EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000023394 (Gene tree)
Gene ID: 101956070
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 147736 bases
Position: chrJH393311.1:9045546-9193281
Accession: 101956070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000021804	Ago_hook	PF10427.9	8.4e-19	1	1
ENSSTOP00000019098	Ago_hook	PF10427.9	3.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027394	TNRC6A-201	8462	XM_005323760	ENSSTOP00000021804	1990 (aa)	XP_005323817	I3NBQ7
ENSSTOT00000025917	TNRC6A-202	8429	XM_021725460	ENSSTOP00000019098	1979 (aa)	XP_021581135	I3N402

Gene Model

Click here to download ENSSTOG00000023394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000023394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000023394	TNRC6A	96	34.685	ENSSTOG00000008927	TNRC6B	98	35.780
ENSSTOG00000023394	TNRC6A	96	41.447	ENSSTOG00000009101	TNRC6C	99	42.472

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000023394	TNRC6A	99	96.589	ENSG00000090905	TNRC6A	99	96.589	Homo_sapiens
ENSSTOG00000023394	TNRC6A	96	95.360	ENSAMEG00000009333	TNRC6A	99	95.253	Ailuropoda_melanoleuca
ENSSTOG00000023394	TNRC6A	96	81.487	ENSAPLG00000009978	TNRC6A	100	81.487	Anas_platyrhynchos
ENSSTOG00000023394	TNRC6A	99	54.801	ENSACAG00000011857	TNRC6A	99	56.759	Anolis_carolinensis
ENSSTOG00000023394	TNRC6A	99	95.978	ENSANAG00000025252	TNRC6A	99	95.978	Aotus_nancymaae
ENSSTOG00000023394	TNRC6A	89	56.786	ENSAMXG00000019919	tnrc6a	99	56.630	Astyanax_mexicanus
ENSSTOG00000023394	TNRC6A	99	92.108	ENSBTAG00000017999	TNRC6A	99	94.035	Bos_taurus
ENSSTOG00000023394	TNRC6A	99	95.679	ENSCJAG00000020677	TNRC6A	99	95.831	Callithrix_jacchus
ENSSTOG00000023394	TNRC6A	99	95.367	ENSCAFG00000017531	TNRC6A	100	95.316	Canis_familiaris
ENSSTOG00000023394	TNRC6A	97	93.614	ENSCAFG00020021160	TNRC6A	99	94.041	Canis_lupus_dingo
ENSSTOG00000023394	TNRC6A	99	91.853	ENSCHIG00000019448	TNRC6A	99	92.072	Capra_hircus
ENSSTOG00000023394	TNRC6A	99	96.130	ENSTSYG00000012711	TNRC6A	99	96.130	Carlito_syrichta
ENSSTOG00000023394	TNRC6A	99	92.562	ENSCPOG00000036684	TNRC6A	100	92.613	Cavia_porcellus
ENSSTOG00000023394	TNRC6A	99	96.283	ENSCCAG00000033664	TNRC6A	99	96.283	Cebus_capucinus
ENSSTOG00000023394	TNRC6A	100	92.678	ENSCATG00000019284	TNRC6A	100	92.678	Cercocebus_atys
ENSSTOG00000023394	TNRC6A	100	88.141	ENSCLAG00000010217	TNRC6A	100	88.090	Chinchilla_lanigera
ENSSTOG00000023394	TNRC6A	99	96.285	ENSCSAG00000006561	TNRC6A	99	96.285	Chlorocebus_sabaeus
ENSSTOG00000023394	TNRC6A	94	91.287	ENSCHOG00000009374	TNRC6A	95	91.287	Choloepus_hoffmanni
ENSSTOG00000023394	TNRC6A	89	80.226	ENSCPBG00000001881	TNRC6A	99	80.282	Chrysemys_picta_bellii
ENSSTOG00000023394	TNRC6A	99	96.183	ENSCANG00000041549	TNRC6A	99	96.183	Colobus_angolensis_palliatus
ENSSTOG00000023394	TNRC6A	99	90.992	ENSCGRG00001015021	Tnrc6a	99	93.326	Cricetulus_griseus_chok1gshd
ENSSTOG00000023394	TNRC6A	99	90.224	ENSCGRG00000013351	Tnrc6a	99	90.122	Cricetulus_griseus_crigri
ENSSTOG00000023394	TNRC6A	89	56.377	ENSDARG00000079688	tnrc6a	99	56.814	Danio_rerio
ENSSTOG00000023394	TNRC6A	96	92.820	ENSDNOG00000013989	TNRC6A	99	92.768	Dasypus_novemcinctus
