Gopherus_agassizii
ENSSTOG00000022617	-	99	81.902	ENSGGOG00000014780	TRUB2	98	81.902	Gorilla_gorilla
ENSSTOG00000022617	-	92	51.645	ENSHBUG00000022384	trub2	90	51.645	Haplochromis_burtoni
ENSSTOG00000022617	-	99	82.371	ENSHGLG00000016715	TRUB2	99	82.371	Heterocephalus_glaber_female
ENSSTOG00000022617	-	99	82.371	ENSHGLG00100016548	TRUB2	99	82.371	Heterocephalus_glaber_male
ENSSTOG00000022617	-	84	55.957	ENSHCOG00000017748	trub2	85	55.957	Hippocampus_comes
ENSSTOG00000022617	-	89	52.218	ENSIPUG00000017725	hdhd3	51	52.218	Ictalurus_punctatus
ENSSTOG00000022617	-	99	73.700	ENSJJAG00000019181	Trub2	99	73.700	Jaculus_jaculus
ENSSTOG00000022617	-	84	54.874	ENSKMAG00000007861	trub2	83	54.874	Kryptolebias_marmoratus
ENSSTOG00000022617	-	95	50.476	ENSLBEG00000000907	trub2	92	50.476	Labrus_bergylta
ENSSTOG00000022617	-	87	63.636	ENSLACG00000001515	TRUB2	85	63.636	Latimeria_chalumnae
ENSSTOG00000022617	-	88	57.439	ENSLOCG00000000885	trub2	95	57.439	Lepisosteus_oculatus
ENSSTOG00000022617	-	91	86.288	ENSLAFG00000002174	TRUB2	99	86.288	Loxodonta_africana
ENSSTOG00000022617	-	99	81.346	ENSMFAG00000000881	TRUB2	99	81.346	Macaca_fascicularis
ENSSTOG00000022617	-	99	81.346	ENSMMUG00000014146	TRUB2	99	81.346	Macaca_mulatta
ENSSTOG00000022617	-	99	81.040	ENSMNEG00000011189	TRUB2	99	81.040	Macaca_nemestrina
ENSSTOG00000022617	-	99	81.957	ENSMLEG00000037270	TRUB2	99	81.957	Mandrillus_leucophaeus
ENSSTOG00000022617	-	84	55.396	ENSMAMG00000023643	trub2	92	55.396	Mastacembelus_armatus
ENSSTOG00000022617	-	92	51.316	ENSMZEG00005016018	trub2	90	51.316	Maylandia_zebra
ENSSTOG00000022617	-	61	65.829	ENSMGAG00000003894	TRUB2	99	65.829	Meleagris_gallopavo
ENSSTOG00000022617	-	99	81.957	ENSMAUG00000010403	Trub2	99	81.957	Mesocricetus_auratus
ENSSTOG00000022617	-	99	83.742	ENSMICG00000047032	TRUB2	98	83.742	Microcebus_murinus
ENSSTOG00000022617	-	91	86.957	ENSMOCG00000014291	Trub2	98	86.957	Microtus_ochrogaster
ENSSTOG00000022617	-	84	56.835	ENSMMOG00000021674	trub2	86	56.835	Mola_mola
ENSSTOG00000022617	-	89	74.061	ENSMODG00000005940	TRUB2	99	74.061	Monodelphis_domestica
ENSSTOG00000022617	-	84	58.511	ENSMALG00000021231	trub2	83	58.511	Monopterus_albus
ENSSTOG00000022617	-	99	80.734	MGP_CAROLIEiJ_G0023368	Trub2	99	80.734	Mus_caroli
ENSSTOG00000022617	-	99	80.734	ENSMUSG00000039826	Trub2	99	80.734	Mus_musculus
ENSSTOG00000022617	-	99	80.734	MGP_PahariEiJ_G0024826	Trub2	99	80.734	Mus_pahari
ENSSTOG00000022617	-	99	81.040	MGP_SPRETEiJ_G0024286	Trub2	99	81.040	Mus_spretus
ENSSTOG00000022617	-	99	81.040	ENSMPUG00000013206	TRUB2	90	81.040	Mustela_putorius_furo
