EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000024353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 29510 bases
Position: chrJH393312.1:3904473-3933982
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000031270	KH_1	PF00013.29	6.9e-07	1	1
ENSSTOP00000025922	KH_1	PF00013.29	1e-06	1	1
ENSSTOP00000031270	zf-CCHC	PF00098.23	9.2e-05	1	1
ENSSTOP00000025922	zf-CCHC	PF00098.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041345	-	327	-	ENSSTOP00000032082	108 (aa)	-	A0A287DEW0
ENSSTOT00000023913	-	1515	-	ENSSTOP00000031270	504 (aa)	-	A0A287DCH6
ENSSTOT00000037395	-	1842	-	ENSSTOP00000025922	613 (aa)	-	A0A287CX92

Gene Model

Click here to download ENSSTOG00000024353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000024353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000024353	-	83	96.667	ENSSTOG00000009790	-	74	96.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000024353	-	68	70.543	ENSAPOG00000012341	sf1	55	70.909	Acanthochromis_polyacanthus
ENSSTOG00000024353	-	83	96.667	ENSAMEG00000017828	SF1	72	96.667	Ailuropoda_melanoleuca
ENSSTOG00000024353	-	66	74.521	ENSACIG00000016514	sf1	55	73.003	Amphilophus_citrinellus
ENSSTOG00000024353	-	68	70.801	ENSAOCG00000010934	sf1	55	70.130	Amphiprion_ocellaris
ENSSTOG00000024353	-	68	70.801	ENSAPEG00000009498	sf1	55	70.130	Amphiprion_percula
ENSSTOG00000024353	-	66	72.032	ENSATEG00000001894	sf1	54	71.618	Anabas_testudineus
ENSSTOG00000024353	-	98	85.587	ENSANAG00000026664	-	98	85.587	Aotus_nancymaae
ENSSTOG00000024353	-	75	81.418	ENSANAG00000022607	-	88	83.191	Aotus_nancymaae
ENSSTOG00000024353	-	66	74.255	ENSACLG00000007633	sf1	56	72.118	Astatotilapia_calliptera
ENSSTOG00000024353	-	68	74.479	ENSAMXG00000003630	sf1	56	72.196	Astyanax_mexicanus
ENSSTOG00000024353	-	77	87.788	ENSBTAG00000001035	SF1	76	86.214	Bos_taurus
ENSSTOG00000024353	-	83	96.667	ENSCJAG00000002780	SF1	73	96.667	Callithrix_jacchus
ENSSTOG00000024353	-	83	96.667	ENSCAFG00000014239	SF1	73	96.667	Canis_familiaris
ENSSTOG00000024353	-	83	96.667	ENSCAFG00020014381	SF1	73	96.667	Canis_lupus_dingo
ENSSTOG00000024353	-	77	89.168	ENSCHIG00000025867	SF1	94	89.168	Capra_hircus
ENSSTOG00000024353	-	54	92.308	ENSTSYG00000033618	SF1	82	85.305	Carlito_syrichta
ENSSTOG00000024353	-	98	82.888	ENSCAPG00000010762	SF1	100	81.996	Cavia_aperea
ENSSTOG00000024353	-	83	96.667	ENSCPOG00000012290	SF1	96	88.760	Cavia_porcellus
ENSSTOG00000024353	-	72	75.000	ENSCCAG00000023781	-	88	74.558	Cebus_capucinus
ENSSTOG00000024353	-	83	96.667	ENSCCAG00000037881	SF1	88	89.544	Cebus_capucinus
ENSSTOG00000024353	-	83	96.667	ENSCATG00000011564	SF1	90	93.973	Cercocebus_atys
ENSSTOG00000024353	-	77	89.168	ENSCSAG00000007258	SF1	94	89.168	Chlorocebus_sabaeus
ENSSTOG00000024353	-	74	87.229	ENSCHOG00000006008	SF1	79	87.560	Choloepus_hoffmanni
ENSSTOG00000024353	-	76	76.147	ENSCPBG00000023763	SF1	59	78.431	Chrysemys_picta_bellii
ENSSTOG00000024353	-	54	56.550	ENSCING00000005564	-	72	52.500	Ciona_intestinalis
ENSSTOG00000024353	-	73	50.966	ENSCSAVG00000009055	-	71	61.356	Ciona_savignyi
