EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000025020 (Gene tree)
Gene ID: 101973398
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 21818 bases
Position: chrJH393540.1:1063516-1085333
Accession: 101973398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000021111	RRM_1	PF00076.22	6.9e-18	1	2
ENSSTOP00000021111	RRM_1	PF00076.22	6.9e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000028923	RNPC3-201	2200	XM_005339094	ENSSTOP00000021111	517 (aa)	XP_005339151	I3N9R4

Gene Model

Click here to download ENSSTOG00000025020's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000025020's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000025020	RNPC3	100	92.263	ENSG00000185946	RNPC3	100	92.263	Homo_sapiens
ENSSTOG00000025020	RNPC3	95	56.048	ENSAPOG00000017371	rnpc3	97	56.048	Acanthochromis_polyacanthus
ENSSTOG00000025020	RNPC3	98	91.913	ENSAMEG00000001694	RNPC3	100	90.769	Ailuropoda_melanoleuca
ENSSTOG00000025020	RNPC3	95	53.400	ENSACIG00000021043	rnpc3	97	53.000	Amphilophus_citrinellus
ENSSTOG00000025020	RNPC3	95	56.088	ENSAOCG00000014052	rnpc3	95	56.088	Amphiprion_ocellaris
ENSSTOG00000025020	RNPC3	95	55.888	ENSAPEG00000008739	rnpc3	95	55.888	Amphiprion_percula
ENSSTOG00000025020	RNPC3	95	54.455	ENSATEG00000021263	rnpc3	97	54.455	Anabas_testudineus
ENSSTOG00000025020	RNPC3	87	68.722	ENSAPLG00000015605	RNPC3	99	69.604	Anas_platyrhynchos
ENSSTOG00000025020	RNPC3	97	66.468	ENSACAG00000002029	RNPC3	99	66.926	Anolis_carolinensis
ENSSTOG00000025020	RNPC3	100	91.489	ENSANAG00000019950	RNPC3	100	91.489	Aotus_nancymaae
ENSSTOG00000025020	RNPC3	95	54.049	ENSACLG00000014702	rnpc3	96	54.049	Astatotilapia_calliptera
ENSSTOG00000025020	RNPC3	94	57.347	ENSAMXG00000033372	rnpc3	96	57.347	Astyanax_mexicanus
ENSSTOG00000025020	RNPC3	100	91.296	ENSBTAG00000019091	RNPC3	100	91.296	Bos_taurus
ENSSTOG00000025020	RNPC3	100	87.621	ENSCJAG00000035686	RNPC3	100	87.814	Callithrix_jacchus
ENSSTOG00000025020	RNPC3	100	90.347	ENSCAFG00000019972	RNPC3	100	90.347	Canis_familiaris
ENSSTOG00000025020	RNPC3	100	90.541	ENSCAFG00020011300	RNPC3	100	90.541	Canis_lupus_dingo
ENSSTOG00000025020	RNPC3	100	91.489	ENSCHIG00000020361	RNPC3	100	91.489	Capra_hircus
ENSSTOG00000025020	RNPC3	100	89.942	ENSTSYG00000030256	RNPC3	100	89.942	Carlito_syrichta
ENSSTOG00000025020	RNPC3	84	79.863	ENSCAPG00000013600	RNPC3	97	79.814	Cavia_aperea
ENSSTOG00000025020	RNPC3	100	90.716	ENSCPOG00000031638	RNPC3	100	90.716	Cavia_porcellus
ENSSTOG00000025020	RNPC3	100	91.296	ENSCCAG00000024301	RNPC3	100	91.296	Cebus_capucinus
ENSSTOG00000025020	RNPC3	99	91.845	ENSCATG00000002086	RNPC3	99	91.845	Cercocebus_atys
ENSSTOG00000025020	RNPC3	98	69.170	ENSCATG00000035930	-	98	67.984	Cercocebus_atys
ENSSTOG00000025020	RNPC3	100	87.814	ENSCLAG00000005169	RNPC3	100	89.749	Chinchilla_lanigera
ENSSTOG00000025020	RNPC3	99	91.650	ENSCSAG00000001519	RNPC3	99	91.650	Chlorocebus_sabaeus
ENSSTOG00000025020	RNPC3	95	70.020	ENSCPBG00000028311	RNPC3	95	70.221	Chrysemys_picta_bellii
ENSSTOG00000025020	RNPC3	95	39.243	ENSCING00000021276	-	98	39.715	Ciona_intestinalis
ENSSTOG00000025020	RNPC3	58	62.500	ENSCSAVG00000002800	-	74	62.500	Ciona_savignyi
ENSSTOG00000025020	RNPC3	99	91.650	ENSCANG00000031444	RNPC3	99	91.650	Colobus_angolensis_palliatus
ENSSTOG00000025020	RNPC3	99	88.760	ENSCGRG00001019276	Rnpc3	100	88.760	Cricetulus_griseus_chok1gshd
ENSSTOG00000025020	RNPC3	87	88.938	ENSCGRG00000000053	Rnpc3	100	88.938	Cricetulus_griseus_crigri
ENSSTOG00000025020	RNPC3	94	54.192	ENSCSEG00000013475	rnpc3	95	54.192	Cynoglossus_semilaevis
ENSSTOG00000025020	RNPC3	95	53.216	ENSCVAG00000002645	rnpc3	97	53.846	Cyprinodon_variegatus
