EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000024593 (Gene tree)
Gene ID: 101958116
Gene Symbol: PNKD
Alias: BRP17|DKFZp564N1362|DYT8|FKSG19|FPD1|KIAA1184|KIPP1184|MGC31943|MR-1|MR-1S|PDC|PKND1|TAHCCP2
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 65775 bases
Position: chrJH393379.1:799926-865700
Accession: 101958116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000031885	Lactamase_B	PF00753.27	1.2e-10	1	1
ENSSTOP00000025765	Lactamase_B	PF00753.27	1.6e-10	1	1
ENSSTOP00000016588	Lactamase_B	PF00753.27	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000029083	PNKD-202	1275	-	ENSSTOP00000016588	424 (aa)	-	I3MWU3
ENSSTOT00000036352	PNKD-201	3332	XM_021729928	ENSSTOP00000025765	385 (aa)	XP_021585603	A0A287CWR4
ENSSTOT00000040537	PNKD-203	3248	XM_005330462	ENSSTOP00000031885	360 (aa)	XP_005330519	A0A287DE94

Gene Model

Click here to download ENSSTOG00000024593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000024593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000024593	PNKD	70	40.892	ENSSTOG00000009109	HAGH	91	43.697
ENSSTOG00000024593	PNKD	66	43.277	ENSSTOG00000004187	HAGHL	81	44.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000024593	PNKD	100	96.883	ENSG00000127838	PNKD	100	96.883	Homo_sapiens
ENSSTOG00000024593	PNKD	90	61.231	ENSAPOG00000019072	pnkd	99	56.583	Acanthochromis_polyacanthus
ENSSTOG00000024593	PNKD	100	95.844	ENSAMEG00000003089	PNKD	100	95.844	Ailuropoda_melanoleuca
ENSSTOG00000024593	PNKD	97	54.301	ENSACIG00000015359	pnkd	96	54.301	Amphilophus_citrinellus
ENSSTOG00000024593	PNKD	90	60.923	ENSAOCG00000011458	-	91	60.923	Amphiprion_ocellaris
ENSSTOG00000024593	PNKD	85	58.497	ENSAOCG00000024159	pnkd	97	53.846	Amphiprion_ocellaris
ENSSTOG00000024593	PNKD	90	60.923	ENSAPEG00000011710	pnkd	99	56.303	Amphiprion_percula
ENSSTOG00000024593	PNKD	90	60.615	ENSATEG00000002727	pnkd	92	60.615	Anabas_testudineus
ENSSTOG00000024593	PNKD	89	63.438	ENSACAG00000001617	PNKD	99	56.522	Anolis_carolinensis
ENSSTOG00000024593	PNKD	100	96.883	ENSANAG00000019661	PNKD	100	96.883	Aotus_nancymaae
ENSSTOG00000024593	PNKD	90	61.846	ENSACLG00000021665	pnkd	91	61.846	Astatotilapia_calliptera
ENSSTOG00000024593	PNKD	93	61.424	ENSAMXG00000043305	pnkd	90	62.577	Astyanax_mexicanus
ENSSTOG00000024593	PNKD	100	91.944	ENSBTAG00000003936	PNKD	100	91.944	Bos_taurus
ENSSTOG00000024593	PNKD	100	96.883	ENSCJAG00000010820	PNKD	100	96.883	Callithrix_jacchus
ENSSTOG00000024593	PNKD	100	93.766	ENSCAFG00000014632	PNKD	100	93.766	Canis_familiaris
