EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000023023 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1912 bases
Position: chrJH393498.1:70075-71986
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000025469	NOG1	PF06858.14	5.9e-22	1	1
ENSSTOP00000024161	NOG1	PF06858.14	6.5e-22	1	1
ENSSTOP00000025469	MMR_HSR1	PF01926.23	1.8e-17	1	1
ENSSTOP00000024161	MMR_HSR1	PF01926.23	2e-17	1	1
ENSSTOP00000025469	NOGCT	PF08155.11	1.5e-21	1	1
ENSSTOP00000024161	NOGCT	PF08155.11	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000023997	-	1881	-	ENSSTOP00000024161	626 (aa)	-	A0A287CSA0
ENSSTOT00000040557	-	1764	-	ENSSTOP00000025469	587 (aa)	-	A0A287CW30

Gene Model

Click here to download ENSSTOG00000023023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000023023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000023023	-	100	90.852	ENSSTOG00000010042	-	100	90.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000023023	-	100	86.593	ENSG00000107937	GTPBP4	100	86.593	Homo_sapiens
ENSSTOG00000023023	-	100	73.975	ENSAPOG00000020433	gtpbp4	100	70.551	Acanthochromis_polyacanthus
ENSSTOG00000023023	-	100	85.331	ENSAMEG00000001845	GTPBP4	100	85.331	Ailuropoda_melanoleuca
ENSSTOG00000023023	-	100	70.189	ENSACIG00000018629	gtpbp4	100	70.189	Amphilophus_citrinellus
ENSSTOG00000023023	-	100	74.290	ENSAOCG00000000427	gtpbp4	93	74.290	Amphiprion_ocellaris
ENSSTOG00000023023	-	100	74.448	ENSAPEG00000002544	gtpbp4	100	74.448	Amphiprion_percula
ENSSTOG00000023023	-	100	75.237	ENSATEG00000012635	gtpbp4	95	75.237	Anabas_testudineus
ENSSTOG00000023023	-	52	75.529	ENSAPLG00000013790	-	100	75.529	Anas_platyrhynchos
ENSSTOG00000023023	-	100	77.445	ENSACAG00000002943	GTPBP4	100	77.445	Anolis_carolinensis
ENSSTOG00000023023	-	86	82.370	ENSANAG00000029209	-	100	82.370	Aotus_nancymaae
ENSSTOG00000023023	-	99	76.108	ENSANAG00000022188	-	99	76.582	Aotus_nancymaae
ENSSTOG00000023023	-	76	79.241	ENSACLG00000026330	gtpbp4	92	80.667	Astatotilapia_calliptera
ENSSTOG00000023023	-	100	74.448	ENSAMXG00000019771	gtpbp4	100	74.448	Astyanax_mexicanus
ENSSTOG00000023023	-	100	85.331	ENSBTAG00000014917	GTPBP4	100	85.331	Bos_taurus
ENSSTOG00000023023	-	99	47.515	WBGene00020297	nog-1	99	47.515	Caenorhabditis_elegans
ENSSTOG00000023023	-	100	86.321	ENSCJAG00000008494	-	100	86.950	Callithrix_jacchus
ENSSTOG00000023023	-	100	84.906	ENSCJAG00000022962	-	100	85.535	Callithrix_jacchus
ENSSTOG00000023023	-	92	86.007	ENSCAFG00000005536	GTPBP4	99	86.007	Canis_familiaris
ENSSTOG00000023023	-	100	85.804	ENSCAFG00020004307	GTPBP4	100	85.804	Canis_lupus_dingo
ENSSTOG00000023023	-	100	84.858	ENSCHIG00000018346	GTPBP4	100	84.858	Capra_hircus
ENSSTOG00000023023	-	100	86.278	ENSTSYG00000004977	GTPBP4	100	86.278	Carlito_syrichta
ENSSTOG00000023023	-	98	77.440	ENSCAPG00000002134	GTPBP4	97	77.440	Cavia_aperea
