EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000024279 (Gene tree)
Gene ID: -
Gene Symbol: LARP6
Alias: FLJ11196|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 15079 bases
Position: chrJH393281.1:30370440-30385518
Accession: 24012
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000019162	La	PF05383.17	8.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000025521	LARP6-201	1386	-	ENSSTOP00000019162	461 (aa)	-	I3N466

Gene Model

Click here to download ENSSTOG00000024279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000024279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000024279	LARP6	98	95.364	ENSG00000166173	LARP6	100	93.548	Homo_sapiens
ENSSTOG00000024279	LARP6	93	58.876	ENSAPOG00000021773	larp6a	63	58.876	Acanthochromis_polyacanthus
ENSSTOG00000024279	LARP6	93	91.121	ENSAMEG00000008897	LARP6	100	91.121	Ailuropoda_melanoleuca
ENSSTOG00000024279	LARP6	93	59.326	ENSACIG00000005166	larp6a	86	58.427	Amphilophus_citrinellus
ENSSTOG00000024279	LARP6	93	58.876	ENSAOCG00000002284	larp6a	63	58.876	Amphiprion_ocellaris
ENSSTOG00000024279	LARP6	93	58.876	ENSAPEG00000008077	larp6a	84	58.876	Amphiprion_percula
ENSSTOG00000024279	LARP6	93	58.652	ENSATEG00000004018	larp6a	62	57.978	Anabas_testudineus
ENSSTOG00000024279	LARP6	91	71.631	ENSAPLG00000009914	LARP6	99	71.631	Anas_platyrhynchos
ENSSTOG00000024279	LARP6	90	67.308	ENSACAG00000008613	LARP6	98	67.308	Anolis_carolinensis
ENSSTOG00000024279	LARP6	98	95.364	ENSANAG00000024860	LARP6	94	95.445	Aotus_nancymaae
ENSSTOG00000024279	LARP6	93	59.101	ENSACLG00000018561	larp6a	61	58.202	Astatotilapia_calliptera
ENSSTOG00000024279	LARP6	91	40.367	ENSAMXG00000036816	-	93	40.534	Astyanax_mexicanus
ENSSTOG00000024279	LARP6	96	56.739	ENSAMXG00000029387	larp6a	70	56.667	Astyanax_mexicanus
ENSSTOG00000024279	LARP6	98	92.478	ENSBTAG00000003915	LARP6	94	92.408	Bos_taurus
ENSSTOG00000024279	LARP6	100	94.360	ENSCJAG00000046236	-	94	94.360	Callithrix_jacchus
ENSSTOG00000024279	LARP6	98	94.923	ENSCJAG00000018642	-	94	95.011	Callithrix_jacchus
ENSSTOG00000024279	LARP6	92	93.617	ENSCAFG00000017616	LARP6	99	93.617	Canis_familiaris
ENSSTOG00000024279	LARP6	97	93.258	ENSCAFG00020007296	LARP6	94	92.408	Canis_lupus_dingo
ENSSTOG00000024279	LARP6	98	92.699	ENSCHIG00000013742	LARP6	94	92.625	Capra_hircus
ENSSTOG00000024279	LARP6	92	92.908	ENSTSYG00000028124	LARP6	86	92.908	Carlito_syrichta
ENSSTOG00000024279	LARP6	92	91.765	ENSCAPG00000015452	LARP6	100	91.765	Cavia_aperea
ENSSTOG00000024279	LARP6	100	91.323	ENSCPOG00000022687	LARP6	93	91.323	Cavia_porcellus
ENSSTOG00000024279	LARP6	98	94.702	ENSCCAG00000036320	LARP6	94	94.794	Cebus_capucinus