ENSSTOG00000024593	PNKD	100	91.944	ENSCAFG00020027093	PNKD	100	91.944	Canis_lupus_dingo
ENSSTOG00000024593	PNKD	100	95.325	ENSCHIG00000002862	PNKD	100	95.325	Capra_hircus
ENSSTOG00000024593	PNKD	100	96.623	ENSTSYG00000034863	PNKD	100	96.623	Carlito_syrichta
ENSSTOG00000024593	PNKD	100	96.462	ENSCPOG00000020589	PNKD	100	96.462	Cavia_porcellus
ENSSTOG00000024593	PNKD	100	96.623	ENSCCAG00000036713	PNKD	100	96.623	Cebus_capucinus
ENSSTOG00000024593	PNKD	100	97.143	ENSCATG00000041188	PNKD	100	97.143	Cercocebus_atys
ENSSTOG00000024593	PNKD	100	97.403	ENSCLAG00000012048	PNKD	100	97.403	Chinchilla_lanigera
ENSSTOG00000024593	PNKD	100	97.143	ENSCSAG00000008892	PNKD	100	97.143	Chlorocebus_sabaeus
ENSSTOG00000024593	PNKD	100	97.143	ENSCANG00000032283	PNKD	100	97.143	Colobus_angolensis_palliatus
ENSSTOG00000024593	PNKD	100	97.403	ENSCGRG00001024071	Pnkd	100	97.403	Cricetulus_griseus_chok1gshd
ENSSTOG00000024593	PNKD	99	95.487	ENSCGRG00000005443	Pnkd	100	95.487	Cricetulus_griseus_crigri
ENSSTOG00000024593	PNKD	97	55.182	ENSCSEG00000013958	pnkd	99	54.062	Cynoglossus_semilaevis
ENSSTOG00000024593	PNKD	89	62.069	ENSCVAG00000005723	pnkd	99	56.583	Cyprinodon_variegatus
ENSSTOG00000024593	PNKD	89	61.562	ENSDARG00000071032	pnkd	89	61.562	Danio_rerio
ENSSTOG00000024593	PNKD	100	91.111	ENSDNOG00000046154	PNKD	89	91.111	Dasypus_novemcinctus
ENSSTOG00000024593	PNKD	100	97.418	ENSDORG00000016109	Pnkd	100	97.418	Dipodomys_ordii
ENSSTOG00000024593	PNKD	100	65.553	ENSETEG00000014587	PNKD	100	65.553	Echinops_telfairi
ENSSTOG00000024593	PNKD	85	54.575	ENSEBUG00000013857	pnkd	98	54.440	Eptatretus_burgeri
ENSSTOG00000024593	PNKD	100	91.944	ENSEASG00005012391	PNKD	100	91.944	Equus_asinus_asinus
ENSSTOG00000024593	PNKD	100	95.065	ENSECAG00000013322	PNKD	100	95.065	Equus_caballus
ENSSTOG00000024593	PNKD	96	57.391	ENSELUG00000015007	pnkd	91	56.571	Esox_lucius
ENSSTOG00000024593	PNKD	100	92.500	ENSFCAG00000002373	PNKD	100	92.500	Felis_catus
ENSSTOG00000024593	PNKD	86	63.430	ENSFALG00000004028	PNKD	97	62.080	Ficedula_albicollis
ENSSTOG00000024593	PNKD	100	97.143	ENSFDAG00000012326	PNKD	100	97.143	Fukomys_damarensis
ENSSTOG00000024593	PNKD	90	61.538	ENSFHEG00000010999	pnkd	87	61.538	Fundulus_heteroclitus
ENSSTOG00000024593	PNKD	100	55.978	ENSGMOG00000009565	pnkd	96	56.977	Gadus_morhua
ENSSTOG00000024593	PNKD	85	63.399	ENSGALG00000022166	PNKD	99	62.581	Gallus_gallus
ENSSTOG00000024593	PNKD	89	62.382	ENSGAFG00000013942	pnkd	80	62.382	Gambusia_affinis
