EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000022853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1254 bases
Position: chrJH393379.1:1329606-1330859
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027525	zf-RNPHF	PF08080.12	6.3e-23	1	1
ENSSTOP00000027525	RRM_1	PF00076.22	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000021865	-	1194	-	ENSSTOP00000027525	397 (aa)	-	A0A287D1Z3

Gene Model

Click here to download ENSSTOG00000022853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000022853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000022853	-	95	64.115	ENSSTOG00000029028	HNRNPH2	97	63.761
ENSSTOG00000022853	-	51	63.636	ENSSTOG00000011676	HNRNPH3	93	50.305
ENSSTOG00000022853	-	100	76.077	ENSSTOG00000023820	-	100	76.077
ENSSTOG00000022853	-	100	89.183	ENSSTOG00000025560	-	100	89.183
ENSSTOG00000022853	-	86	35.989	ENSSTOG00000011569	GRSF1	92	35.989
ENSSTOG00000022853	-	95	65.789	ENSSTOG00000016376	HNRNPH1	97	65.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000022853	-	100	87.740	ENSG00000169813	HNRNPF	100	91.837	Homo_sapiens
ENSSTOG00000022853	-	100	87.981	ENSAMEG00000018983	HNRNPF	100	87.981	Ailuropoda_melanoleuca
ENSSTOG00000022853	-	88	73.656	ENSANAG00000033452	-	89	73.656	Aotus_nancymaae
ENSSTOG00000022853	-	100	84.615	ENSANAG00000033285	-	100	84.615	Aotus_nancymaae
ENSSTOG00000022853	-	100	87.500	ENSBTAG00000008853	HNRNPF	100	87.500	Bos_taurus
ENSSTOG00000022853	-	100	71.905	ENSBTAG00000020513	-	100	71.905	Bos_taurus
ENSSTOG00000022853	-	100	87.740	ENSCJAG00000008291	HNRNPF	100	87.740	Callithrix_jacchus
ENSSTOG00000022853	-	100	87.981	ENSCAFG00000007044	HNRNPF	100	87.981	Canis_familiaris
ENSSTOG00000022853	-	97	65.931	ENSCHIG00000022971	-	99	65.931	Capra_hircus
ENSSTOG00000022853	-	100	87.500	ENSCHIG00000006714	HNRNPF	100	87.500	Capra_hircus
ENSSTOG00000022853	-	100	87.019	ENSTSYG00000030439	-	100	87.019	Carlito_syrichta
ENSSTOG00000022853	-	100	75.061	ENSTSYG00000002112	-	100	75.061	Carlito_syrichta
ENSSTOG00000022853	-	99	88.675	ENSCAPG00000011521	HNRNPF	99	88.675	Cavia_aperea
ENSSTOG00000022853	-	99	88.675	ENSCPOG00000003678	HNRNPF	99	88.675	Cavia_porcellus
ENSSTOG00000022853	-	100	87.500	ENSCCAG00000031457	-	100	87.500	Cebus_capucinus
ENSSTOG00000022853	-	100	73.827	ENSCCAG00000028687	-	100	73.827	Cebus_capucinus
ENSSTOG00000022853	-	99	88.675	ENSCLAG00000005161	HNRNPF	99	88.675	Chinchilla_lanigera
ENSSTOG00000022853	-	100	87.019	ENSCANG00000003086	-	100	87.019	Colobus_angolensis_palliatus
ENSSTOG00000022853	-	100	87.981	ENSCGRG00001016276	Hnrnpf	100	87.981	Cricetulus_griseus_chok1gshd
ENSSTOG00000022853	-	94	66.240	ENSCGRG00001016206	-	88	66.240	Cricetulus_griseus_chok1gshd
ENSSTOG00000022853	-	100	83.654	ENSDNOG00000030849	-	100	83.654	Dasypus_novemcinctus