ENSSTOG00000024279	LARP6	98	95.143	ENSCATG00000042432	LARP6	94	95.228	Cercocebus_atys
ENSSTOG00000024279	LARP6	99	94.079	ENSCLAG00000007893	LARP6	94	93.926	Chinchilla_lanigera
ENSSTOG00000024279	LARP6	98	95.585	ENSCSAG00000013672	LARP6	94	95.662	Chlorocebus_sabaeus
ENSSTOG00000024279	LARP6	98	92.274	ENSCHOG00000003318	LARP6	96	92.191	Choloepus_hoffmanni
ENSSTOG00000024279	LARP6	95	70.709	ENSCPBG00000010771	LARP6	84	70.709	Chrysemys_picta_bellii
ENSSTOG00000024279	LARP6	92	95.755	ENSCANG00000025833	LARP6	99	95.755	Colobus_angolensis_palliatus
ENSSTOG00000024279	LARP6	99	92.763	ENSCGRG00001024472	Larp6	94	92.191	Cricetulus_griseus_chok1gshd
ENSSTOG00000024279	LARP6	99	92.763	ENSCGRG00000004527	Larp6	94	92.191	Cricetulus_griseus_crigri
ENSSTOG00000024279	LARP6	93	59.009	ENSCSEG00000011196	larp6a	65	58.333	Cynoglossus_semilaevis
ENSSTOG00000024279	LARP6	93	58.520	ENSCVAG00000009605	larp6a	65	58.520	Cyprinodon_variegatus
ENSSTOG00000024279	LARP6	93	57.589	ENSDARG00000005355	larp6a	96	60.757	Danio_rerio
ENSSTOG00000024279	LARP6	98	92.936	ENSDNOG00000042993	LARP6	94	92.826	Dasypus_novemcinctus
ENSSTOG00000024279	LARP6	100	82.289	ENSDORG00000023910	Larp6	94	82.289	Dipodomys_ordii
ENSSTOG00000024279	LARP6	75	92.000	ENSETEG00000020390	LARP6	72	89.177	Echinops_telfairi
ENSSTOG00000024279	LARP6	98	94.889	ENSEASG00005005490	LARP6	68	94.360	Equus_asinus_asinus
ENSSTOG00000024279	LARP6	98	94.667	ENSECAG00000014190	LARP6	95	94.186	Equus_caballus
ENSSTOG00000024279	LARP6	93	58.166	ENSELUG00000007341	larp6a	64	57.718	Esox_lucius
ENSSTOG00000024279	LARP6	98	92.936	ENSFCAG00000001361	LARP6	94	92.842	Felis_catus
ENSSTOG00000024279	LARP6	94	69.545	ENSFALG00000012389	LARP6	93	69.545	Ficedula_albicollis
ENSSTOG00000024279	LARP6	95	92.273	ENSFDAG00000019994	LARP6	86	92.273	Fukomys_damarensis
ENSSTOG00000024279	LARP6	93	58.520	ENSFHEG00000010312	larp6a	63	57.848	Fundulus_heteroclitus
ENSSTOG00000024279	LARP6	95	70.975	ENSGALG00000004046	LARP6	92	69.048	Gallus_gallus
ENSSTOG00000024279	LARP6	93	58.744	ENSGAFG00000009426	larp6a	65	58.744	Gambusia_affinis
ENSSTOG00000024279	LARP6	91	59.039	ENSGACG00000014622	larp6a	97	58.124	Gasterosteus_aculeatus
ENSSTOG00000024279	LARP6	86	71.212	ENSGAGG00000010802	LARP6	61	69.305	Gopherus_agassizii
ENSSTOG00000024279	LARP6	92	95.755	ENSGGOG00000024151	LARP6	99	95.755	Gorilla_gorilla
ENSSTOG00000024279	LARP6	93	59.101	ENSHBUG00000021014	larp6a	61	58.202	Haplochromis_burtoni
ENSSTOG00000024279	LARP6	97	93.080	ENSHGLG00000015112	LARP6	94	92.225	Heterocephalus_glaber_female
ENSSTOG00000024279	LARP6	92	94.326	ENSHGLG00100013159	LARP6	99	94.326	Heterocephalus_glaber_male
