EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000023820 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1568 bases
Position: chrJH393299.1:2588313-2589880
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030450	zf-RNPHF	PF08080.12	2.9e-20	1	1
ENSSTOP00000030450	RRM_1	PF00076.22	5.2e-20	1	2
ENSSTOP00000030450	RRM_1	PF00076.22	5.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000023845	-	1143	-	ENSSTOP00000030450	380 (aa)	-	A0A287DA68

Gene Model

Click here to download ENSSTOG00000023820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000023820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000023820	-	99	62.169	ENSSTOG00000029028	HNRNPH2	97	61.556
ENSSTOG00000023820	-	100	76.077	ENSSTOG00000022853	-	100	76.077
ENSSTOG00000023820	-	100	84.412	ENSSTOG00000025560	-	100	84.412
ENSSTOG00000023820	-	53	62.185	ENSSTOG00000011676	HNRNPH3	93	50.613
ENSSTOG00000023820	-	99	64.096	ENSSTOG00000016376	HNRNPH1	97	63.158
ENSSTOG00000023820	-	86	37.604	ENSSTOG00000011569	GRSF1	92	37.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000023820	-	100	82.734	ENSG00000169813	HNRNPF	100	82.734	Homo_sapiens
ENSSTOG00000023820	-	100	82.974	ENSAMEG00000018983	HNRNPF	100	82.974	Ailuropoda_melanoleuca
ENSSTOG00000023820	-	100	80.096	ENSANAG00000033285	-	100	80.096	Aotus_nancymaae
ENSSTOG00000023820	-	88	72.269	ENSANAG00000033452	-	89	72.269	Aotus_nancymaae
ENSSTOG00000023820	-	100	72.616	ENSBTAG00000020513	-	100	72.616	Bos_taurus
ENSSTOG00000023820	-	100	82.494	ENSBTAG00000008853	HNRNPF	100	82.494	Bos_taurus
ENSSTOG00000023820	-	100	82.734	ENSCJAG00000008291	HNRNPF	100	82.734	Callithrix_jacchus
ENSSTOG00000023820	-	100	82.974	ENSCAFG00000007044	HNRNPF	100	82.974	Canis_familiaris
ENSSTOG00000023820	-	100	82.494	ENSCHIG00000006714	HNRNPF	100	82.494	Capra_hircus
ENSSTOG00000023820	-	97	61.071	ENSCHIG00000022971	-	99	61.071	Capra_hircus
ENSSTOG00000023820	-	100	82.254	ENSTSYG00000030439	-	100	82.254	Carlito_syrichta
ENSSTOG00000023820	-	100	71.292	ENSTSYG00000002112	-	100	71.292	Carlito_syrichta
ENSSTOG00000023820	-	100	83.933	ENSCAPG00000011521	HNRNPF	100	83.933	Cavia_aperea
ENSSTOG00000023820	-	100	83.933	ENSCPOG00000003678	HNRNPF	100	83.933	Cavia_porcellus
ENSSTOG00000023820	-	100	82.494	ENSCCAG00000031457	-	100	82.494	Cebus_capucinus
ENSSTOG00000023820	-	100	68.473	ENSCCAG00000028687	-	100	68.473	Cebus_capucinus
ENSSTOG00000023820	-	100	83.933	ENSCLAG00000005161	HNRNPF	100	83.933	Chinchilla_lanigera
ENSSTOG00000023820	-	100	81.535	ENSCANG00000003086	-	100	81.535	Colobus_angolensis_palliatus
ENSSTOG00000023820	-	93	69.189	ENSCGRG00001016206	-	88	69.189	Cricetulus_griseus_chok1gshd
ENSSTOG00000023820	-	100	83.213	ENSCGRG00001016276	Hnrnpf	100	83.213	Cricetulus_griseus_chok1gshd
ENSSTOG00000023820	-	100	78.897	ENSDNOG00000030849	-	100	78.897	Dasypus_novemcinctus