ENSSTOG00000022617	-	99	81.902	ENSMLUG00000005256	TRUB2	98	81.902	Myotis_lucifugus
ENSSTOG00000022617	-	99	80.734	ENSNGAG00000018679	Trub2	99	80.734	Nannospalax_galili
ENSSTOG00000022617	-	84	54.480	ENSNBRG00000016294	trub2	84	54.480	Neolamprologus_brichardi
ENSSTOG00000022617	-	99	80.122	ENSNLEG00000017556	TRUB2	99	80.122	Nomascus_leucogenys
ENSSTOG00000022617	-	88	75.000	ENSMEUG00000000484	TRUB2	93	75.000	Notamacropus_eugenii
ENSSTOG00000022617	-	99	78.834	ENSOPRG00000001981	TRUB2	99	78.834	Ochotona_princeps
ENSSTOG00000022617	-	98	81.250	ENSODEG00000017292	TRUB2	98	81.250	Octodon_degus
ENSSTOG00000022617	-	84	53.763	ENSONIG00000004230	trub2	84	53.763	Oreochromis_niloticus
ENSSTOG00000022617	-	57	75.936	ENSOANG00000029023	-	83	75.936	Ornithorhynchus_anatinus
ENSSTOG00000022617	-	99	82.263	ENSOCUG00000026296	TRUB2	90	82.263	Oryctolagus_cuniculus
ENSSTOG00000022617	-	97	48.750	ENSORLG00000020011	trub2	95	49.375	Oryzias_latipes
ENSSTOG00000022617	-	91	50.505	ENSORLG00020011028	trub2	87	50.505	Oryzias_latipes_hni
ENSSTOG00000022617	-	98	48.750	ENSORLG00015007494	trub2	97	48.750	Oryzias_latipes_hsok
ENSSTOG00000022617	-	84	56.835	ENSOMEG00000006702	trub2	84	56.835	Oryzias_melastigma
ENSSTOG00000022617	-	99	80.734	ENSOARG00000010579	-	99	80.734	Ovis_aries
ENSSTOG00000022617	-	77	82.143	ENSOARG00000003785	-	100	82.143	Ovis_aries
ENSSTOG00000022617	-	99	81.957	ENSPPAG00000043146	TRUB2	99	81.957	Pan_paniscus
ENSSTOG00000022617	-	100	81.402	ENSPPRG00000006307	TRUB2	98	81.402	Panthera_pardus
ENSSTOG00000022617	-	100	81.707	ENSPTIG00000012366	TRUB2	98	81.707	Panthera_tigris_altaica
ENSSTOG00000022617	-	99	81.957	ENSPTRG00000021423	TRUB2	99	81.957	Pan_troglodytes
ENSSTOG00000022617	-	99	81.957	ENSPTRG00000052151	-	99	81.957	Pan_troglodytes
ENSSTOG00000022617	-	99	82.263	ENSPANG00000025856	TRUB2	99	82.263	Papio_anubis
ENSSTOG00000022617	-	85	53.763	ENSPKIG00000019769	trub2	91	53.763	Paramormyrops_kingsleyae
ENSSTOG00000022617	-	88	61.092	ENSPSIG00000015701	TRUB2	97	61.092	Pelodiscus_sinensis
ENSSTOG00000022617	-	90	49.169	ENSPMGG00000010206	trub2	94	49.169	Periophthalmus_magnuspinnatus
ENSSTOG00000022617	-	99	81.098	ENSPEMG00000017893	Trub2	99	81.098	Peromyscus_maniculatus_bairdii
ENSSTOG00000022617	-	89	75.085	ENSPCIG00000026731	TRUB2	95	75.085	Phascolarctos_cinereus
ENSSTOG00000022617	-	84	54.643	ENSPFOG00000018018	trub2	75	53.684	Poecilia_formosa
ENSSTOG00000022617	-	84	54.643	ENSPLAG00000010484	trub2	81	53.684	Poecilia_latipinna
ENSSTOG00000022617	-	91	52.492	ENSPMEG00000012913	trub2	88	52.492	Poecilia_mexicana
