EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000024303 (Gene tree)
Gene ID: 101966266
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 6068 bases
Position: chrJH393282.1:3861866-3867933
Accession: 101966266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000023308	RNA_ligase	PF09414.10	6.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000029639	LIG4-201	3045	XM_005316992	ENSSTOP00000023308	911 (aa)	XP_005317049	I3NG11

Gene Model

Click here to download ENSSTOG00000024303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000024303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000024303	LIG4	100	90.450	ENSG00000174405	LIG4	100	90.450	Homo_sapiens
ENSSTOG00000024303	LIG4	99	65.376	ENSAPOG00000000866	lig4	99	65.597	Acanthochromis_polyacanthus
ENSSTOG00000024303	LIG4	100	86.937	ENSAMEG00000019685	LIG4	99	86.937	Ailuropoda_melanoleuca
ENSSTOG00000024303	LIG4	99	65.677	ENSACIG00000018309	lig4	99	65.897	Amphilophus_citrinellus
ENSSTOG00000024303	LIG4	99	65.165	ENSAOCG00000011768	lig4	99	65.385	Amphiprion_ocellaris
ENSSTOG00000024303	LIG4	99	65.275	ENSAPEG00000017815	lig4	99	65.495	Amphiprion_percula
ENSSTOG00000024303	LIG4	99	64.835	ENSATEG00000005583	lig4	99	64.945	Anabas_testudineus
ENSSTOG00000024303	LIG4	97	73.636	ENSAPLG00000001673	LIG4	99	73.636	Anas_platyrhynchos
ENSSTOG00000024303	LIG4	99	75.305	ENSACAG00000014566	LIG4	99	75.305	Anolis_carolinensis
ENSSTOG00000024303	LIG4	100	90.011	ENSANAG00000012446	LIG4	100	90.011	Aotus_nancymaae
ENSSTOG00000024303	LIG4	99	64.912	ENSACLG00000027051	lig4	99	65.237	Astatotilapia_calliptera
ENSSTOG00000024303	LIG4	99	64.770	ENSAMXG00000008192	lig4	94	64.770	Astyanax_mexicanus
ENSSTOG00000024303	LIG4	100	87.596	ENSBTAG00000015868	LIG4	100	87.596	Bos_taurus
ENSSTOG00000024303	LIG4	100	88.913	ENSCJAG00000014689	LIG4	100	88.913	Callithrix_jacchus
ENSSTOG00000024303	LIG4	100	87.706	ENSCAFG00000006031	LIG4	100	87.706	Canis_familiaris
ENSSTOG00000024303	LIG4	100	87.706	ENSCAFG00020021230	LIG4	100	87.706	Canis_lupus_dingo
ENSSTOG00000024303	LIG4	100	87.267	ENSCHIG00000001019	LIG4	100	87.267	Capra_hircus
ENSSTOG00000024303	LIG4	99	87.818	ENSCAPG00000006284	LIG4	99	87.818	Cavia_aperea
ENSSTOG00000024303	LIG4	100	87.596	ENSCPOG00000014266	LIG4	100	87.596	Cavia_porcellus
ENSSTOG00000024303	LIG4	100	89.352	ENSCCAG00000019971	LIG4	100	89.352	Cebus_capucinus
ENSSTOG00000024303	LIG4	100	89.462	ENSCATG00000021075	LIG4	100	89.462	Cercocebus_atys
ENSSTOG00000024303	LIG4	100	88.804	ENSCLAG00000003376	LIG4	100	88.804	Chinchilla_lanigera
ENSSTOG00000024303	LIG4	100	89.901	ENSCSAG00000000211	LIG4	100	89.901	Chlorocebus_sabaeus
ENSSTOG00000024303	LIG4	99	78.256	ENSCPBG00000023291	LIG4	99	77.985	Chrysemys_picta_bellii
ENSSTOG00000024303	LIG4	68	45.946	ENSCING00000009536	-	95	45.946	Ciona_intestinalis
ENSSTOG00000024303	LIG4	83	45.861	ENSCSAVG00000010336	-	98	45.861	Ciona_savignyi
ENSSTOG00000024303	LIG4	100	89.791	ENSCANG00000005805	LIG4	100	89.791	Colobus_angolensis_palliatus
ENSSTOG00000024303	LIG4	100	87.061	ENSCGRG00001012072	Lig4	100	87.061	Cricetulus_griseus_chok1gshd