ENSSTOG00000023820	-	100	80.096	ENSDORG00000024936	-	100	80.096	Dipodomys_ordii
ENSSTOG00000023820	-	100	82.254	ENSDORG00000024298	-	100	82.254	Dipodomys_ordii
ENSSTOG00000023820	-	100	76.739	ENSDORG00000008260	-	100	76.739	Dipodomys_ordii
ENSSTOG00000023820	-	100	75.540	ENSDORG00000005431	-	100	75.540	Dipodomys_ordii
ENSSTOG00000023820	-	100	83.453	ENSEASG00005006903	HNRNPF	100	83.453	Equus_asinus_asinus
ENSSTOG00000023820	-	100	80.336	ENSECAG00000003229	HNRNPF	100	80.336	Equus_caballus
ENSSTOG00000023820	-	100	82.974	ENSFCAG00000028219	-	100	82.974	Felis_catus
ENSSTOG00000023820	-	99	75.188	ENSFDAG00000007858	-	98	75.188	Fukomys_damarensis
ENSSTOG00000023820	-	100	83.933	ENSFDAG00000011431	-	100	83.933	Fukomys_damarensis
ENSSTOG00000023820	-	100	71.324	ENSFDAG00000015308	-	99	71.324	Fukomys_damarensis
ENSSTOG00000023820	-	89	82.228	ENSGGOG00000010867	HNRNPF	93	82.228	Gorilla_gorilla
ENSSTOG00000023820	-	100	83.693	ENSHGLG00000000147	-	100	83.693	Heterocephalus_glaber_female
ENSSTOG00000023820	-	90	79.947	ENSHGLG00000014139	-	97	79.947	Heterocephalus_glaber_female
ENSSTOG00000023820	-	99	75.181	ENSHGLG00000017607	-	99	75.181	Heterocephalus_glaber_female
ENSSTOG00000023820	-	100	79.856	ENSHGLG00000010276	-	100	79.856	Heterocephalus_glaber_female
ENSSTOG00000023820	-	99	82.512	ENSHGLG00100020825	-	100	82.512	Heterocephalus_glaber_male
ENSSTOG00000023820	-	94	76.884	ENSHGLG00100019910	-	100	76.884	Heterocephalus_glaber_male
ENSSTOG00000023820	-	94	75.200	ENSHGLG00100010905	-	97	75.200	Heterocephalus_glaber_male
ENSSTOG00000023820	-	99	79.327	ENSHGLG00100019558	-	100	79.327	Heterocephalus_glaber_male
ENSSTOG00000023820	-	100	80.383	ENSHGLG00100019572	-	100	80.383	Heterocephalus_glaber_male
ENSSTOG00000023820	-	100	77.751	ENSJJAG00000017385	-	100	77.751	Jaculus_jaculus
ENSSTOG00000023820	-	100	58.115	ENSJJAG00000014424	-	100	58.115	Jaculus_jaculus
ENSSTOG00000023820	-	100	61.758	ENSJJAG00000000554	-	100	61.758	Jaculus_jaculus
ENSSTOG00000023820	-	100	82.320	ENSJJAG00000014334	-	97	82.320	Jaculus_jaculus
ENSSTOG00000023820	-	100	76.515	ENSJJAG00000022288	-	100	76.515	Jaculus_jaculus
ENSSTOG00000023820	-	100	80.622	ENSLAFG00000000424	HNRNPF	100	80.622	Loxodonta_africana
ENSSTOG00000023820	-	100	82.734	ENSMFAG00000021184	HNRNPF	100	82.734	Macaca_fascicularis
ENSSTOG00000023820	-	100	82.734	ENSMMUG00000020982	HNRNPF	100	82.734	Macaca_mulatta
ENSSTOG00000023820	-	100	82.734	ENSMLEG00000023515	HNRNPF	100	82.734	Mandrillus_leucophaeus
ENSSTOG00000023820	-	100	83.213	ENSMAUG00000007892	Hnrnpf	100	83.213	Mesocricetus_auratus
ENSSTOG00000023820	-	99	68.613	ENSMICG00000043739	-	99	68.613	Microcebus_murinus
ENSSTOG00000023820	-	99	68.095	ENSMICG00000044171	-	99	68.095	Microcebus_murinus
ENSSTOG00000023820	-	100	82.254	ENSMOCG00000014915	Hnrnpf	100	82.254	Microtus_ochrogaster