ENSSTOG00000024353	-	83	96.667	ENSCANG00000042201	SF1	88	89.431	Colobus_angolensis_palliatus
ENSSTOG00000024353	-	98	82.562	ENSCGRG00001003677	Sf1	98	82.028	Cricetulus_griseus_chok1gshd
ENSSTOG00000024353	-	98	82.531	ENSCGRG00000001708	Sf1	95	88.566	Cricetulus_griseus_crigri
ENSSTOG00000024353	-	69	71.026	ENSCSEG00000014375	sf1	54	69.792	Cynoglossus_semilaevis
ENSSTOG00000024353	-	68	72.539	ENSCVAG00000001670	sf1	67	70.047	Cyprinodon_variegatus
ENSSTOG00000024353	-	69	72.539	ENSDARG00000008188	sf1	74	71.495	Danio_rerio
ENSSTOG00000024353	-	77	88.588	ENSDNOG00000001282	SF1	94	88.588	Dasypus_novemcinctus
ENSSTOG00000024353	-	84	96.667	ENSDORG00000016334	Sf1	73	96.667	Dipodomys_ordii
ENSSTOG00000024353	-	72	75.921	ENSETEG00000012830	SF1	64	75.219	Echinops_telfairi
ENSSTOG00000024353	-	77	88.781	ENSEASG00005018272	SF1	94	88.781	Equus_asinus_asinus
ENSSTOG00000024353	-	77	88.975	ENSECAG00000024544	SF1	94	88.975	Equus_caballus
ENSSTOG00000024353	-	69	93.889	ENSEEUG00000001058	SF1	92	94.215	Erinaceus_europaeus
ENSSTOG00000024353	-	83	96.667	ENSFCAG00000012231	SF1	73	96.667	Felis_catus
ENSSTOG00000024353	-	98	83.601	ENSFDAG00000009833	SF1	100	82.709	Fukomys_damarensis
ENSSTOG00000024353	-	68	70.801	ENSFHEG00000022656	sf1	64	68.254	Fundulus_heteroclitus
ENSSTOG00000024353	-	56	76.923	ENSGMOG00000007469	sf1	59	76.923	Gadus_morhua
ENSSTOG00000024353	-	67	73.475	ENSGAFG00000019284	sf1	81	71.262	Gambusia_affinis
ENSSTOG00000024353	-	68	70.649	ENSGACG00000000826	sf1	63	70.822	Gasterosteus_aculeatus
ENSSTOG00000024353	-	76	75.917	ENSGAGG00000021691	SF1	64	78.431	Gopherus_agassizii
ENSSTOG00000024353	-	67	73.158	ENSHBUG00000011598	sf1	55	70.649	Haplochromis_burtoni
ENSSTOG00000024353	-	98	83.452	ENSHGLG00000009541	SF1	98	82.562	Heterocephalus_glaber_female
ENSSTOG00000024353	-	70	69.825	ENSHGLG00100008076	-	100	62.330	Heterocephalus_glaber_male
ENSSTOG00000024353	-	75	75.682	ENSHGLG00100008255	-	96	71.257	Heterocephalus_glaber_male
ENSSTOG00000024353	-	98	83.422	ENSHGLG00100013879	-	100	82.531	Heterocephalus_glaber_male
ENSSTOG00000024353	-	68	71.244	ENSHCOG00000011388	sf1	54	70.430	Hippocampus_comes
ENSSTOG00000024353	-	83	96.667	ENSJJAG00000011788	Sf1	73	96.667	Jaculus_jaculus
ENSSTOG00000024353	-	69	72.634	ENSKMAG00000005854	sf1	66	69.074	Kryptolebias_marmoratus
ENSSTOG00000024353	-	67	72.513	ENSLBEG00000019836	sf1	59	71.504	Labrus_bergylta
ENSSTOG00000024353	-	72	75.426	ENSLACG00000018493	SF1	78	74.478	Latimeria_chalumnae
ENSSTOG00000024353	-	67	74.271	ENSLOCG00000002130	sf1	66	72.350	Lepisosteus_oculatus
ENSSTOG00000024353	-	83	96.667	ENSLAFG00000007201	SF1	72	96.667	Loxodonta_africana
ENSSTOG00000024353	-	83	96.667	ENSMFAG00000033122	SF1	89	93.973	Macaca_fascicularis
ENSSTOG00000024353	-	83	96.667	ENSMMUG00000022606	SF1	99	87.192	Macaca_mulatta
ENSSTOG00000024353	-	83	96.667	ENSMNEG00000037901	SF1	89	93.973	Macaca_nemestrina
ENSSTOG00000024353	-	85	96.667	ENSMLEG00000040706	SF1	89	93.973	Mandrillus_leucophaeus