ENSSTOG00000023394	TNRC6A	96	84.559	ENSETEG00000014658	TNRC6A	99	84.559	Echinops_telfairi
ENSSTOG00000023394	TNRC6A	99	94.758	ENSEASG00005017693	TNRC6A	99	96.038	Equus_asinus_asinus
ENSSTOG00000023394	TNRC6A	99	94.758	ENSECAG00000025056	TNRC6A	99	96.038	Equus_caballus
ENSSTOG00000023394	TNRC6A	96	88.895	ENSEEUG00000004530	TNRC6A	99	88.999	Erinaceus_europaeus
ENSSTOG00000023394	TNRC6A	99	94.501	ENSFCAG00000025236	TNRC6A	99	94.501	Felis_catus
ENSSTOG00000023394	TNRC6A	99	79.001	ENSFALG00000003757	TNRC6A	99	79.899	Ficedula_albicollis
ENSSTOG00000023394	TNRC6A	89	80.147	ENSGALG00000006068	TNRC6A	99	80.598	Gallus_gallus
ENSSTOG00000023394	TNRC6A	89	79.797	ENSGAGG00000023209	TNRC6A	99	79.854	Gopherus_agassizii
ENSSTOG00000023394	TNRC6A	98	96.256	ENSGGOG00000005137	TNRC6A	99	96.256	Gorilla_gorilla
ENSSTOG00000023394	TNRC6A	98	91.271	ENSHGLG00000012474	-	100	91.169	Heterocephalus_glaber_female
ENSSTOG00000023394	TNRC6A	99	70.127	ENSHGLG00000007368	-	99	69.873	Heterocephalus_glaber_female
ENSSTOG00000023394	TNRC6A	98	90.812	ENSHGLG00100012496	-	100	90.812	Heterocephalus_glaber_male
ENSSTOG00000023394	TNRC6A	96	68.914	ENSLACG00000006277	TNRC6A	100	69.686	Latimeria_chalumnae
ENSSTOG00000023394	TNRC6A	99	83.444	ENSLOCG00000005517	tnrc6a	93	83.444	Lepisosteus_oculatus
ENSSTOG00000023394	TNRC6A	96	91.141	ENSLAFG00000004209	TNRC6A	99	91.293	Loxodonta_africana
ENSSTOG00000023394	TNRC6A	96	94.849	ENSMFAG00000003824	TNRC6A	99	94.797	Macaca_fascicularis
ENSSTOG00000023394	TNRC6A	99	96.029	ENSMMUG00000020428	TNRC6A	99	96.029	Macaca_mulatta
ENSSTOG00000023394	TNRC6A	99	95.888	ENSMNEG00000034854	TNRC6A	99	95.888	Macaca_nemestrina
ENSSTOG00000023394	TNRC6A	96	94.292	ENSMLEG00000042737	TNRC6A	97	94.136	Mandrillus_leucophaeus
ENSSTOG00000023394	TNRC6A	99	79.404	ENSMGAG00000006455	TNRC6A	99	79.909	Meleagris_gallopavo
ENSSTOG00000023394	TNRC6A	99	90.941	ENSMAUG00000012750	Tnrc6a	99	90.992	Mesocricetus_auratus
ENSSTOG00000023394	TNRC6A	100	96.030	ENSMICG00000030685	TNRC6A	100	96.030	Microcebus_murinus
ENSSTOG00000023394	TNRC6A	99	91.191	ENSMOCG00000000152	Tnrc6a	99	91.242	Microtus_ochrogaster
ENSSTOG00000023394	TNRC6A	99	80.229	ENSMODG00000016348	TNRC6A	99	81.272	Monodelphis_domestica
ENSSTOG00000023394	TNRC6A	98	89.938	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.996	Mus_caroli
ENSSTOG00000023394	TNRC6A	99	90.631	ENSMUSG00000052707	Tnrc6a	99	94.425	Mus_musculus
ENSSTOG00000023394	TNRC6A	98	90.611	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.496	Mus_pahari
ENSSTOG00000023394	TNRC6A	99	92.974	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.282	Mus_spretus
ENSSTOG00000023394	TNRC6A	96	81.689	ENSMPUG00000012324	TNRC6A	100	81.584	Mustela_putorius_furo
ENSSTOG00000023394	TNRC6A	96	92.308	ENSMLUG00000002701	TNRC6A	100	92.255	Myotis_lucifugus
ENSSTOG00000023394	TNRC6A	99	92.413	ENSNGAG00000020702	Tnrc6a	100	92.363	Nannospalax_galili
ENSSTOG00000023394	TNRC6A	96	93.510	ENSNLEG00000011851	TNRC6A	98	93.562	Nomascus_leucogenys
ENSSTOG00000023394	TNRC6A	76	88.926	ENSMEUG00000015959	-	77	88.926	Notamacropus_eugenii
ENSSTOG00000023394	TNRC6A	94	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSSTOG00000023394	TNRC6A	98	86.756	ENSODEG00000012802	TNRC6A	99	87.012	Octodon_degus