ENSSTOG00000024593	PNKD	94	60.355	ENSGACG00000007119	pnkd	89	62.617	Gasterosteus_aculeatus
ENSSTOG00000024593	PNKD	87	63.141	ENSGAGG00000017234	PNKD	100	62.264	Gopherus_agassizii
ENSSTOG00000024593	PNKD	100	96.883	ENSGGOG00000006892	PNKD	100	96.883	Gorilla_gorilla
ENSSTOG00000024593	PNKD	90	61.846	ENSHBUG00000001234	pnkd	91	61.846	Haplochromis_burtoni
ENSSTOG00000024593	PNKD	100	96.623	ENSHGLG00000013971	PNKD	100	96.623	Heterocephalus_glaber_female
ENSSTOG00000024593	PNKD	100	96.623	ENSHGLG00100005225	PNKD	100	96.623	Heterocephalus_glaber_male
ENSSTOG00000024593	PNKD	89	62.187	ENSHCOG00000018894	pnkd	89	62.187	Hippocampus_comes
ENSSTOG00000024593	PNKD	100	59.780	ENSIPUG00000013907	pnkd	99	64.495	Ictalurus_punctatus
ENSSTOG00000024593	PNKD	100	96.364	ENSJJAG00000023559	Pnkd	100	96.364	Jaculus_jaculus
ENSSTOG00000024593	PNKD	89	61.442	ENSKMAG00000014879	pnkd	89	61.442	Kryptolebias_marmoratus
ENSSTOG00000024593	PNKD	89	61.755	ENSLBEG00000000985	pnkd	88	62.145	Labrus_bergylta
ENSSTOG00000024593	PNKD	100	56.944	ENSLOCG00000000821	pnkd	89	62.069	Lepisosteus_oculatus
ENSSTOG00000024593	PNKD	100	94.104	ENSLAFG00000007427	PNKD	100	94.104	Loxodonta_africana
ENSSTOG00000024593	PNKD	100	97.143	ENSMFAG00000038281	PNKD	100	97.143	Macaca_fascicularis
ENSSTOG00000024593	PNKD	50	99.448	ENSMMUG00000022819	-	100	99.448	Macaca_mulatta
ENSSTOG00000024593	PNKD	100	93.906	ENSMNEG00000041541	PNKD	100	97.452	Macaca_nemestrina
ENSSTOG00000024593	PNKD	100	97.143	ENSMLEG00000042812	PNKD	100	97.143	Mandrillus_leucophaeus
ENSSTOG00000024593	PNKD	89	61.755	ENSMAMG00000017212	pnkd	99	56.583	Mastacembelus_armatus
ENSSTOG00000024593	PNKD	82	62.712	ENSMZEG00005012514	pnkd	100	62.712	Maylandia_zebra
ENSSTOG00000024593	PNKD	50	51.818	ENSMGAG00000011524	PNKD	100	56.696	Meleagris_gallopavo
ENSSTOG00000024593	PNKD	100	93.889	ENSMAUG00000013099	Pnkd	100	93.889	Mesocricetus_auratus
ENSSTOG00000024593	PNKD	100	97.143	ENSMICG00000042547	PNKD	100	97.143	Microcebus_murinus
ENSSTOG00000024593	PNKD	100	97.668	ENSMOCG00000007956	Pnkd	100	97.668	Microtus_ochrogaster
ENSSTOG00000024593	PNKD	86	62.460	ENSMMOG00000005679	pnkd	99	58.501	Mola_mola
ENSSTOG00000024593	PNKD	86	80.386	ENSMODG00000015497	PNKD	97	73.699	Monodelphis_domestica
ENSSTOG00000024593	PNKD	88	62.893	ENSMALG00000005967	pnkd	80	62.893	Monopterus_albus
ENSSTOG00000024593	PNKD	100	97.662	MGP_CAROLIEiJ_G0014258	Pnkd	100	97.662	Mus_caroli
