EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000022811 (Gene tree)
Gene ID: 101976473
Gene Symbol: RBM4
Alias: LARK|RBM4A|ZCCHC21|ZCRB3A
Full Name: RNA-binding protein 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 8148 bases
Position: chrJH393409.1:2960063-2968210
Accession: 101976473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000020949	zf-CCHC	PF00098.23	1.6e-07	1	1
ENSSTOP00000020949	RRM_5	PF13893.6	3.2e-08	1	2
ENSSTOP00000020949	RRM_5	PF13893.6	3.2e-08	2	2
ENSSTOP00000032626	RRM_5	PF13893.6	1.5e-06	1	1
ENSSTOP00000032626	RRM_1	PF00076.22	1.3e-34	1	2
ENSSTOP00000032626	RRM_1	PF00076.22	1.3e-34	2	2
ENSSTOP00000020949	RRM_1	PF00076.22	1.6e-34	1	2
ENSSTOP00000020949	RRM_1	PF00076.22	1.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000022124	RBM4-201	1867	XM_013361990	ENSSTOP00000020949	365 (aa)	XP_013217444	I3N9A3
ENSSTOT00000033355	RBM4-202	1154	XM_013361991	ENSSTOP00000032626	143 (aa)	XP_013217445	A0A287DGD1

Gene Model

Click here to download ENSSTOG00000022811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000022811	RBM4	97	98.551	ENSSTOG00000011226	RBM4B	100	87.397
ENSSTOG00000022811	RBM4	97	43.885	ENSSTOG00000009796	RBM14	94	41.071
ENSSTOG00000022811	RBM4	92	38.983	ENSSTOG00000004389	SRSF7	80	35.780
ENSSTOG00000022811	RBM4	59	32.143	ENSSTOG00000010866	SRSF6	62	32.143
ENSSTOG00000022811	RBM4	98	30.625	ENSSTOG00000008309	TIA1	85	30.625
ENSSTOG00000022811	RBM4	94	31.034	ENSSTOG00000025095	TIAL1	69	31.034
ENSSTOG00000022811	RBM4	94	30.065	ENSSTOG00000027271	ELAVL4	85	30.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000022811	RBM4	100	100.000	ENSG00000173933	RBM4	100	100.000	Homo_sapiens
ENSSTOG00000022811	RBM4	97	98.551	ENSG00000173914	RBM4B	97	98.551	Homo_sapiens
ENSSTOG00000022811	RBM4	99	73.497	ENSG00000248643	RBM14-RBM4	100	74.317	Homo_sapiens
ENSSTOG00000022811	RBM4	100	99.726	ENSAMEG00000010914	RBM4	100	99.726	Ailuropoda_melanoleuca
ENSSTOG00000022811	RBM4	97	98.551	ENSAMEG00000010906	RBM4B	100	87.671	Ailuropoda_melanoleuca
ENSSTOG00000022811	RBM4	97	98.551	ENSANAG00000023478	RBM4B	97	98.551	Aotus_nancymaae
ENSSTOG00000022811	RBM4	100	96.503	ENSANAG00000033986	-	87	96.503	Aotus_nancymaae
ENSSTOG00000022811	RBM4	100	97.260	ENSBTAG00000031688	RBM4	100	97.260	Bos_taurus
ENSSTOG00000022811	RBM4	97	98.551	ENSBTAG00000000423	RBM4B	100	87.945	Bos_taurus
ENSSTOG00000022811	RBM4	97	98.551	ENSCJAG00000013666	RBM4B	97	98.551	Callithrix_jacchus
ENSSTOG00000022811	RBM4	100	99.726	ENSCAFG00000012388	RBM4	100	99.726	Canis_familiaris