ENSSTOG00000023394	TNRC6A	86	83.615	ENSOANG00000007672	TNRC6A	99	83.676	Ornithorhynchus_anatinus
ENSSTOG00000023394	TNRC6A	96	92.207	ENSOCUG00000004325	TNRC6A	100	92.155	Oryctolagus_cuniculus
ENSSTOG00000023394	TNRC6A	98	95.795	ENSOGAG00000006666	TNRC6A	100	95.795	Otolemur_garnettii
ENSSTOG00000023394	TNRC6A	98	93.453	ENSOARG00000017950	TNRC6A	100	92.992	Ovis_aries
ENSSTOG00000023394	TNRC6A	99	96.641	ENSPPAG00000028379	TNRC6A	100	96.641	Pan_paniscus
ENSSTOG00000023394	TNRC6A	99	94.501	ENSPPRG00000005861	TNRC6A	99	94.501	Panthera_pardus
ENSSTOG00000023394	TNRC6A	99	93.683	ENSPTIG00000006346	TNRC6A	99	93.734	Panthera_tigris_altaica
ENSSTOG00000023394	TNRC6A	98	94.476	ENSPTRG00000007898	TNRC6A	99	95.990	Pan_troglodytes
ENSSTOG00000023394	TNRC6A	99	93.941	ENSPANG00000018523	TNRC6A	99	93.941	Papio_anubis
ENSSTOG00000023394	TNRC6A	77	75.862	ENSPKIG00000012859	tnrc6a	99	66.514	Paramormyrops_kingsleyae
ENSSTOG00000023394	TNRC6A	76	75.758	ENSPSIG00000003965	TNRC6A	100	75.823	Pelodiscus_sinensis
ENSSTOG00000023394	TNRC6A	99	91.442	ENSPEMG00000016318	Tnrc6a	100	91.442	Peromyscus_maniculatus_bairdii
ENSSTOG00000023394	TNRC6A	96	83.325	ENSPCIG00000012106	TNRC6A	100	83.377	Phascolarctos_cinereus
ENSSTOG00000023394	TNRC6A	99	95.670	ENSPPYG00000007202	TNRC6A	100	95.619	Pongo_abelii
ENSSTOG00000023394	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSSTOG00000023394	TNRC6A	99	94.705	ENSPCOG00000010134	TNRC6A	99	94.705	Propithecus_coquereli
ENSSTOG00000023394	TNRC6A	88	71.119	ENSPVAG00000012066	TNRC6A	99	71.005	Pteropus_vampyrus
ENSSTOG00000023394	TNRC6A	99	91.247	ENSRNOG00000024737	Tnrc6a	98	93.564	Rattus_norvegicus
ENSSTOG00000023394	TNRC6A	97	96.027	ENSRBIG00000014222	TNRC6A	100	96.027	Rhinopithecus_bieti
ENSSTOG00000023394	TNRC6A	99	95.978	ENSRROG00000032360	TNRC6A	99	95.978	Rhinopithecus_roxellana
ENSSTOG00000023394	TNRC6A	96	94.943	ENSSBOG00000036197	TNRC6A	100	96.957	Saimiri_boliviensis_boliviensis
ENSSTOG00000023394	TNRC6A	89	81.316	ENSSHAG00000008811	TNRC6A	99	82.480	Sarcophilus_harrisii
ENSSTOG00000023394	TNRC6A	86	67.515	ENSSFOG00015008920	tnrc6a	99	69.323	Scleropages_formosus
ENSSTOG00000023394	TNRC6A	71	83.333	ENSSARG00000002479	TNRC6A	89	83.696	Sorex_araneus
ENSSTOG00000023394	TNRC6A	89	79.211	ENSSPUG00000010525	TNRC6A	100	79.380	Sphenodon_punctatus
ENSSTOG00000023394	TNRC6A	99	93.395	ENSSSCG00000038870	TNRC6A	100	96.957	Sus_scrofa
ENSSTOG00000023394	TNRC6A	99	77.013	ENSTGUG00000006142	TNRC6A	100	77.671	Taeniopygia_guttata
ENSSTOG00000023394	TNRC6A	96	93.796	ENSTBEG00000014965	TNRC6A	99	93.740	Tupaia_belangeri
ENSSTOG00000023394	TNRC6A	92	98.166	ENSTTRG00000002008	TNRC6A	93	98.166	Tursiops_truncatus
ENSSTOG00000023394	TNRC6A	78	91.405	ENSUAMG00000006656	-	93	91.405	Ursus_americanus
ENSSTOG00000023394	TNRC6A	96	95.502	ENSUMAG00000008274	TNRC6A	100	95.473	Ursus_maritimus
ENSSTOG00000023394	TNRC6A	56	85.050	ENSVPAG00000010764	-	57	85.050	Vicugna_pacos
ENSSTOG00000023394	TNRC6A	100	94.573	ENSVVUG00000005380	TNRC6A	100	96.319	Vulpes_vulpes
ENSSTOG00000023394	TNRC6A	93	65.294	ENSXETG00000030437	TNRC6A	99	65.750	Xenopus_tropicalis