ENSSTOG00000022853	-	100	79.808	ENSDORG00000005431	-	100	79.808	Dipodomys_ordii
ENSSTOG00000022853	-	100	83.010	ENSDORG00000008260	-	100	83.010	Dipodomys_ordii
ENSSTOG00000022853	-	100	87.019	ENSDORG00000024298	-	100	87.019	Dipodomys_ordii
ENSSTOG00000022853	-	100	84.856	ENSDORG00000024936	-	100	84.856	Dipodomys_ordii
ENSSTOG00000022853	-	100	87.981	ENSEASG00005006903	HNRNPF	100	87.981	Equus_asinus_asinus
ENSSTOG00000022853	-	100	85.096	ENSECAG00000003229	HNRNPF	100	85.096	Equus_caballus
ENSSTOG00000022853	-	100	87.981	ENSFCAG00000028219	-	100	87.981	Felis_catus
ENSSTOG00000022853	-	99	88.675	ENSFDAG00000011431	-	99	88.675	Fukomys_damarensis
ENSSTOG00000022853	-	95	80.151	ENSFDAG00000007858	-	98	80.151	Fukomys_damarensis
ENSSTOG00000022853	-	99	73.464	ENSFDAG00000015308	-	99	73.464	Fukomys_damarensis
ENSSTOG00000022853	-	90	87.533	ENSGGOG00000010867	HNRNPF	93	87.533	Gorilla_gorilla
ENSSTOG00000022853	-	99	88.434	ENSHGLG00000000147	-	99	88.434	Heterocephalus_glaber_female
ENSSTOG00000022853	-	99	79.277	ENSHGLG00000017607	-	100	79.277	Heterocephalus_glaber_female
ENSSTOG00000022853	-	100	85.096	ENSHGLG00000010276	-	100	85.096	Heterocephalus_glaber_female
ENSSTOG00000022853	-	90	84.615	ENSHGLG00000014139	-	97	84.615	Heterocephalus_glaber_female
ENSSTOG00000022853	-	99	84.819	ENSHGLG00100019572	-	99	84.819	Heterocephalus_glaber_male
ENSSTOG00000022853	-	99	84.337	ENSHGLG00100019558	-	100	84.337	Heterocephalus_glaber_male
ENSSTOG00000022853	-	95	81.360	ENSHGLG00100019910	-	100	81.360	Heterocephalus_glaber_male
ENSSTOG00000022853	-	90	77.454	ENSHGLG00100010905	-	97	77.454	Heterocephalus_glaber_male
ENSSTOG00000022853	-	97	88.308	ENSHGLG00100020825	-	100	88.308	Heterocephalus_glaber_male
ENSSTOG00000022853	-	100	67.157	ENSJJAG00000000554	-	100	67.157	Jaculus_jaculus
ENSSTOG00000022853	-	100	72.596	ENSJJAG00000022288	-	100	72.596	Jaculus_jaculus
ENSSTOG00000022853	-	100	79.808	ENSJJAG00000017385	-	100	79.808	Jaculus_jaculus
ENSSTOG00000022853	-	98	83.646	ENSJJAG00000014334	-	99	83.646	Jaculus_jaculus
ENSSTOG00000022853	-	100	59.069	ENSJJAG00000014424	-	100	59.069	Jaculus_jaculus
ENSSTOG00000022853	-	99	85.577	ENSLAFG00000000424	HNRNPF	99	85.577	Loxodonta_africana
ENSSTOG00000022853	-	100	87.740	ENSMFAG00000021184	HNRNPF	100	87.740	Macaca_fascicularis
ENSSTOG00000022853	-	100	87.740	ENSMMUG00000020982	HNRNPF	100	87.740	Macaca_mulatta
ENSSTOG00000022853	-	100	87.740	ENSMLEG00000023515	HNRNPF	100	87.740	Mandrillus_leucophaeus
ENSSTOG00000022853	-	100	87.981	ENSMAUG00000007892	Hnrnpf	100	87.981	Mesocricetus_auratus
ENSSTOG00000022853	-	99	70.361	ENSMICG00000043739	-	99	70.361	Microcebus_murinus
ENSSTOG00000022853	-	99	71.090	ENSMICG00000044171	-	99	71.090	Microcebus_murinus
ENSSTOG00000022853	-	100	86.779	ENSMOCG00000014915	Hnrnpf	100	86.779	Microtus_ochrogaster