ENSSTOG00000022811	RBM4	97	98.551	ENSCAFG00000012378	RBM4B	100	87.397	Canis_familiaris
ENSSTOG00000022811	RBM4	100	99.726	ENSCAFG00020015515	RBM4	100	99.726	Canis_lupus_dingo
ENSSTOG00000022811	RBM4	97	98.551	ENSCAFG00020015519	RBM4B	100	87.397	Canis_lupus_dingo
ENSSTOG00000022811	RBM4	100	97.260	ENSCHIG00000020613	RBM4	100	97.260	Capra_hircus
ENSSTOG00000022811	RBM4	97	98.551	ENSCHIG00000008907	RBM4B	100	87.945	Capra_hircus
ENSSTOG00000022811	RBM4	66	79.253	ENSTSYG00000009580	RBM4B	96	78.423	Carlito_syrichta
ENSSTOG00000022811	RBM4	94	87.850	ENSTSYG00000036168	-	86	87.850	Carlito_syrichta
ENSSTOG00000022811	RBM4	100	99.452	ENSCAPG00000016600	RBM4	100	99.452	Cavia_aperea
ENSSTOG00000022811	RBM4	97	98.551	ENSCAPG00000009570	RBM4B	100	87.123	Cavia_aperea
ENSSTOG00000022811	RBM4	97	98.551	ENSCPOG00000013689	RBM4B	100	87.123	Cavia_porcellus
ENSSTOG00000022811	RBM4	100	99.452	ENSCPOG00000013194	RBM4	100	99.452	Cavia_porcellus
ENSSTOG00000022811	RBM4	100	97.203	ENSCCAG00000007508	-	100	97.203	Cebus_capucinus
ENSSTOG00000022811	RBM4	97	98.551	ENSCCAG00000016501	RBM4B	97	98.551	Cebus_capucinus
ENSSTOG00000022811	RBM4	99	72.535	ENSCCAG00000023319	-	100	74.129	Cebus_capucinus
ENSSTOG00000022811	RBM4	97	98.551	ENSCATG00000035353	RBM4B	97	98.551	Cercocebus_atys
ENSSTOG00000022811	RBM4	97	98.551	ENSCLAG00000015287	RBM4B	100	87.123	Chinchilla_lanigera
ENSSTOG00000022811	RBM4	100	99.301	ENSCLAG00000014756	RBM4	100	99.301	Chinchilla_lanigera
ENSSTOG00000022811	RBM4	97	98.551	ENSCSAG00000008361	RBM4B	100	87.123	Chlorocebus_sabaeus
ENSSTOG00000022811	RBM4	62	98.238	ENSCHOG00000009753	RBM14-RBM4	100	98.238	Choloepus_hoffmanni
ENSSTOG00000022811	RBM4	97	98.551	ENSCHOG00000002892	RBM4B	100	88.219	Choloepus_hoffmanni
ENSSTOG00000022811	RBM4	100	93.706	ENSCPBG00000023800	-	100	73.298	Chrysemys_picta_bellii
ENSSTOG00000022811	RBM4	97	98.551	ENSCANG00000021868	RBM4B	97	98.551	Colobus_angolensis_palliatus
ENSSTOG00000022811	RBM4	97	98.551	ENSCGRG00001024693	Rbm4b	100	85.479	Cricetulus_griseus_chok1gshd
ENSSTOG00000022811	RBM4	100	98.601	ENSCGRG00001016609	-	100	98.601	Cricetulus_griseus_chok1gshd
ENSSTOG00000022811	RBM4	97	98.551	ENSCGRG00000012112	Rbm4b	100	85.479	Cricetulus_griseus_crigri
ENSSTOG00000022811	RBM4	100	98.601	ENSCGRG00000010183	-	100	98.601	Cricetulus_griseus_crigri
ENSSTOG00000022811	RBM4	97	97.101	ENSDNOG00000045639	-	100	86.575	Dasypus_novemcinctus
ENSSTOG00000022811	RBM4	100	99.178	ENSDNOG00000032390	RBM4	100	99.178	Dasypus_novemcinctus