ENSSTOG00000024279	LARP6	93	58.108	ENSHCOG00000001241	larp6a	84	58.333	Hippocampus_comes
ENSSTOG00000024279	LARP6	90	59.039	ENSIPUG00000010187	larp6	65	60.046	Ictalurus_punctatus
ENSSTOG00000024279	LARP6	93	37.413	ENSIPUG00000002828	-	94	37.470	Ictalurus_punctatus
ENSSTOG00000024279	LARP6	98	92.478	ENSJJAG00000011013	Larp6	95	91.323	Jaculus_jaculus
ENSSTOG00000024279	LARP6	93	59.955	ENSKMAG00000001702	larp6a	60	59.060	Kryptolebias_marmoratus
ENSSTOG00000024279	LARP6	93	56.823	ENSLBEG00000000170	larp6a	84	56.823	Labrus_bergylta
ENSSTOG00000024279	LARP6	90	41.299	ENSLACG00000002786	-	98	44.626	Latimeria_chalumnae
ENSSTOG00000024279	LARP6	94	66.667	ENSLACG00000018706	LARP6	84	66.667	Latimeria_chalumnae
ENSSTOG00000024279	LARP6	90	44.836	ENSLOCG00000008547	-	82	42.254	Lepisosteus_oculatus
ENSSTOG00000024279	LARP6	93	61.538	ENSLOCG00000014592	larp6a	65	62.217	Lepisosteus_oculatus
ENSSTOG00000024279	LARP6	97	92.825	ENSLAFG00000016343	LARP6	99	92.825	Loxodonta_africana
ENSSTOG00000024279	LARP6	98	95.556	ENSMFAG00000035507	LARP6	100	95.556	Macaca_fascicularis
ENSSTOG00000024279	LARP6	98	95.364	ENSMMUG00000004429	LARP6	96	95.445	Macaca_mulatta
ENSSTOG00000024279	LARP6	98	95.364	ENSMNEG00000045335	LARP6	94	95.445	Macaca_nemestrina
ENSSTOG00000024279	LARP6	92	95.755	ENSMLEG00000038587	LARP6	99	95.755	Mandrillus_leucophaeus
ENSSTOG00000024279	LARP6	93	58.837	ENSMAMG00000005261	larp6a	62	58.166	Mastacembelus_armatus
ENSSTOG00000024279	LARP6	93	59.101	ENSMZEG00005005774	larp6a	61	58.202	Maylandia_zebra
ENSSTOG00000024279	LARP6	91	72.038	ENSMGAG00000005077	LARP6	99	72.038	Meleagris_gallopavo
ENSSTOG00000024279	LARP6	99	92.105	ENSMAUG00000018486	Larp6	94	91.540	Mesocricetus_auratus
ENSSTOG00000024279	LARP6	96	93.468	ENSMICG00000011234	LARP6	94	92.408	Microcebus_murinus
ENSSTOG00000024279	LARP6	99	91.886	ENSMOCG00000010492	Larp6	94	91.323	Microtus_ochrogaster
ENSSTOG00000024279	LARP6	93	59.910	ENSMMOG00000016284	larp6a	85	59.009	Mola_mola
ENSSTOG00000024279	LARP6	97	77.578	ENSMODG00000009034	LARP6	91	75.427	Monodelphis_domestica
ENSSTOG00000024279	LARP6	93	58.744	ENSMALG00000014439	larp6a	84	58.259	Monopterus_albus
ENSSTOG00000024279	LARP6	99	92.763	MGP_CAROLIEiJ_G0032314	Larp6	94	92.191	Mus_caroli
ENSSTOG00000024279	LARP6	99	92.544	ENSMUSG00000034839	Larp6	94	92.191	Mus_musculus
ENSSTOG00000024279	LARP6	99	91.667	MGP_PahariEiJ_G0015180	Larp6	94	91.106	Mus_pahari
ENSSTOG00000024279	LARP6	99	92.325	MGP_SPRETEiJ_G0033452	Larp6	94	91.974	Mus_spretus
ENSSTOG00000024279	LARP6	93	92.056	ENSMPUG00000017086	LARP6	100	92.056	Mustela_putorius_furo