ENSSTOG00000022853	-	100	87.981	ENSMUSG00000042079	Hnrnpf	100	88.942	Mus_musculus
ENSSTOG00000022853	-	100	87.019	MGP_PahariEiJ_G0026903	-	100	87.019	Mus_pahari
ENSSTOG00000022853	-	96	88.250	ENSMPUG00000017283	HNRNPF	99	88.250	Mustela_putorius_furo
ENSSTOG00000022853	-	100	85.851	ENSMLUG00000007261	HNRNPF	100	85.851	Myotis_lucifugus
ENSSTOG00000022853	-	100	64.951	ENSNGAG00000009482	-	100	64.951	Nannospalax_galili
ENSSTOG00000022853	-	100	71.394	ENSNGAG00000014079	-	100	71.394	Nannospalax_galili
ENSSTOG00000022853	-	100	87.500	ENSNGAG00000010409	-	100	87.500	Nannospalax_galili
ENSSTOG00000022853	-	100	87.500	ENSNLEG00000019098	HNRNPF	100	87.500	Nomascus_leucogenys
ENSSTOG00000022853	-	99	88.675	ENSODEG00000019266	-	99	88.675	Octodon_degus
ENSSTOG00000022853	-	99	82.567	ENSODEG00000002359	-	99	82.567	Octodon_degus
ENSSTOG00000022853	-	100	88.221	ENSOCUG00000024719	-	100	88.221	Oryctolagus_cuniculus
ENSSTOG00000022853	-	100	83.894	ENSOCUG00000024604	-	100	83.894	Oryctolagus_cuniculus
ENSSTOG00000022853	-	100	83.654	ENSOGAG00000030480	-	100	83.654	Otolemur_garnettii
ENSSTOG00000022853	-	99	81.731	ENSOGAG00000013734	-	99	81.731	Otolemur_garnettii
ENSSTOG00000022853	-	91	86.842	ENSOARG00000003995	HNRNPF	93	86.842	Ovis_aries
ENSSTOG00000022853	-	100	72.596	ENSOARG00000016658	-	100	72.596	Ovis_aries
ENSSTOG00000022853	-	100	87.981	ENSPPRG00000021222	HNRNPF	100	87.981	Panthera_pardus
ENSSTOG00000022853	-	100	87.981	ENSPTIG00000009644	HNRNPF	100	87.981	Panthera_tigris_altaica
ENSSTOG00000022853	-	100	87.740	ENSPTRG00000002446	HNRNPF	100	87.740	Pan_troglodytes
ENSSTOG00000022853	-	100	87.500	ENSPANG00000002212	HNRNPF	100	87.500	Papio_anubis
ENSSTOG00000022853	-	100	87.740	ENSPPYG00000002212	HNRNPF	100	87.740	Pongo_abelii
ENSSTOG00000022853	-	100	84.892	ENSPCAG00000013169	HNRNPF	100	84.892	Procavia_capensis
ENSSTOG00000022853	-	100	87.019	ENSPVAG00000011646	HNRNPF	100	87.019	Pteropus_vampyrus
ENSSTOG00000022853	-	100	87.981	ENSRNOG00000014562	Hnrnpf	100	87.981	Rattus_norvegicus
ENSSTOG00000022853	-	100	87.740	ENSRROG00000001235	HNRNPF	100	87.740	Rhinopithecus_roxellana
ENSSTOG00000022853	-	100	87.740	ENSSBOG00000018361	HNRNPF	100	87.740	Saimiri_boliviensis_boliviensis
ENSSTOG00000022853	-	100	87.500	ENSSARG00000010059	HNRNPF	100	87.500	Sorex_araneus
ENSSTOG00000022853	-	100	52.300	ENSSSCG00000024956	-	96	52.300	Sus_scrofa
ENSSTOG00000022853	-	100	87.500	ENSSSCG00000010203	-	100	87.500	Sus_scrofa
ENSSTOG00000022853	-	97	64.268	ENSTBEG00000016094	HNRNPF	100	64.268	Tupaia_belangeri
ENSSTOG00000022853	-	100	87.981	ENSUAMG00000000455	HNRNPF	100	87.981	Ursus_americanus
ENSSTOG00000022853	-	100	87.981	ENSUMAG00000016485	HNRNPF	100	87.981	Ursus_maritimus
ENSSTOG00000022853	-	100	87.981	ENSVVUG00000021261	HNRNPF	100	87.981	Vulpes_vulpes