ENSSTOG00000023023	-	100	87.066	ENSCPOG00000013736	GTPBP4	100	87.066	Cavia_porcellus
ENSSTOG00000023023	-	99	85.782	ENSCCAG00000021627	-	92	86.572	Cebus_capucinus
ENSSTOG00000023023	-	100	68.530	ENSCCAG00000030115	-	100	68.530	Cebus_capucinus
ENSSTOG00000023023	-	100	87.382	ENSCATG00000004303	GTPBP4	100	87.382	Cercocebus_atys
ENSSTOG00000023023	-	100	87.539	ENSCLAG00000011323	GTPBP4	100	87.539	Chinchilla_lanigera
ENSSTOG00000023023	-	100	87.382	ENSCSAG00000014097	GTPBP4	100	87.382	Chlorocebus_sabaeus
ENSSTOG00000023023	-	96	88.410	ENSCHOG00000012602	GTPBP4	88	88.410	Choloepus_hoffmanni
ENSSTOG00000023023	-	100	78.549	ENSCPBG00000008398	GTPBP4	100	78.549	Chrysemys_picta_bellii
ENSSTOG00000023023	-	100	57.764	ENSCING00000001957	-	100	58.230	Ciona_intestinalis
ENSSTOG00000023023	-	100	57.165	ENSCSAVG00000009793	-	99	68.932	Ciona_savignyi
ENSSTOG00000023023	-	100	83.046	ENSCANG00000014168	GTPBP4	100	83.046	Colobus_angolensis_palliatus
ENSSTOG00000023023	-	100	87.697	ENSCGRG00001013765	Gtpbp4	100	87.697	Cricetulus_griseus_chok1gshd
ENSSTOG00000023023	-	100	87.697	ENSCGRG00000012171	Gtpbp4	100	87.697	Cricetulus_griseus_crigri
ENSSTOG00000023023	-	100	70.505	ENSCSEG00000007352	gtpbp4	100	70.505	Cynoglossus_semilaevis
ENSSTOG00000023023	-	100	73.502	ENSCVAG00000008993	gtpbp4	100	73.502	Cyprinodon_variegatus
ENSSTOG00000023023	-	100	74.290	ENSDARG00000018961	gtpbp4	100	74.290	Danio_rerio
ENSSTOG00000023023	-	67	88.235	ENSDNOG00000006746	GTPBP4	100	88.235	Dasypus_novemcinctus
ENSSTOG00000023023	-	82	87.500	ENSDORG00000010884	Gtpbp4	96	87.500	Dipodomys_ordii
ENSSTOG00000023023	-	96	62.749	FBgn0028473	Non1	100	52.591	Drosophila_melanogaster
ENSSTOG00000023023	-	80	84.694	ENSETEG00000016840	-	71	84.694	Echinops_telfairi
ENSSTOG00000023023	-	99	56.487	ENSEBUG00000010311	gtpbp4	99	55.854	Eptatretus_burgeri
ENSSTOG00000023023	-	100	86.909	ENSEASG00005019082	GTPBP4	100	86.909	Equus_asinus_asinus
ENSSTOG00000023023	-	100	86.909	ENSECAG00000001700	GTPBP4	100	86.909	Equus_caballus
ENSSTOG00000023023	-	100	84.367	ENSEEUG00000009889	GTPBP4	91	84.367	Erinaceus_europaeus
ENSSTOG00000023023	-	100	73.585	ENSELUG00000008578	gtpbp4	96	73.935	Esox_lucius
ENSSTOG00000023023	-	100	85.647	ENSFCAG00000026213	GTPBP4	100	85.647	Felis_catus
ENSSTOG00000023023	-	99	77.937	ENSFALG00000006971	GTPBP4	87	78.864	Ficedula_albicollis
ENSSTOG00000023023	-	100	87.697	ENSFDAG00000000998	GTPBP4	100	87.697	Fukomys_damarensis
ENSSTOG00000023023	-	100	74.132	ENSFHEG00000012922	gtpbp4	100	74.132	Fundulus_heteroclitus
ENSSTOG00000023023	-	100	73.028	ENSGMOG00000016090	gtpbp4	100	73.028	Gadus_morhua
ENSSTOG00000023023	-	98	81.432	ENSGALG00000006703	GTPBP4	100	78.864	Gallus_gallus
ENSSTOG00000023023	-	100	74.606	ENSGAFG00000002075	gtpbp4	100	74.606	Gambusia_affinis
ENSSTOG00000023023	-	100	73.975	ENSGACG00000017481	gtpbp4	100	73.975	Gasterosteus_aculeatus