ENSSTOG00000023820	-	100	83.213	ENSMUSG00000042079	Hnrnpf	100	83.213	Mus_musculus
ENSSTOG00000023820	-	100	82.014	MGP_PahariEiJ_G0026903	-	100	82.014	Mus_pahari
ENSSTOG00000023820	-	99	82.793	ENSMPUG00000017283	HNRNPF	99	82.793	Mustela_putorius_furo
ENSSTOG00000023820	-	100	81.340	ENSMLUG00000007261	HNRNPF	100	81.340	Myotis_lucifugus
ENSSTOG00000023820	-	100	69.630	ENSNGAG00000014079	-	100	69.630	Nannospalax_galili
ENSSTOG00000023820	-	100	82.734	ENSNGAG00000010409	-	100	82.734	Nannospalax_galili
ENSSTOG00000023820	-	100	59.413	ENSNGAG00000009482	-	100	59.413	Nannospalax_galili
ENSSTOG00000023820	-	100	82.734	ENSNLEG00000019098	HNRNPF	100	82.734	Nomascus_leucogenys
ENSSTOG00000023820	-	99	79.177	ENSODEG00000002359	-	99	79.177	Octodon_degus
ENSSTOG00000023820	-	100	83.933	ENSODEG00000019266	-	100	83.933	Octodon_degus
ENSSTOG00000023820	-	100	78.657	ENSOCUG00000024604	-	100	78.657	Oryctolagus_cuniculus
ENSSTOG00000023820	-	100	83.453	ENSOCUG00000024719	-	100	83.453	Oryctolagus_cuniculus
ENSSTOG00000023820	-	99	77.458	ENSOGAG00000013734	-	99	77.458	Otolemur_garnettii
ENSSTOG00000023820	-	100	82.152	ENSOGAG00000030480	-	100	82.152	Otolemur_garnettii
ENSSTOG00000023820	-	100	70.316	ENSOARG00000016658	-	100	70.316	Ovis_aries
ENSSTOG00000023820	-	99	82.927	ENSOARG00000003995	HNRNPF	99	82.927	Ovis_aries
ENSSTOG00000023820	-	100	82.974	ENSPPRG00000021222	HNRNPF	100	82.974	Panthera_pardus
ENSSTOG00000023820	-	100	82.974	ENSPTIG00000009644	HNRNPF	100	82.974	Panthera_tigris_altaica
ENSSTOG00000023820	-	100	82.734	ENSPTRG00000002446	HNRNPF	100	82.734	Pan_troglodytes
ENSSTOG00000023820	-	100	82.494	ENSPANG00000002212	HNRNPF	100	82.494	Papio_anubis
ENSSTOG00000023820	-	100	82.734	ENSPPYG00000002212	HNRNPF	100	82.734	Pongo_abelii
ENSSTOG00000023820	-	100	79.904	ENSPCAG00000013169	HNRNPF	100	79.904	Procavia_capensis
ENSSTOG00000023820	-	100	82.014	ENSPVAG00000011646	HNRNPF	100	82.014	Pteropus_vampyrus
ENSSTOG00000023820	-	100	83.213	ENSRNOG00000014562	Hnrnpf	100	83.213	Rattus_norvegicus
ENSSTOG00000023820	-	100	82.734	ENSRROG00000001235	HNRNPF	100	82.734	Rhinopithecus_roxellana
ENSSTOG00000023820	-	100	82.734	ENSSBOG00000018361	HNRNPF	100	82.734	Saimiri_boliviensis_boliviensis
ENSSTOG00000023820	-	100	82.734	ENSSARG00000010059	HNRNPF	100	82.734	Sorex_araneus
ENSSTOG00000023820	-	100	82.254	ENSSSCG00000010203	-	100	82.254	Sus_scrofa
ENSSTOG00000023820	-	81	66.332	ENSSSCG00000024956	-	92	66.332	Sus_scrofa
ENSSTOG00000023820	-	97	61.111	ENSTBEG00000016094	HNRNPF	100	61.111	Tupaia_belangeri
ENSSTOG00000023820	-	100	82.974	ENSUAMG00000000455	HNRNPF	100	82.974	Ursus_americanus
ENSSTOG00000023820	-	100	82.974	ENSUMAG00000016485	HNRNPF	100	82.974	Ursus_maritimus
ENSSTOG00000023820	-	100	82.974	ENSVVUG00000021261	HNRNPF	100	82.974	Vulpes_vulpes