ENSSTOG00000024593	PNKD	100	97.922	ENSMUSG00000026179	Pnkd	100	97.922	Mus_musculus
ENSSTOG00000024593	PNKD	100	97.922	MGP_PahariEiJ_G0027496	Pnkd	100	97.922	Mus_pahari
ENSSTOG00000024593	PNKD	100	97.662	MGP_SPRETEiJ_G0015064	Pnkd	100	97.662	Mus_spretus
ENSSTOG00000024593	PNKD	100	92.222	ENSMPUG00000016531	PNKD	100	92.222	Mustela_putorius_furo
ENSSTOG00000024593	PNKD	85	95.425	ENSMLUG00000004125	PNKD	100	95.425	Myotis_lucifugus
ENSSTOG00000024593	PNKD	100	96.883	ENSNGAG00000014980	Pnkd	100	96.883	Nannospalax_galili
ENSSTOG00000024593	PNKD	86	62.662	ENSNBRG00000020031	pnkd	96	62.460	Neolamprologus_brichardi
ENSSTOG00000024593	PNKD	100	73.766	ENSMEUG00000011266	PNKD	100	73.766	Notamacropus_eugenii
ENSSTOG00000024593	PNKD	100	95.833	ENSODEG00000009734	PNKD	100	95.833	Octodon_degus
ENSSTOG00000024593	PNKD	90	61.231	ENSONIG00000004389	pnkd	91	61.231	Oreochromis_niloticus
ENSSTOG00000024593	PNKD	100	94.811	ENSOCUG00000023754	PNKD	100	94.811	Oryctolagus_cuniculus
ENSSTOG00000024593	PNKD	90	59.819	ENSORLG00000026276	pnkd	97	56.160	Oryzias_latipes
ENSSTOG00000024593	PNKD	90	59.819	ENSORLG00020008373	pnkd	97	61.921	Oryzias_latipes_hni
ENSSTOG00000024593	PNKD	90	60.121	ENSORLG00015005276	pnkd	97	56.160	Oryzias_latipes_hsok
ENSSTOG00000024593	PNKD	89	61.059	ENSOMEG00000016106	pnkd	97	56.447	Oryzias_melastigma
ENSSTOG00000024593	PNKD	85	97.712	ENSOGAG00000001792	PNKD	100	97.712	Otolemur_garnettii
ENSSTOG00000024593	PNKD	100	95.584	ENSOARG00000019505	PNKD	100	95.584	Ovis_aries
ENSSTOG00000024593	PNKD	100	96.883	ENSPPAG00000034969	PNKD	100	96.883	Pan_paniscus
ENSSTOG00000024593	PNKD	100	92.500	ENSPPRG00000023720	PNKD	100	92.500	Panthera_pardus
ENSSTOG00000024593	PNKD	100	89.091	ENSPTIG00000021040	PNKD	100	89.091	Panthera_tigris_altaica
ENSSTOG00000024593	PNKD	100	96.623	ENSPTRG00000012914	PNKD	100	96.623	Pan_troglodytes
ENSSTOG00000024593	PNKD	100	97.143	ENSPANG00000005752	PNKD	100	97.143	Papio_anubis
ENSSTOG00000024593	PNKD	96	57.303	ENSPKIG00000011208	pnkd	100	60.377	Paramormyrops_kingsleyae
ENSSTOG00000024593	PNKD	85	60.131	ENSPMGG00000005169	pnkd	100	60.131	Periophthalmus_magnuspinnatus
ENSSTOG00000024593	PNKD	100	97.143	ENSPEMG00000010689	Pnkd	100	97.143	Peromyscus_maniculatus_bairdii
ENSSTOG00000024593	PNKD	85	54.902	ENSPMAG00000006947	pnkd	99	54.902	Petromyzon_marinus
ENSSTOG00000024593	PNKD	92	79.456	ENSPCIG00000021457	PNKD	91	79.456	Phascolarctos_cinereus
ENSSTOG00000024593	PNKD	89	62.305	ENSPFOG00000010628	pnkd	95	58.721	Poecilia_formosa