ENSSTOG00000022811	RBM4	97	98.551	ENSDNOG00000019500	-	100	87.671	Dasypus_novemcinctus
ENSSTOG00000022811	RBM4	97	98.551	ENSDORG00000029108	Rbm4b	100	85.479	Dipodomys_ordii
ENSSTOG00000022811	RBM4	100	97.902	ENSDORG00000004538	-	100	97.902	Dipodomys_ordii
ENSSTOG00000022811	RBM4	62	63.436	ENSETEG00000018142	-	100	63.877	Echinops_telfairi
ENSSTOG00000022811	RBM4	97	98.551	ENSEASG00005005068	RBM4B	100	87.397	Equus_asinus_asinus
ENSSTOG00000022811	RBM4	100	97.808	ENSEASG00005005064	RBM4	100	97.808	Equus_asinus_asinus
ENSSTOG00000022811	RBM4	97	98.551	ENSECAG00000022987	RBM4B	100	87.123	Equus_caballus
ENSSTOG00000022811	RBM4	100	97.808	ENSECAG00000022940	RBM4	100	97.808	Equus_caballus
ENSSTOG00000022811	RBM4	97	99.275	ENSEEUG00000000058	RBM4B	100	87.397	Erinaceus_europaeus
ENSSTOG00000022811	RBM4	97	98.551	ENSFCAG00000007394	RBM4B	97	98.551	Felis_catus
ENSSTOG00000022811	RBM4	100	100.000	ENSFCAG00000029651	RBM4	100	100.000	Felis_catus
ENSSTOG00000022811	RBM4	97	97.101	ENSFALG00000002073	-	100	67.655	Ficedula_albicollis
ENSSTOG00000022811	RBM4	97	98.551	ENSFDAG00000015530	RBM4B	100	87.123	Fukomys_damarensis
ENSSTOG00000022811	RBM4	100	99.301	ENSFDAG00000005447	RBM4	100	99.301	Fukomys_damarensis
ENSSTOG00000022811	RBM4	99	92.366	ENSFDAG00000013661	-	96	92.366	Fukomys_damarensis
ENSSTOG00000022811	RBM4	97	97.101	ENSGALG00000037946	-	100	74.734	Gallus_gallus
ENSSTOG00000022811	RBM4	97	97.101	ENSGALG00000040489	-	84	97.101	Gallus_gallus
ENSSTOG00000022811	RBM4	97	96.377	ENSGAGG00000008553	-	100	73.629	Gopherus_agassizii
ENSSTOG00000022811	RBM4	98	78.571	ENSGGOG00000043023	-	98	79.562	Gorilla_gorilla
ENSSTOG00000022811	RBM4	100	95.804	ENSGGOG00000011698	RBM4B	97	98.551	Gorilla_gorilla
ENSSTOG00000022811	RBM4	100	98.630	ENSHGLG00000009991	RBM4	100	98.630	Heterocephalus_glaber_female
ENSSTOG00000022811	RBM4	97	65.942	ENSHGLG00000000117	-	95	65.479	Heterocephalus_glaber_female
ENSSTOG00000022811	RBM4	97	88.406	ENSHGLG00000002853	-	100	73.425	Heterocephalus_glaber_female
ENSSTOG00000022811	RBM4	97	98.551	ENSHGLG00000016412	-	100	87.397	Heterocephalus_glaber_female
ENSSTOG00000022811	RBM4	100	98.601	ENSHGLG00100003854	RBM4	100	98.601	Heterocephalus_glaber_male
ENSSTOG00000022811	RBM4	97	88.406	ENSHGLG00100020033	-	100	74.499	Heterocephalus_glaber_male
ENSSTOG00000022811	RBM4	97	98.551	ENSHGLG00100003978	-	100	86.612	Heterocephalus_glaber_male
ENSSTOG00000022811	RBM4	97	94.891	ENSJJAG00000020870	Rbm4b	100	83.562	Jaculus_jaculus