ENSSTOG00000023023	-	92	79.352	ENSGAGG00000018689	GTPBP4	99	79.352	Gopherus_agassizii
ENSSTOG00000023023	-	100	86.751	ENSGGOG00000013372	GTPBP4	100	86.751	Gorilla_gorilla
ENSSTOG00000023023	-	100	74.921	ENSHBUG00000000192	gtpbp4	100	74.921	Haplochromis_burtoni
ENSSTOG00000023023	-	100	87.382	ENSHGLG00000013071	GTPBP4	100	87.382	Heterocephalus_glaber_female
ENSSTOG00000023023	-	100	87.382	ENSHGLG00100017850	GTPBP4	100	87.382	Heterocephalus_glaber_male
ENSSTOG00000023023	-	100	78.898	ENSHGLG00100002964	-	100	78.898	Heterocephalus_glaber_male
ENSSTOG00000023023	-	100	75.276	ENSHCOG00000011543	gtpbp4	100	75.276	Hippocampus_comes
ENSSTOG00000023023	-	100	74.606	ENSIPUG00000014417	GTPBP4	100	74.606	Ictalurus_punctatus
ENSSTOG00000023023	-	100	86.593	ENSJJAG00000010021	Gtpbp4	100	86.593	Jaculus_jaculus
ENSSTOG00000023023	-	100	73.028	ENSKMAG00000021705	gtpbp4	100	73.028	Kryptolebias_marmoratus
ENSSTOG00000023023	-	100	69.921	ENSLBEG00000021419	gtpbp4	99	73.935	Labrus_bergylta
ENSSTOG00000023023	-	100	75.868	ENSLACG00000001449	GTPBP4	100	75.868	Latimeria_chalumnae
ENSSTOG00000023023	-	98	79.866	ENSLOCG00000012279	gtpbp4	100	73.231	Lepisosteus_oculatus
ENSSTOG00000023023	-	100	85.804	ENSLAFG00000018578	GTPBP4	100	85.804	Loxodonta_africana
ENSSTOG00000023023	-	100	86.909	ENSMFAG00000046251	GTPBP4	100	86.909	Macaca_fascicularis
ENSSTOG00000023023	-	100	84.700	ENSMMUG00000010813	GTPBP4	100	84.700	Macaca_mulatta
ENSSTOG00000023023	-	100	87.066	ENSMNEG00000044366	GTPBP4	100	87.066	Macaca_nemestrina
ENSSTOG00000023023	-	100	86.909	ENSMLEG00000039605	GTPBP4	100	86.909	Mandrillus_leucophaeus
ENSSTOG00000023023	-	100	74.606	ENSMAMG00000013763	gtpbp4	92	74.606	Mastacembelus_armatus
ENSSTOG00000023023	-	100	75.079	ENSMZEG00005006621	gtpbp4	100	75.079	Maylandia_zebra
ENSSTOG00000023023	-	100	87.697	ENSMAUG00000000571	Gtpbp4	100	87.697	Mesocricetus_auratus
ENSSTOG00000023023	-	100	86.909	ENSMICG00000013332	GTPBP4	100	86.909	Microcebus_murinus
ENSSTOG00000023023	-	100	88.013	ENSMOCG00000002209	Gtpbp4	100	88.013	Microtus_ochrogaster
ENSSTOG00000023023	-	100	70.820	ENSMMOG00000011257	gtpbp4	100	70.820	Mola_mola
ENSSTOG00000023023	-	100	82.334	ENSMODG00000005978	GTPBP4	100	82.334	Monodelphis_domestica
ENSSTOG00000023023	-	100	73.186	ENSMALG00000012488	gtpbp4	100	73.186	Monopterus_albus
ENSSTOG00000023023	-	99	86.709	MGP_CAROLIEiJ_G0018215	Gtpbp4	100	87.500	Mus_caroli
ENSSTOG00000023023	-	100	87.539	ENSMUSG00000021149	Gtpbp4	100	87.539	Mus_musculus
ENSSTOG00000023023	-	100	87.382	MGP_PahariEiJ_G0019265	Gtpbp4	100	87.382	Mus_pahari
ENSSTOG00000023023	-	99	87.342	MGP_SPRETEiJ_G0019073	Gtpbp4	100	87.342	Mus_spretus
ENSSTOG00000023023	-	92	85.324	ENSMPUG00000016221	GTPBP4	99	85.324	Mustela_putorius_furo
ENSSTOG00000023023	-	100	85.647	ENSMLUG00000028192	GTPBP4	100	85.647	Myotis_lucifugus