ENSSTOG00000024279	LARP6	98	93.584	ENSMLUG00000010319	LARP6	94	93.492	Myotis_lucifugus
ENSSTOG00000024279	LARP6	98	91.814	ENSNGAG00000014238	Larp6	94	90.889	Nannospalax_galili
ENSSTOG00000024279	LARP6	93	59.101	ENSNBRG00000008120	larp6a	84	58.389	Neolamprologus_brichardi
ENSSTOG00000024279	LARP6	99	95.395	ENSNLEG00000013691	LARP6	94	95.445	Nomascus_leucogenys
ENSSTOG00000024279	LARP6	82	79.180	ENSMEUG00000002270	LARP6	94	66.381	Notamacropus_eugenii
ENSSTOG00000024279	LARP6	76	80.057	ENSOPRG00000004868	-	99	80.057	Ochotona_princeps
ENSSTOG00000024279	LARP6	99	90.570	ENSODEG00000015958	LARP6	93	90.239	Octodon_degus
ENSSTOG00000024279	LARP6	93	59.060	ENSONIG00000002901	larp6a	84	58.166	Oreochromis_niloticus
ENSSTOG00000024279	LARP6	92	82.824	ENSOCUG00000009306	LARP6	100	82.824	Oryctolagus_cuniculus
ENSSTOG00000024279	LARP6	93	59.459	ENSORLG00000014256	larp6a	86	59.459	Oryzias_latipes
ENSSTOG00000024279	LARP6	93	59.459	ENSORLG00020019657	larp6a	63	59.459	Oryzias_latipes_hni
ENSSTOG00000024279	LARP6	93	59.459	ENSORLG00015017915	larp6a	63	59.459	Oryzias_latipes_hsok
ENSSTOG00000024279	LARP6	93	59.910	ENSOMEG00000017049	larp6a	63	59.910	Oryzias_melastigma
ENSSTOG00000024279	LARP6	97	93.080	ENSOGAG00000000522	LARP6	94	92.625	Otolemur_garnettii
ENSSTOG00000024279	LARP6	93	91.822	ENSOARG00000018750	LARP6	99	91.822	Ovis_aries
ENSSTOG00000024279	LARP6	92	95.755	ENSPPAG00000031247	LARP6	99	95.755	Pan_paniscus
ENSSTOG00000024279	LARP6	98	92.494	ENSPPRG00000011282	LARP6	94	92.408	Panthera_pardus
ENSSTOG00000024279	LARP6	92	93.160	ENSPTIG00000015318	LARP6	86	93.160	Panthera_tigris_altaica
ENSSTOG00000024279	LARP6	98	95.364	ENSPTRG00000007234	LARP6	94	95.445	Pan_troglodytes
ENSSTOG00000024279	LARP6	98	95.364	ENSPANG00000016362	LARP6	94	95.445	Papio_anubis
ENSSTOG00000024279	LARP6	98	59.267	ENSPKIG00000020103	larp6a	87	58.836	Paramormyrops_kingsleyae
ENSSTOG00000024279	LARP6	95	57.826	ENSPKIG00000004511	LARP6	67	57.826	Paramormyrops_kingsleyae
ENSSTOG00000024279	LARP6	66	81.731	ENSPSIG00000009071	LARP6	91	75.652	Pelodiscus_sinensis
ENSSTOG00000024279	LARP6	93	59.775	ENSPMGG00000006958	larp6a	86	58.876	Periophthalmus_magnuspinnatus
ENSSTOG00000024279	LARP6	100	92.408	ENSPEMG00000012909	Larp6	94	92.408	Peromyscus_maniculatus_bairdii
ENSSTOG00000024279	LARP6	97	78.475	ENSPCIG00000020765	LARP6	90	76.609	Phascolarctos_cinereus
ENSSTOG00000024279	LARP6	93	59.375	ENSPFOG00000014175	larp6a	84	59.375	Poecilia_formosa
ENSSTOG00000024279	LARP6	93	59.417	ENSPLAG00000011105	larp6a	62	59.417	Poecilia_latipinna
ENSSTOG00000024279	LARP6	93	59.193	ENSPMEG00000011085	larp6a	63	59.193	Poecilia_mexicana