ENSSTOG00000024303	LIG4	100	87.061	ENSCGRG00000013417	Lig4	100	87.061	Cricetulus_griseus_crigri
ENSSTOG00000024303	LIG4	97	65.163	ENSCSEG00000013905	lig4	96	65.163	Cynoglossus_semilaevis
ENSSTOG00000024303	LIG4	99	65.559	ENSCVAG00000007896	lig4	99	65.559	Cyprinodon_variegatus
ENSSTOG00000024303	LIG4	99	64.238	ENSDARG00000060620	lig4	99	64.238	Danio_rerio
ENSSTOG00000024303	LIG4	100	87.171	ENSDNOG00000000513	LIG4	100	87.171	Dasypus_novemcinctus
ENSSTOG00000024303	LIG4	100	87.486	ENSDORG00000027303	Lig4	100	87.486	Dipodomys_ordii
ENSSTOG00000024303	LIG4	88	31.250	FBgn0030506	Lig4	90	31.250	Drosophila_melanogaster
ENSSTOG00000024303	LIG4	99	83.370	ENSETEG00000015563	LIG4	100	83.592	Echinops_telfairi
ENSSTOG00000024303	LIG4	99	43.187	ENSEBUG00000014243	lig4	99	43.187	Eptatretus_burgeri
ENSSTOG00000024303	LIG4	100	88.804	ENSEASG00005022073	LIG4	100	88.804	Equus_asinus_asinus
ENSSTOG00000024303	LIG4	100	88.584	ENSECAG00000003257	LIG4	100	88.584	Equus_caballus
ENSSTOG00000024303	LIG4	99	66.225	ENSELUG00000006787	lig4	99	66.336	Esox_lucius
ENSSTOG00000024303	LIG4	100	87.816	ENSFCAG00000031985	LIG4	100	87.816	Felis_catus
ENSSTOG00000024303	LIG4	88	74.257	ENSFALG00000004214	LIG4	98	74.257	Ficedula_albicollis
ENSSTOG00000024303	LIG4	100	88.584	ENSFDAG00000008973	LIG4	100	88.584	Fukomys_damarensis
ENSSTOG00000024303	LIG4	99	65.559	ENSFHEG00000007398	lig4	89	65.559	Fundulus_heteroclitus
ENSSTOG00000024303	LIG4	85	64.056	ENSGMOG00000012843	lig4	99	64.056	Gadus_morhua
ENSSTOG00000024303	LIG4	99	73.673	ENSGALG00000016854	LIG4	99	73.673	Gallus_gallus
ENSSTOG00000024303	LIG4	99	65.702	ENSGAFG00000019779	lig4	95	66.113	Gambusia_affinis
ENSSTOG00000024303	LIG4	99	64.120	ENSGACG00000014135	lig4	99	64.120	Gasterosteus_aculeatus
ENSSTOG00000024303	LIG4	100	90.231	ENSGGOG00000027771	LIG4	100	90.231	Gorilla_gorilla
ENSSTOG00000024303	LIG4	99	64.693	ENSHBUG00000006245	lig4	99	65.017	Haplochromis_burtoni
ENSSTOG00000024303	LIG4	100	88.694	ENSHGLG00000000718	LIG4	100	88.694	Heterocephalus_glaber_female
ENSSTOG00000024303	LIG4	100	88.694	ENSHGLG00100003265	LIG4	100	88.694	Heterocephalus_glaber_male
ENSSTOG00000024303	LIG4	99	64.725	ENSHCOG00000012010	lig4	99	64.835	Hippocampus_comes
ENSSTOG00000024303	LIG4	99	64.301	ENSIPUG00000013748	lig4	99	64.301	Ictalurus_punctatus
ENSSTOG00000024303	LIG4	100	87.377	ENSJJAG00000006750	Lig4	100	87.377	Jaculus_jaculus
ENSSTOG00000024303	LIG4	99	65.227	ENSKMAG00000001149	lig4	99	65.227	Kryptolebias_marmoratus
ENSSTOG00000024303	LIG4	91	65.745	ENSLBEG00000014578	lig4	100	65.986	Labrus_bergylta
ENSSTOG00000024303	LIG4	99	72.235	ENSLACG00000003282	LIG4	99	72.235	Latimeria_chalumnae
ENSSTOG00000024303	LIG4	99	70.395	ENSLOCG00000008901	lig4	98	70.395	Lepisosteus_oculatus
ENSSTOG00000024303	LIG4	100	85.652	ENSLAFG00000031152	LIG4	100	85.652	Loxodonta_africana
ENSSTOG00000024303	LIG4	100	89.682	ENSMFAG00000037235	LIG4	100	89.682	Macaca_fascicularis
ENSSTOG00000024303	LIG4	100	89.682	ENSMMUG00000008874	LIG4	100	89.682	Macaca_mulatta