ENSSTOG00000022811	RBM4	93	75.188	ENSJJAG00000003168	-	92	73.881	Jaculus_jaculus
ENSSTOG00000022811	RBM4	100	95.890	ENSLAFG00000028147	-	100	95.890	Loxodonta_africana
ENSSTOG00000022811	RBM4	97	98.551	ENSLAFG00000002285	RBM4B	100	84.658	Loxodonta_africana
ENSSTOG00000022811	RBM4	100	96.503	ENSMFAG00000033927	RBM4B	97	98.551	Macaca_fascicularis
ENSSTOG00000022811	RBM4	97	98.551	ENSMNEG00000043371	RBM4B	97	98.551	Macaca_nemestrina
ENSSTOG00000022811	RBM4	100	96.503	ENSMLEG00000028563	RBM4B	97	98.551	Mandrillus_leucophaeus
ENSSTOG00000022811	RBM4	97	98.551	ENSMAUG00000017027	Rbm4b	100	84.384	Mesocricetus_auratus
ENSSTOG00000022811	RBM4	100	97.902	ENSMICG00000047975	-	99	97.902	Microcebus_murinus
ENSSTOG00000022811	RBM4	99	97.872	ENSMICG00000003820	RBM4B	97	98.551	Microcebus_murinus
ENSSTOG00000022811	RBM4	100	95.804	ENSMICG00000003817	-	100	95.804	Microcebus_murinus
ENSSTOG00000022811	RBM4	97	98.551	ENSMOCG00000001835	Rbm4b	100	85.205	Microtus_ochrogaster
ENSSTOG00000022811	RBM4	97	96.377	ENSMODG00000008056	-	100	91.848	Monodelphis_domestica
ENSSTOG00000022811	RBM4	100	98.601	MGP_CAROLIEiJ_G0022516	-	100	98.601	Mus_caroli
ENSSTOG00000022811	RBM4	99	68.392	MGP_CAROLIEiJ_G0022514	-	100	69.210	Mus_caroli
ENSSTOG00000022811	RBM4	97	98.551	MGP_CAROLIEiJ_G0022515	Rbm4b	100	85.753	Mus_caroli
ENSSTOG00000022811	RBM4	100	95.902	ENSMUSG00000096370	Gm21992	100	95.902	Mus_musculus
ENSSTOG00000022811	RBM4	100	98.601	ENSMUSG00000094936	Rbm4	100	98.837	Mus_musculus
ENSSTOG00000022811	RBM4	100	95.804	ENSMUSG00000033760	Rbm4b	94	95.804	Mus_musculus
ENSSTOG00000022811	RBM4	100	96.175	MGP_PahariEiJ_G0014011	-	100	96.175	Mus_pahari
ENSSTOG00000022811	RBM4	100	98.601	MGP_PahariEiJ_G0014013	-	100	98.601	Mus_pahari
ENSSTOG00000022811	RBM4	97	98.551	MGP_PahariEiJ_G0014012	Rbm4b	100	85.205	Mus_pahari
ENSSTOG00000022811	RBM4	100	79.573	MGP_SPRETEiJ_G0023430	-	100	79.573	Mus_spretus
ENSSTOG00000022811	RBM4	100	79.573	MGP_SPRETEiJ_G0023428	-	94	79.573	Mus_spretus
ENSSTOG00000022811	RBM4	100	73.958	MGP_SPRETEiJ_G0023429	-	100	74.653	Mus_spretus
ENSSTOG00000022811	RBM4	100	99.452	ENSMPUG00000003443	RBM4	100	99.452	Mustela_putorius_furo
ENSSTOG00000022811	RBM4	97	98.551	ENSMPUG00000003450	RBM4B	100	87.945	Mustela_putorius_furo
ENSSTOG00000022811	RBM4	97	98.551	ENSMLUG00000001290	RBM4B	100	85.479	Myotis_lucifugus
ENSSTOG00000022811	RBM4	97	99.275	ENSMLUG00000004076	RBM4	95	96.970	Myotis_lucifugus
ENSSTOG00000022811	RBM4	97	98.551	ENSNGAG00000016292	Rbm4b	100	85.753	Nannospalax_galili