ENSSTOG00000022617	-	84	53.929	ENSPREG00000002549	trub2	84	52.982	Poecilia_reticulata
ENSSTOG00000022617	-	98	81.562	ENSPPYG00000019650	TRUB2	98	81.562	Pongo_abelii
ENSSTOG00000022617	-	100	83.283	ENSPCAG00000015068	TRUB2	100	83.283	Procavia_capensis
ENSSTOG00000022617	-	99	83.742	ENSPCOG00000017100	TRUB2	98	83.742	Propithecus_coquereli
ENSSTOG00000022617	-	91	85.570	ENSPVAG00000001224	TRUB2	100	85.570	Pteropus_vampyrus
ENSSTOG00000022617	-	92	51.316	ENSPNYG00000013666	trub2	90	51.316	Pundamilia_nyererei
ENSSTOG00000022617	-	85	53.405	ENSPNAG00000017292	trub2	80	54.122	Pygocentrus_nattereri
ENSSTOG00000022617	-	96	81.905	ENSRNOG00000043189	Trub2	98	81.905	Rattus_norvegicus
ENSSTOG00000022617	-	99	74.312	ENSRBIG00000006965	TRUB2	99	74.312	Rhinopithecus_bieti
ENSSTOG00000022617	-	99	82.569	ENSRROG00000042928	TRUB2	99	82.569	Rhinopithecus_roxellana
ENSSTOG00000022617	-	97	83.386	ENSSBOG00000022439	TRUB2	96	83.386	Saimiri_boliviensis_boliviensis
ENSSTOG00000022617	-	85	56.318	ENSSFOG00015013391	trub2	89	56.318	Scleropages_formosus
ENSSTOG00000022617	-	84	56.835	ENSSMAG00000020820	trub2	84	56.835	Scophthalmus_maximus
ENSSTOG00000022617	-	97	50.926	ENSSDUG00000016928	trub2	96	51.084	Seriola_dumerili
ENSSTOG00000022617	-	97	51.703	ENSSLDG00000024701	trub2	96	51.703	Seriola_lalandi_dorsalis
ENSSTOG00000022617	-	89	59.932	ENSSPUG00000015515	TRUB2	87	59.932	Sphenodon_punctatus
ENSSTOG00000022617	-	84	58.007	ENSSPAG00000017865	trub2	84	58.007	Stegastes_partitus
ENSSTOG00000022617	-	99	83.180	ENSSSCG00000005645	TRUB2	99	82.712	Sus_scrofa
ENSSTOG00000022617	-	80	64.231	ENSTGUG00000003704	TRUB2	99	64.231	Taeniopygia_guttata
ENSSTOG00000022617	-	85	53.004	ENSTRUG00000015499	trub2	86	53.004	Takifugu_rubripes
ENSSTOG00000022617	-	85	53.737	ENSTNIG00000014721	trub2	96	53.737	Tetraodon_nigroviridis
ENSSTOG00000022617	-	69	82.222	ENSTBEG00000000586	TRUB2	100	82.222	Tupaia_belangeri
ENSSTOG00000022617	-	99	79.511	ENSTTRG00000016486	TRUB2	99	79.511	Tursiops_truncatus
ENSSTOG00000022617	-	99	82.515	ENSUAMG00000020276	TRUB2	95	82.515	Ursus_americanus
ENSSTOG00000022617	-	99	82.515	ENSUMAG00000022051	TRUB2	95	82.515	Ursus_maritimus
ENSSTOG00000022617	-	95	64.103	ENSVPAG00000005793	TRUB2	99	64.103	Vicugna_pacos
ENSSTOG00000022617	-	94	83.062	ENSVVUG00000013451	TRUB2	88	83.062	Vulpes_vulpes
ENSSTOG00000022617	-	94	59.871	ENSXETG00000003973	trub2	94	59.871	Xenopus_tropicalis
ENSSTOG00000022617	-	84	54.676	ENSXCOG00000008759	trub2	83	54.676	Xiphophorus_couchianus
ENSSTOG00000022617	-	84	54.676	ENSXMAG00000015478	trub2	83	54.676	Xiphophorus_maculatus