ENSSTOG00000023023	-	100	86.593	ENSNGAG00000015364	Gtpbp4	100	86.593	Nannospalax_galili
ENSSTOG00000023023	-	85	78.481	ENSNBRG00000019965	gtpbp4	86	77.500	Neolamprologus_brichardi
ENSSTOG00000023023	-	100	86.751	ENSNLEG00000013495	GTPBP4	100	86.751	Nomascus_leucogenys
ENSSTOG00000023023	-	56	90.909	ENSMEUG00000016215	-	60	90.909	Notamacropus_eugenii
ENSSTOG00000023023	-	100	89.757	ENSOPRG00000008671	GTPBP4	91	89.757	Ochotona_princeps
ENSSTOG00000023023	-	100	85.962	ENSODEG00000019152	-	100	85.962	Octodon_degus
ENSSTOG00000023023	-	100	87.697	ENSODEG00000000962	-	100	87.697	Octodon_degus
ENSSTOG00000023023	-	100	75.237	ENSONIG00000017707	gtpbp4	100	75.237	Oreochromis_niloticus
ENSSTOG00000023023	-	99	81.440	ENSOANG00000006095	-	98	81.440	Ornithorhynchus_anatinus
ENSSTOG00000023023	-	100	86.278	ENSOCUG00000016120	-	100	86.278	Oryctolagus_cuniculus
ENSSTOG00000023023	-	64	80.952	ENSOCUG00000014716	-	99	80.952	Oryctolagus_cuniculus
ENSSTOG00000023023	-	100	73.186	ENSORLG00000006151	gtpbp4	100	73.186	Oryzias_latipes
ENSSTOG00000023023	-	100	73.186	ENSORLG00020020899	gtpbp4	100	73.186	Oryzias_latipes_hni
ENSSTOG00000023023	-	100	73.028	ENSORLG00015020562	gtpbp4	100	73.028	Oryzias_latipes_hsok
ENSSTOG00000023023	-	100	73.502	ENSOMEG00000019684	gtpbp4	100	73.502	Oryzias_melastigma
ENSSTOG00000023023	-	100	87.066	ENSOGAG00000011941	GTPBP4	100	87.066	Otolemur_garnettii
ENSSTOG00000023023	-	100	84.615	ENSOARG00000015047	GTPBP4	100	84.772	Ovis_aries
ENSSTOG00000023023	-	100	86.751	ENSPPAG00000042066	GTPBP4	100	86.751	Pan_paniscus
ENSSTOG00000023023	-	100	85.804	ENSPPRG00000009895	GTPBP4	100	85.804	Panthera_pardus
ENSSTOG00000023023	-	100	85.804	ENSPTIG00000008569	GTPBP4	100	85.804	Panthera_tigris_altaica
ENSSTOG00000023023	-	77	87.004	ENSPTRG00000002236	GTPBP4	87	87.417	Pan_troglodytes
ENSSTOG00000023023	-	100	87.066	ENSPANG00000023543	GTPBP4	100	87.066	Papio_anubis
ENSSTOG00000023023	-	98	79.464	ENSPKIG00000012301	gtpbp4	100	74.448	Paramormyrops_kingsleyae
ENSSTOG00000023023	-	61	81.793	ENSPSIG00000005442	GTPBP4	93	81.793	Pelodiscus_sinensis
ENSSTOG00000023023	-	100	70.820	ENSPMGG00000001462	gtpbp4	100	70.662	Periophthalmus_magnuspinnatus
ENSSTOG00000023023	-	100	87.382	ENSPEMG00000015091	-	100	87.382	Peromyscus_maniculatus_bairdii
ENSSTOG00000023023	-	100	67.000	ENSPEMG00000012279	-	100	67.000	Peromyscus_maniculatus_bairdii
ENSSTOG00000023023	-	100	68.454	ENSPMAG00000000905	gtpbp4	100	68.454	Petromyzon_marinus
ENSSTOG00000023023	-	100	82.808	ENSPCIG00000026082	GTPBP4	100	82.808	Phascolarctos_cinereus
ENSSTOG00000023023	-	100	74.448	ENSPFOG00000000026	gtpbp4	100	74.448	Poecilia_formosa
ENSSTOG00000023023	-	92	74.701	ENSPLAG00000002898	gtpbp4	97	74.701	Poecilia_latipinna
ENSSTOG00000023023	-	100	74.606	ENSPMEG00000016422	gtpbp4	100	74.606	Poecilia_mexicana