ENSSTOG00000024353	-	68	72.093	ENSMAMG00000001780	sf1	55	70.649	Mastacembelus_armatus
ENSSTOG00000024353	-	67	72.895	ENSMZEG00005009196	sf1	55	70.390	Maylandia_zebra
ENSSTOG00000024353	-	98	82.562	ENSMAUG00000014064	Sf1	98	81.673	Mesocricetus_auratus
ENSSTOG00000024353	-	83	96.667	ENSMICG00000001202	SF1	91	89.637	Microcebus_murinus
ENSSTOG00000024353	-	98	82.384	ENSMOCG00000022038	Sf1	98	81.851	Microtus_ochrogaster
ENSSTOG00000024353	-	66	72.703	ENSMMOG00000020474	sf1	55	70.811	Mola_mola
ENSSTOG00000024353	-	72	85.330	ENSMODG00000029407	SF1	81	88.204	Monodelphis_domestica
ENSSTOG00000024353	-	66	74.185	ENSMALG00000020521	sf1	62	72.678	Monopterus_albus
ENSSTOG00000024353	-	98	82.740	MGP_CAROLIEiJ_G0022607	Sf1	100	85.393	Mus_caroli
ENSSTOG00000024353	-	98	82.740	ENSMUSG00000024949	Sf1	100	85.393	Mus_musculus
ENSSTOG00000024353	-	98	82.740	MGP_PahariEiJ_G0014101	Sf1	100	85.393	Mus_pahari
ENSSTOG00000024353	-	98	82.740	MGP_SPRETEiJ_G0023518	Sf1	100	85.393	Mus_spretus
ENSSTOG00000024353	-	77	87.558	ENSMPUG00000012684	SF1	72	85.996	Mustela_putorius_furo
ENSSTOG00000024353	-	77	87.558	ENSMLUG00000015217	-	72	85.996	Myotis_lucifugus
ENSSTOG00000024353	-	77	82.488	ENSMLUG00000029800	-	76	82.207	Myotis_lucifugus
ENSSTOG00000024353	-	98	85.053	ENSNGAG00000005550	Sf1	98	85.053	Nannospalax_galili
ENSSTOG00000024353	-	66	74.255	ENSNBRG00000017606	sf1	55	72.118	Neolamprologus_brichardi
ENSSTOG00000024353	-	83	96.667	ENSNLEG00000005236	-	88	89.431	Nomascus_leucogenys
ENSSTOG00000024353	-	76	88.039	ENSMEUG00000013424	SF1	96	88.039	Notamacropus_eugenii
ENSSTOG00000024353	-	71	94.582	ENSOPRG00000005008	SF1	89	94.582	Ochotona_princeps
ENSSTOG00000024353	-	78	93.333	ENSODEG00000006102	-	74	93.333	Octodon_degus
ENSSTOG00000024353	-	67	73.158	ENSONIG00000015728	sf1	55	70.649	Oreochromis_niloticus
ENSSTOG00000024353	-	67	83.333	ENSOANG00000002909	SF1	95	84.697	Ornithorhynchus_anatinus
ENSSTOG00000024353	-	83	96.667	ENSOCUG00000026486	SF1	74	96.667	Oryctolagus_cuniculus
ENSSTOG00000024353	-	70	70.707	ENSORLG00000011853	sf1	64	67.568	Oryzias_latipes
ENSSTOG00000024353	-	71	70.426	ENSORLG00020011834	sf1	64	67.338	Oryzias_latipes_hni
ENSSTOG00000024353	-	68	70.284	ENSORLG00015012855	sf1	64	66.890	Oryzias_latipes_hsok
ENSSTOG00000024353	-	69	71.282	ENSOMEG00000005210	sf1	56	71.094	Oryzias_melastigma
ENSSTOG00000024353	-	83	96.667	ENSOGAG00000016196	SF1	73	96.667	Otolemur_garnettii
ENSSTOG00000024353	-	77	87.788	ENSOARG00000009166	SF1	95	84.871	Ovis_aries
ENSSTOG00000024353	-	83	96.667	ENSPPAG00000002799	-	90	89.431	Pan_paniscus
ENSSTOG00000024353	-	83	96.667	ENSPPRG00000013566	SF1	73	96.667	Panthera_pardus
ENSSTOG00000024353	-	98	78.871	ENSPTIG00000016141	SF1	98	78.142	Panthera_tigris_altaica
ENSSTOG00000024353	-	83	96.667	ENSPTRG00000003846	SF1	97	87.981	Pan_troglodytes
ENSSTOG00000024353	-	83	96.667	ENSPANG00000020754	SF1	90	93.973	Papio_anubis
ENSSTOG00000024353	-	65	76.347	ENSPKIG00000012116	sf1	76	79.125	Paramormyrops_kingsleyae
ENSSTOG00000024353	-	61	80.428	ENSPSIG00000003610	SF1	69	83.714	Pelodiscus_sinensis