ENSSTOG00000024303	LIG4	100	89.682	ENSMNEG00000023575	LIG4	100	89.682	Macaca_nemestrina
ENSSTOG00000024303	LIG4	100	89.572	ENSMLEG00000026720	LIG4	100	89.572	Mandrillus_leucophaeus
ENSSTOG00000024303	LIG4	99	65.165	ENSMAMG00000008472	lig4	99	65.385	Mastacembelus_armatus
ENSSTOG00000024303	LIG4	99	64.912	ENSMZEG00005001855	lig4	99	65.237	Maylandia_zebra
ENSSTOG00000024303	LIG4	99	73.875	ENSMGAG00000015532	LIG4	99	73.875	Meleagris_gallopavo
ENSSTOG00000024303	LIG4	100	84.193	ENSMOCG00000019000	Lig4	100	84.193	Microtus_ochrogaster
ENSSTOG00000024303	LIG4	99	64.563	ENSMMOG00000004390	lig4	99	64.563	Mola_mola
ENSSTOG00000024303	LIG4	100	81.998	ENSMODG00000025064	LIG4	100	82.346	Monodelphis_domestica
ENSSTOG00000024303	LIG4	99	65.006	ENSMALG00000008555	lig4	99	65.006	Monopterus_albus
ENSSTOG00000024303	LIG4	100	86.828	MGP_CAROLIEiJ_G0030809	Lig4	100	86.828	Mus_caroli
ENSSTOG00000024303	LIG4	100	86.169	ENSMUSG00000049717	Lig4	100	86.169	Mus_musculus
ENSSTOG00000024303	LIG4	100	86.279	MGP_PahariEiJ_G0021270	Lig4	100	86.279	Mus_pahari
ENSSTOG00000024303	LIG4	100	86.169	MGP_SPRETEiJ_G0031917	Lig4	100	86.169	Mus_spretus
ENSSTOG00000024303	LIG4	100	86.828	ENSMPUG00000018675	LIG4	100	86.828	Mustela_putorius_furo
ENSSTOG00000024303	LIG4	100	87.925	ENSMLUG00000001267	LIG4	100	87.925	Myotis_lucifugus
ENSSTOG00000024303	LIG4	100	87.047	ENSNGAG00000013258	Lig4	100	87.047	Nannospalax_galili
ENSSTOG00000024303	LIG4	99	64.803	ENSNBRG00000021252	lig4	99	65.127	Neolamprologus_brichardi
ENSSTOG00000024303	LIG4	100	89.791	ENSNLEG00000007888	LIG4	100	89.791	Nomascus_leucogenys
ENSSTOG00000024303	LIG4	100	87.267	ENSOPRG00000005765	LIG4	100	87.267	Ochotona_princeps
ENSSTOG00000024303	LIG4	100	86.608	ENSODEG00000019683	LIG4	100	86.608	Octodon_degus
ENSSTOG00000024303	LIG4	99	65.017	ENSONIG00000011969	lig4	98	65.237	Oreochromis_niloticus
ENSSTOG00000024303	LIG4	100	89.352	ENSOCUG00000015734	LIG4	100	89.352	Oryctolagus_cuniculus
ENSSTOG00000024303	LIG4	99	65.132	ENSORLG00000004041	lig4	99	65.132	Oryzias_latipes
ENSSTOG00000024303	LIG4	99	65.461	ENSORLG00020019607	lig4	99	65.461	Oryzias_latipes_hni
ENSSTOG00000024303	LIG4	99	65.022	ENSORLG00015017754	lig4	99	65.022	Oryzias_latipes_hsok
ENSSTOG00000024303	LIG4	74	70.414	ENSOMEG00000003459	lig4	98	70.414	Oryzias_melastigma
ENSSTOG00000024303	LIG4	100	88.706	ENSOGAG00000032120	LIG4	99	88.706	Otolemur_garnettii
ENSSTOG00000024303	LIG4	82	88.993	ENSOARG00000005590	LIG4	98	88.993	Ovis_aries
ENSSTOG00000024303	LIG4	100	90.231	ENSPPAG00000032998	LIG4	100	90.231	Pan_paniscus
ENSSTOG00000024303	LIG4	100	87.925	ENSPPRG00000017804	LIG4	100	87.925	Panthera_pardus
ENSSTOG00000024303	LIG4	100	87.925	ENSPTIG00000010051	LIG4	100	87.925	Panthera_tigris_altaica
ENSSTOG00000024303	LIG4	100	90.340	ENSPTRG00000006025	LIG4	100	90.340	Pan_troglodytes
ENSSTOG00000024303	LIG4	100	89.572	ENSPANG00000007562	LIG4	100	89.572	Papio_anubis
ENSSTOG00000024303	LIG4	99	66.227	ENSPKIG00000011645	lig4	98	66.227	Paramormyrops_kingsleyae
ENSSTOG00000024303	LIG4	99	77.717	ENSPSIG00000001504	LIG4	99	77.717	Pelodiscus_sinensis