ENSSTOG00000024279	LARP6	93	58.969	ENSPREG00000008067	larp6a	63	58.969	Poecilia_reticulata
ENSSTOG00000024279	LARP6	98	95.364	ENSPPYG00000006604	LARP6	94	95.445	Pongo_abelii
ENSSTOG00000024279	LARP6	69	92.814	ENSPCAG00000014197	LARP6	76	92.814	Procavia_capensis
ENSSTOG00000024279	LARP6	98	92.699	ENSPCOG00000022934	LARP6	94	92.625	Propithecus_coquereli
ENSSTOG00000024279	LARP6	98	94.222	ENSPVAG00000005618	LARP6	94	93.709	Pteropus_vampyrus
ENSSTOG00000024279	LARP6	93	59.101	ENSPNYG00000009835	larp6a	84	58.202	Pundamilia_nyererei
ENSSTOG00000024279	LARP6	93	57.271	ENSPNAG00000017966	larp6a	72	58.166	Pygocentrus_nattereri
ENSSTOG00000024279	LARP6	99	92.544	ENSRNOG00000012438	Larp6	94	91.974	Rattus_norvegicus
ENSSTOG00000024279	LARP6	100	93.290	ENSRBIG00000032902	LARP6	93	93.290	Rhinopithecus_bieti
ENSSTOG00000024279	LARP6	98	95.364	ENSRROG00000043074	LARP6	94	95.445	Rhinopithecus_roxellana
ENSSTOG00000024279	LARP6	92	95.047	ENSSBOG00000024190	LARP6	99	95.047	Saimiri_boliviensis_boliviensis
ENSSTOG00000024279	LARP6	93	76.402	ENSSHAG00000018495	LARP6	100	76.402	Sarcophilus_harrisii
ENSSTOG00000024279	LARP6	93	53.547	ENSSFOG00015002254	LARP6	83	54.691	Scleropages_formosus
ENSSTOG00000024279	LARP6	90	62.061	ENSSFOG00015023268	larp6a	82	62.295	Scleropages_formosus
ENSSTOG00000024279	LARP6	93	59.459	ENSSMAG00000009953	larp6a	62	58.784	Scophthalmus_maximus
ENSSTOG00000024279	LARP6	93	59.417	ENSSDUG00000007438	larp6a	62	58.744	Seriola_dumerili
ENSSTOG00000024279	LARP6	93	59.417	ENSSLDG00000016647	larp6a	62	58.744	Seriola_lalandi_dorsalis
ENSSTOG00000024279	LARP6	92	72.038	ENSSPUG00000011312	LARP6	99	72.038	Sphenodon_punctatus
ENSSTOG00000024279	LARP6	93	58.876	ENSSPAG00000020502	larp6a	62	58.876	Stegastes_partitus
ENSSTOG00000024279	LARP6	98	93.584	ENSSSCG00000004974	LARP6	94	93.492	Sus_scrofa
ENSSTOG00000024279	LARP6	91	70.616	ENSTGUG00000005808	LARP6	99	70.616	Taeniopygia_guttata
ENSSTOG00000024279	LARP6	97	58.120	ENSTRUG00000003151	larp6a	67	57.816	Takifugu_rubripes
ENSSTOG00000024279	LARP6	93	58.145	ENSTNIG00000011926	larp6a	88	58.145	Tetraodon_nigroviridis
ENSSTOG00000024279	LARP6	92	91.017	ENSTBEG00000015077	LARP6	99	91.017	Tupaia_belangeri
ENSSTOG00000024279	LARP6	93	89.767	ENSUAMG00000010467	LARP6	87	89.767	Ursus_americanus
ENSSTOG00000024279	LARP6	92	93.160	ENSVVUG00000015227	LARP6	96	91.762	Vulpes_vulpes
ENSSTOG00000024279	LARP6	94	68.650	ENSXETG00000020340	larp6	88	69.336	Xenopus_tropicalis
ENSSTOG00000024279	LARP6	93	58.969	ENSXCOG00000012654	larp6a	89	58.969	Xiphophorus_couchianus
ENSSTOG00000024279	LARP6	93	58.969	ENSXMAG00000021015	larp6a	60	58.969	Xiphophorus_maculatus