ENSSTOG00000024593	PNKD	64	65.652	ENSPLAG00000020583	pnkd	95	60.474	Poecilia_latipinna
ENSSTOG00000024593	PNKD	74	64.906	ENSPMEG00000006542	pnkd	73	60.417	Poecilia_mexicana
ENSSTOG00000024593	PNKD	89	61.682	ENSPREG00000014434	pnkd	95	57.726	Poecilia_reticulata
ENSSTOG00000024593	PNKD	100	96.883	ENSPPYG00000013167	PNKD	100	96.883	Pongo_abelii
ENSSTOG00000024593	PNKD	100	77.143	ENSPCAG00000003946	PNKD	100	77.143	Procavia_capensis
ENSSTOG00000024593	PNKD	100	97.922	ENSPCOG00000019839	PNKD	100	97.922	Propithecus_coquereli
ENSSTOG00000024593	PNKD	88	62.579	ENSPNYG00000016327	pnkd	100	62.579	Pundamilia_nyererei
ENSSTOG00000024593	PNKD	93	62.315	ENSPNAG00000008655	pnkd	92	62.651	Pygocentrus_nattereri
ENSSTOG00000024593	PNKD	100	97.662	ENSRNOG00000014806	Pnkd	100	97.662	Rattus_norvegicus
ENSSTOG00000024593	PNKD	100	97.143	ENSRBIG00000031614	PNKD	100	97.143	Rhinopithecus_bieti
ENSSTOG00000024593	PNKD	100	97.143	ENSRROG00000045542	PNKD	100	97.143	Rhinopithecus_roxellana
ENSSTOG00000024593	PNKD	100	96.364	ENSSBOG00000036000	PNKD	100	96.364	Saimiri_boliviensis_boliviensis
ENSSTOG00000024593	PNKD	88	80.997	ENSSHAG00000016339	PNKD	100	80.997	Sarcophilus_harrisii
ENSSTOG00000024593	PNKD	90	62.769	ENSSFOG00015013028	pnkd	87	62.769	Scleropages_formosus
ENSSTOG00000024593	PNKD	90	61.538	ENSSMAG00000006812	pnkd	91	61.538	Scophthalmus_maximus
ENSSTOG00000024593	PNKD	97	57.880	ENSSDUG00000012538	pnkd	99	56.022	Seriola_dumerili
ENSSTOG00000024593	PNKD	97	55.676	ENSSLDG00000021431	pnkd	88	60.615	Seriola_lalandi_dorsalis
ENSSTOG00000024593	PNKD	86	49.839	ENSSPUG00000018454	PNKD	98	52.614	Sphenodon_punctatus
ENSSTOG00000024593	PNKD	90	60.923	ENSSPAG00000007083	pnkd	91	60.923	Stegastes_partitus
ENSSTOG00000024593	PNKD	100	98.093	ENSSSCG00000029002	PNKD	100	96.623	Sus_scrofa
ENSSTOG00000024593	PNKD	96	57.391	ENSTRUG00000009399	pnkd	92	59.574	Takifugu_rubripes
ENSSTOG00000024593	PNKD	97	57.184	ENSTNIG00000010992	pnkd	90	60.748	Tetraodon_nigroviridis
ENSSTOG00000024593	PNKD	100	94.286	ENSTTRG00000012895	PNKD	100	94.286	Tursiops_truncatus
ENSSTOG00000024593	PNKD	100	91.389	ENSUAMG00000000289	PNKD	100	91.389	Ursus_americanus
ENSSTOG00000024593	PNKD	100	79.740	ENSUMAG00000019639	PNKD	100	79.740	Ursus_maritimus
ENSSTOG00000024593	PNKD	100	95.844	ENSVVUG00000007348	PNKD	100	95.844	Vulpes_vulpes
ENSSTOG00000024593	PNKD	86	63.987	ENSXETG00000014931	pnkd	99	64.401	Xenopus_tropicalis
ENSSTOG00000024593	PNKD	86	62.987	ENSXCOG00000014370	pnkd	95	62.987	Xiphophorus_couchianus