ENSSTOG00000022811	RBM4	100	100.000	ENSNLEG00000035021	RBM4	100	100.000	Nomascus_leucogenys
ENSSTOG00000022811	RBM4	100	95.804	ENSNLEG00000006213	RBM4B	97	98.551	Nomascus_leucogenys
ENSSTOG00000022811	RBM4	62	87.225	ENSMEUG00000005739	-	100	87.225	Notamacropus_eugenii
ENSSTOG00000022811	RBM4	97	97.826	ENSMEUG00000001445	-	100	89.041	Notamacropus_eugenii
ENSSTOG00000022811	RBM4	97	98.551	ENSOPRG00000009158	RBM4B	100	87.671	Ochotona_princeps
ENSSTOG00000022811	RBM4	100	98.904	ENSOPRG00000009149	RBM4	100	98.904	Ochotona_princeps
ENSSTOG00000022811	RBM4	100	76.923	ENSODEG00000006635	-	100	76.923	Octodon_degus
ENSSTOG00000022811	RBM4	96	86.861	ENSODEG00000001866	-	100	79.452	Octodon_degus
ENSSTOG00000022811	RBM4	97	99.275	ENSODEG00000017696	-	100	87.397	Octodon_degus
ENSSTOG00000022811	RBM4	100	97.203	ENSODEG00000020039	-	100	97.203	Octodon_degus
ENSSTOG00000022811	RBM4	100	95.804	ENSODEG00000019143	-	100	95.804	Octodon_degus
ENSSTOG00000022811	RBM4	97	98.551	ENSOANG00000011036	-	100	84.658	Ornithorhynchus_anatinus
ENSSTOG00000022811	RBM4	97	98.551	ENSOANG00000003143	-	84	78.356	Ornithorhynchus_anatinus
ENSSTOG00000022811	RBM4	100	100.000	ENSOCUG00000004731	RBM4	100	100.000	Oryctolagus_cuniculus
ENSSTOG00000022811	RBM4	97	98.551	ENSOCUG00000006695	LARK	100	87.397	Oryctolagus_cuniculus
ENSSTOG00000022811	RBM4	100	99.452	ENSOGAG00000015647	RBM4	100	99.452	Otolemur_garnettii
ENSSTOG00000022811	RBM4	97	98.551	ENSOGAG00000015648	RBM4B	100	87.397	Otolemur_garnettii
ENSSTOG00000022811	RBM4	97	98.551	ENSOARG00000007759	RBM4B	100	88.219	Ovis_aries
ENSSTOG00000022811	RBM4	97	100.000	ENSOARG00000007700	RBM4	100	93.973	Ovis_aries
ENSSTOG00000022811	RBM4	100	95.804	ENSPPAG00000015125	RBM4B	97	98.551	Pan_paniscus
ENSSTOG00000022811	RBM4	97	98.551	ENSPPRG00000003388	RBM4B	97	98.551	Panthera_pardus
ENSSTOG00000022811	RBM4	100	100.000	ENSPPRG00000003533	RBM4	100	100.000	Panthera_pardus
ENSSTOG00000022811	RBM4	100	99.301	ENSPTIG00000016180	RBM4	100	99.301	Panthera_tigris_altaica
ENSSTOG00000022811	RBM4	97	98.551	ENSPTIG00000015426	RBM4B	97	98.551	Panthera_tigris_altaica
ENSSTOG00000022811	RBM4	100	95.804	ENSPTRG00000003935	RBM4B	97	98.551	Pan_troglodytes
ENSSTOG00000022811	RBM4	97	98.551	ENSPANG00000020672	RBM4B	97	98.551	Papio_anubis
ENSSTOG00000022811	RBM4	97	95.652	ENSPSIG00000003430	-	100	73.404	Pelodiscus_sinensis
ENSSTOG00000022811	RBM4	97	95.652	ENSPSIG00000003477	-	95	77.055	Pelodiscus_sinensis