ENSSTOG00000024303	LIG4	99	63.556	ENSPMGG00000013486	lig4	99	63.117	Periophthalmus_magnuspinnatus
ENSSTOG00000024303	LIG4	100	86.952	ENSPEMG00000000076	Lig4	100	86.952	Peromyscus_maniculatus_bairdii
ENSSTOG00000024303	LIG4	100	82.785	ENSPCIG00000021882	LIG4	100	82.785	Phascolarctos_cinereus
ENSSTOG00000024303	LIG4	99	65.740	ENSPFOG00000000797	lig4	98	65.891	Poecilia_formosa
ENSSTOG00000024303	LIG4	99	65.628	ENSPLAG00000001196	lig4	98	65.781	Poecilia_latipinna
ENSSTOG00000024303	LIG4	99	65.740	ENSPMEG00000021353	lig4	98	66.002	Poecilia_mexicana
ENSSTOG00000024303	LIG4	99	65.295	ENSPREG00000007323	lig4	98	65.708	Poecilia_reticulata
ENSSTOG00000024303	LIG4	100	90.340	ENSPPYG00000005540	LIG4	100	90.340	Pongo_abelii
ENSSTOG00000024303	LIG4	100	88.035	ENSPVAG00000016403	LIG4	100	88.035	Pteropus_vampyrus
ENSSTOG00000024303	LIG4	99	64.803	ENSPNYG00000009660	lig4	99	65.127	Pundamilia_nyererei
ENSSTOG00000024303	LIG4	100	64.583	ENSPNAG00000028056	lig4	100	64.803	Pygocentrus_nattereri
ENSSTOG00000024303	LIG4	100	64.583	ENSPNAG00000028069	LIG4	100	64.803	Pygocentrus_nattereri
ENSSTOG00000024303	LIG4	100	85.181	ENSRNOG00000014605	Lig4	100	85.181	Rattus_norvegicus
ENSSTOG00000024303	LIG4	100	88.584	ENSRBIG00000039962	LIG4	100	88.584	Rhinopithecus_bieti
ENSSTOG00000024303	LIG4	100	89.462	ENSRROG00000006040	LIG4	100	89.462	Rhinopithecus_roxellana
ENSSTOG00000024303	LIG4	100	89.243	ENSSBOG00000019029	LIG4	100	89.243	Saimiri_boliviensis_boliviensis
ENSSTOG00000024303	LIG4	100	79.144	ENSSHAG00000009525	LIG4	100	79.605	Sarcophilus_harrisii
ENSSTOG00000024303	LIG4	99	65.532	ENSSFOG00015012835	lig4	99	65.532	Scleropages_formosus
ENSSTOG00000024303	LIG4	99	62.901	ENSSMAG00000011267	lig4	99	62.901	Scophthalmus_maximus
ENSSTOG00000024303	LIG4	99	65.385	ENSSDUG00000010343	lig4	99	65.385	Seriola_dumerili
ENSSTOG00000024303	LIG4	99	64.009	ENSSLDG00000003239	lig4	99	64.009	Seriola_lalandi_dorsalis
ENSSTOG00000024303	LIG4	100	83.042	ENSSARG00000006573	LIG4	100	83.042	Sorex_araneus
ENSSTOG00000024303	LIG4	93	76.422	ENSSPUG00000002444	LIG4	100	76.422	Sphenodon_punctatus
ENSSTOG00000024303	LIG4	99	65.227	ENSSPAG00000001609	lig4	99	65.227	Stegastes_partitus
ENSSTOG00000024303	LIG4	100	86.498	ENSSSCG00000009540	LIG4	100	86.498	Sus_scrofa
ENSSTOG00000024303	LIG4	99	73.516	ENSTGUG00000010795	LIG4	100	73.516	Taeniopygia_guttata
ENSSTOG00000024303	LIG4	99	65.670	ENSTRUG00000009984	lig4	99	65.670	Takifugu_rubripes
ENSSTOG00000024303	LIG4	99	66.334	ENSTNIG00000010348	lig4	99	66.556	Tetraodon_nigroviridis
ENSSTOG00000024303	LIG4	100	89.133	ENSTBEG00000017741	LIG4	100	89.133	Tupaia_belangeri
ENSSTOG00000024303	LIG4	100	87.816	ENSTTRG00000012660	LIG4	100	87.816	Tursiops_truncatus
ENSSTOG00000024303	LIG4	100	87.267	ENSUAMG00000003773	LIG4	100	87.267	Ursus_americanus
ENSSTOG00000024303	LIG4	99	70.989	ENSXETG00000002654	lig4	99	70.989	Xenopus_tropicalis
ENSSTOG00000024303	LIG4	99	65.517	ENSXCOG00000017401	lig4	98	65.449	Xiphophorus_couchianus
ENSSTOG00000024303	LIG4	99	65.889	ENSXMAG00000015142	lig4	98	65.819	Xiphophorus_maculatus