ENSSTOG00000023023	-	100	70.347	ENSPREG00000019870	gtpbp4	100	70.347	Poecilia_reticulata
ENSSTOG00000023023	-	100	86.909	ENSPPYG00000002037	GTPBP4	100	86.909	Pongo_abelii
ENSSTOG00000023023	-	56	89.333	ENSPCAG00000006152	-	50	89.333	Procavia_capensis
ENSSTOG00000023023	-	100	83.123	ENSPCOG00000014382	-	100	83.123	Propithecus_coquereli
ENSSTOG00000023023	-	97	82.895	ENSPCOG00000014602	-	100	82.895	Propithecus_coquereli
ENSSTOG00000023023	-	92	86.164	ENSPVAG00000005882	GTPBP4	86	86.164	Pteropus_vampyrus
ENSSTOG00000023023	-	100	66.562	ENSPNYG00000024251	gtpbp4	100	66.562	Pundamilia_nyererei
ENSSTOG00000023023	-	100	75.079	ENSPNAG00000019977	gtpbp4	100	75.079	Pygocentrus_nattereri
ENSSTOG00000023023	-	100	86.635	ENSRNOG00000016217	Gtpbp4	100	87.107	Rattus_norvegicus
ENSSTOG00000023023	-	100	86.593	ENSRBIG00000028875	GTPBP4	100	86.593	Rhinopithecus_bieti
ENSSTOG00000023023	-	100	86.593	ENSRROG00000030798	GTPBP4	100	86.593	Rhinopithecus_roxellana
ENSSTOG00000023023	-	99	41.860	YPL093W	-	99	41.860	Saccharomyces_cerevisiae
ENSSTOG00000023023	-	100	86.792	ENSSBOG00000028421	GTPBP4	100	86.792	Saimiri_boliviensis_boliviensis
ENSSTOG00000023023	-	99	82.803	ENSSHAG00000014713	GTPBP4	94	82.803	Sarcophilus_harrisii
ENSSTOG00000023023	-	98	80.134	ENSSFOG00015003167	gtpbp4	100	74.763	Scleropages_formosus
ENSSTOG00000023023	-	100	74.132	ENSSMAG00000005863	gtpbp4	100	74.132	Scophthalmus_maximus
ENSSTOG00000023023	-	100	74.132	ENSSDUG00000006534	gtpbp4	100	74.132	Seriola_dumerili
ENSSTOG00000023023	-	100	74.132	ENSSLDG00000020688	gtpbp4	100	74.132	Seriola_lalandi_dorsalis
ENSSTOG00000023023	-	60	92.079	ENSSARG00000003409	-	79	92.079	Sorex_araneus
ENSSTOG00000023023	-	100	78.233	ENSSPUG00000002153	GTPBP4	100	78.233	Sphenodon_punctatus
ENSSTOG00000023023	-	62	67.506	ENSSPAG00000014583	gtpbp4	100	67.506	Stegastes_partitus
ENSSTOG00000023023	-	100	82.808	ENSSSCG00000028602	GTPBP4	100	82.808	Sus_scrofa
ENSSTOG00000023023	-	97	83.447	ENSTGUG00000000820	GTPBP4	100	78.662	Taeniopygia_guttata
ENSSTOG00000023023	-	100	73.186	ENSTRUG00000003900	gtpbp4	100	73.186	Takifugu_rubripes
ENSSTOG00000023023	-	100	74.921	ENSTNIG00000007992	gtpbp4	100	74.921	Tetraodon_nigroviridis
ENSSTOG00000023023	-	100	75.828	ENSTBEG00000003613	GTPBP4	100	75.828	Tupaia_belangeri
ENSSTOG00000023023	-	100	82.013	ENSTTRG00000011163	GTPBP4	100	82.013	Tursiops_truncatus
ENSSTOG00000023023	-	100	85.804	ENSUAMG00000013191	GTPBP4	100	86.100	Ursus_americanus
ENSSTOG00000023023	-	92	86.007	ENSUMAG00000016138	GTPBP4	99	86.007	Ursus_maritimus
ENSSTOG00000023023	-	100	85.804	ENSVVUG00000008608	GTPBP4	98	85.804	Vulpes_vulpes
ENSSTOG00000023023	-	100	67.087	ENSXETG00000018097	gtpbp4	100	69.970	Xenopus_tropicalis
ENSSTOG00000023023	-	98	70.400	ENSXCOG00000019953	gtpbp4	96	70.400	Xiphophorus_couchianus
ENSSTOG00000023023	-	100	74.097	ENSXMAG00000006719	gtpbp4	100	74.097	Xiphophorus_maculatus