ENSSTOG00000022811	RBM4	97	98.551	ENSPEMG00000009144	Rbm4b	100	86.027	Peromyscus_maniculatus_bairdii
ENSSTOG00000022811	RBM4	100	98.356	ENSPPYG00000003012	RBM4	100	98.356	Pongo_abelii
ENSSTOG00000022811	RBM4	97	98.551	ENSPPYG00000003010	RBM4B	100	87.123	Pongo_abelii
ENSSTOG00000022811	RBM4	100	96.986	ENSPCAG00000003393	-	100	96.986	Procavia_capensis
ENSSTOG00000022811	RBM4	97	98.551	ENSPCOG00000027885	RBM4B	97	98.551	Propithecus_coquereli
ENSSTOG00000022811	RBM4	100	98.904	ENSPVAG00000010486	RBM4	100	98.904	Pteropus_vampyrus
ENSSTOG00000022811	RBM4	97	98.551	ENSPVAG00000010487	RBM4B	100	87.671	Pteropus_vampyrus
ENSSTOG00000022811	RBM4	97	98.551	ENSRNOG00000061795	Rbm4b	100	86.027	Rattus_norvegicus
ENSSTOG00000022811	RBM4	100	98.601	ENSRNOG00000050741	Rbm4	100	98.601	Rattus_norvegicus
ENSSTOG00000022811	RBM4	97	98.551	ENSRBIG00000019394	RBM4B	97	98.551	Rhinopithecus_bieti
ENSSTOG00000022811	RBM4	97	100.000	ENSRROG00000032796	-	90	100.000	Rhinopithecus_roxellana
ENSSTOG00000022811	RBM4	97	98.551	ENSRROG00000032850	RBM4B	97	98.551	Rhinopithecus_roxellana
ENSSTOG00000022811	RBM4	97	97.826	ENSSBOG00000034474	RBM4B	97	97.826	Saimiri_boliviensis_boliviensis
ENSSTOG00000022811	RBM4	97	98.551	ENSSHAG00000008386	-	100	87.123	Sarcophilus_harrisii
ENSSTOG00000022811	RBM4	97	98.551	ENSSARG00000010710	RBM4B	100	87.671	Sorex_araneus
ENSSTOG00000022811	RBM4	100	99.726	ENSSSCG00000032437	RBM4	100	99.726	Sus_scrofa
ENSSTOG00000022811	RBM4	97	96.377	ENSTGUG00000016779	-	94	77.778	Taeniopygia_guttata
ENSSTOG00000022811	RBM4	96	100.000	ENSTBEG00000003727	-	70	100.000	Tupaia_belangeri
ENSSTOG00000022811	RBM4	97	98.551	ENSTBEG00000003748	RBM4B	100	85.753	Tupaia_belangeri
ENSSTOG00000022811	RBM4	97	97.826	ENSTTRG00000011166	RBM4B	100	87.397	Tursiops_truncatus
ENSSTOG00000022811	RBM4	100	97.808	ENSTTRG00000011164	RBM4	100	97.808	Tursiops_truncatus
ENSSTOG00000022811	RBM4	100	100.000	ENSUAMG00000014882	RBM4	100	100.000	Ursus_americanus
ENSSTOG00000022811	RBM4	97	98.551	ENSUAMG00000004745	RBM4B	100	87.945	Ursus_americanus
ENSSTOG00000022811	RBM4	100	99.301	ENSUMAG00000011738	-	100	99.301	Ursus_maritimus
ENSSTOG00000022811	RBM4	97	97.826	ENSVPAG00000001950	RBM4B	100	87.397	Vicugna_pacos
ENSSTOG00000022811	RBM4	100	97.260	ENSVPAG00000001949	RBM4	100	97.260	Vicugna_pacos
ENSSTOG00000022811	RBM4	99	89.362	ENSVVUG00000011717	-	96	89.362	Vulpes_vulpes
ENSSTOG00000022811	RBM4	100	99.178	ENSVVUG00000010622	RBM4	100	99.178	Vulpes_vulpes
ENSSTOG00000022811	RBM4	97	98.551	ENSVVUG00000010619	RBM4B	100	87.397	Vulpes_vulpes