ENSSTOG00000024353	-	98	82.918	ENSPEMG00000010463	Sf1	98	82.028	Peromyscus_maniculatus_bairdii
ENSSTOG00000024353	-	60	61.607	ENSPMAG00000008272	sf1	53	57.453	Petromyzon_marinus
ENSSTOG00000024353	-	78	96.774	ENSPCIG00000018173	SF1	73	96.774	Phascolarctos_cinereus
ENSSTOG00000024353	-	66	75.339	ENSPFOG00000013683	sf1	70	71.765	Poecilia_formosa
ENSSTOG00000024353	-	67	73.368	ENSPLAG00000018076	sf1	65	70.159	Poecilia_latipinna
ENSSTOG00000024353	-	67	73.368	ENSPMEG00000005726	sf1	66	70.159	Poecilia_mexicana
ENSSTOG00000024353	-	67	72.846	ENSPREG00000004155	sf1	63	69.476	Poecilia_reticulata
ENSSTOG00000024353	-	83	93.333	ENSPPYG00000003098	-	98	89.168	Pongo_abelii
ENSSTOG00000024353	-	78	87.786	ENSPCAG00000013631	SF1	78	87.786	Procavia_capensis
ENSSTOG00000024353	-	83	96.667	ENSPCOG00000027546	SF1	91	89.637	Propithecus_coquereli
ENSSTOG00000024353	-	78	87.595	ENSPVAG00000016938	SF1	79	87.595	Pteropus_vampyrus
ENSSTOG00000024353	-	68	71.907	ENSPNYG00000004673	sf1	55	70.390	Pundamilia_nyererei
ENSSTOG00000024353	-	68	74.803	ENSPNAG00000013072	sf1	64	70.159	Pygocentrus_nattereri
ENSSTOG00000024353	-	71	94.357	ENSRNOG00000021085	Sf1	88	94.357	Rattus_norvegicus
ENSSTOG00000024353	-	98	76.964	ENSRBIG00000042818	SF1	89	89.247	Rhinopithecus_bieti
ENSSTOG00000024353	-	98	83.630	ENSRROG00000045655	SF1	96	88.822	Rhinopithecus_roxellana
ENSSTOG00000024353	-	93	71.012	ENSSBOG00000022267	-	88	80.679	Saimiri_boliviensis_boliviensis
ENSSTOG00000024353	-	67	83.200	ENSSHAG00000006841	SF1	68	84.533	Sarcophilus_harrisii
ENSSTOG00000024353	-	73	70.270	ENSSFOG00015021978	sf1	53	72.581	Scleropages_formosus
ENSSTOG00000024353	-	72	67.773	ENSSMAG00000007549	sf1	57	70.449	Scophthalmus_maximus
ENSSTOG00000024353	-	67	70.681	ENSSDUG00000003903	sf1	56	71.053	Seriola_dumerili
ENSSTOG00000024353	-	67	70.681	ENSSLDG00000013075	sf1	55	71.053	Seriola_lalandi_dorsalis
ENSSTOG00000024353	-	77	82.364	ENSSARG00000008180	SF1	99	82.946	Sorex_araneus
ENSSTOG00000024353	-	72	75.701	ENSSPUG00000012907	SF1	76	73.970	Sphenodon_punctatus
ENSSTOG00000024353	-	68	70.543	ENSSPAG00000019060	sf1	55	70.130	Stegastes_partitus
ENSSTOG00000024353	-	83	96.667	ENSSSCG00000013021	SF1	94	88.975	Sus_scrofa
ENSSTOG00000024353	-	77	56.154	ENSTNIG00000004820	sf1	72	63.492	Tetraodon_nigroviridis
ENSSTOG00000024353	-	82	77.293	ENSTBEG00000013133	SF1	67	81.223	Tupaia_belangeri
ENSSTOG00000024353	-	77	83.463	ENSTTRG00000008857	SF1	85	81.938	Tursiops_truncatus
ENSSTOG00000024353	-	58	90.099	ENSUAMG00000011977	SF1	67	86.932	Ursus_americanus
ENSSTOG00000024353	-	99	77.658	ENSUMAG00000007268	SF1	99	75.856	Ursus_maritimus
ENSSTOG00000024353	-	59	84.462	ENSVPAG00000011912	SF1	66	87.736	Vicugna_pacos
ENSSTOG00000024353	-	77	89.168	ENSVVUG00000028585	SF1	94	89.168	Vulpes_vulpes
ENSSTOG00000024353	-	77	71.897	ENSXETG00000008434	sf1	58	81.818	Xenopus_tropicalis
ENSSTOG00000024353	-	66	75.068	ENSXCOG00000003704	sf1	79	71.905	Xiphophorus_couchianus
ENSSTOG00000024353	-	68	72.917	ENSXMAG00000007822	sf1	66	70.159	Xiphophorus_maculatus