ENSSTOG00000025020	RNPC3	95	55.888	ENSDARG00000011247	rnpc3	92	64.912	Danio_rerio
ENSSTOG00000025020	RNPC3	100	90.135	ENSDNOG00000044555	-	100	90.135	Dasypus_novemcinctus
ENSSTOG00000025020	RNPC3	100	90.135	ENSDNOG00000047498	-	100	90.135	Dasypus_novemcinctus
ENSSTOG00000025020	RNPC3	99	89.922	ENSDORG00000027343	Rnpc3	99	89.922	Dipodomys_ordii
ENSSTOG00000025020	RNPC3	95	47.741	ENSEBUG00000002068	rnpc3	97	48.221	Eptatretus_burgeri
ENSSTOG00000025020	RNPC3	100	90.154	ENSEASG00005015957	RNPC3	100	90.154	Equus_asinus_asinus
ENSSTOG00000025020	RNPC3	100	90.734	ENSECAG00000021148	RNPC3	100	90.734	Equus_caballus
ENSSTOG00000025020	RNPC3	95	52.987	ENSELUG00000002264	rnpc3	97	51.985	Esox_lucius
ENSSTOG00000025020	RNPC3	100	90.734	ENSFCAG00000024312	RNPC3	100	90.734	Felis_catus
ENSSTOG00000025020	RNPC3	87	71.806	ENSFALG00000002580	RNPC3	99	73.113	Ficedula_albicollis
ENSSTOG00000025020	RNPC3	99	91.473	ENSFDAG00000019948	RNPC3	100	91.473	Fukomys_damarensis
ENSSTOG00000025020	RNPC3	95	51.098	ENSFHEG00000020647	rnpc3	98	50.000	Fundulus_heteroclitus
ENSSTOG00000025020	RNPC3	95	53.955	ENSGMOG00000019213	rnpc3	95	52.846	Gadus_morhua
ENSSTOG00000025020	RNPC3	95	71.515	ENSGALG00000005162	RNPC3	89	70.909	Gallus_gallus
ENSSTOG00000025020	RNPC3	95	52.381	ENSGAFG00000017236	rnpc3	96	52.600	Gambusia_affinis
ENSSTOG00000025020	RNPC3	95	55.102	ENSGACG00000002048	rnpc3	96	54.365	Gasterosteus_aculeatus
ENSSTOG00000025020	RNPC3	95	69.618	ENSGAGG00000008438	RNPC3	95	70.020	Gopherus_agassizii
ENSSTOG00000025020	RNPC3	98	75.246	ENSGGOG00000026201	-	98	75.246	Gorilla_gorilla
ENSSTOG00000025020	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSSTOG00000025020	RNPC3	100	91.103	ENSHGLG00000001708	RNPC3	100	91.103	Heterocephalus_glaber_female
ENSSTOG00000025020	RNPC3	100	91.103	ENSHGLG00100003005	RNPC3	100	91.103	Heterocephalus_glaber_male
ENSSTOG00000025020	RNPC3	95	53.800	ENSHCOG00000017135	rnpc3	97	53.800	Hippocampus_comes
ENSSTOG00000025020	RNPC3	95	56.112	ENSIPUG00000002916	rnpc3	97	54.076	Ictalurus_punctatus
ENSSTOG00000025020	RNPC3	99	87.597	ENSJJAG00000010203	Rnpc3	100	88.566	Jaculus_jaculus
ENSSTOG00000025020	RNPC3	95	54.032	ENSKMAG00000017358	rnpc3	97	53.465	Kryptolebias_marmoratus
ENSSTOG00000025020	RNPC3	95	54.618	ENSLBEG00000024901	rnpc3	95	54.618	Labrus_bergylta
ENSSTOG00000025020	RNPC3	95	62.475	ENSLACG00000005720	RNPC3	90	63.083	Latimeria_chalumnae
ENSSTOG00000025020	RNPC3	95	58.078	ENSLOCG00000007986	rnpc3	96	61.224	Lepisosteus_oculatus
ENSSTOG00000025020	RNPC3	99	87.791	ENSLAFG00000032342	RNPC3	100	87.791	Loxodonta_africana
ENSSTOG00000025020	RNPC3	99	91.650	ENSMFAG00000002004	RNPC3	99	91.650	Macaca_fascicularis
ENSSTOG00000025020	RNPC3	98	66.798	ENSMFAG00000002917	-	98	66.601	Macaca_fascicularis
ENSSTOG00000025020	RNPC3	99	91.650	ENSMMUG00000018039	RNPC3	99	91.650	Macaca_mulatta
ENSSTOG00000025020	RNPC3	82	84.186	ENSMMUG00000002098	-	93	81.696	Macaca_mulatta
ENSSTOG00000025020	RNPC3	98	63.043	ENSMNEG00000029209	-	98	65.217	Macaca_nemestrina
ENSSTOG00000025020	RNPC3	99	86.796	ENSMNEG00000033950	RNPC3	99	86.796	Macaca_nemestrina
ENSSTOG00000025020	RNPC3	99	91.845	ENSMLEG00000033628	RNPC3	99	91.845	Mandrillus_leucophaeus
ENSSTOG00000025020	RNPC3	98	68.359	ENSMLEG00000034644	-	98	67.379	Mandrillus_leucophaeus
ENSSTOG00000025020	RNPC3	95	51.089	ENSMAMG00000007496	rnpc3	97	49.904	Mastacembelus_armatus
ENSSTOG00000025020	RNPC3	95	53.770	ENSMZEG00005020233	rnpc3	97	53.770	Maylandia_zebra
ENSSTOG00000025020	RNPC3	87	69.231	ENSMGAG00000006381	RNPC3	99	69.670	Meleagris_gallopavo
ENSSTOG00000025020	RNPC3	97	90.581	ENSMAUG00000001358	Rnpc3	100	89.535	Mesocricetus_auratus
ENSSTOG00000025020	RNPC3	99	93.023	ENSMICG00000029591	RNPC3	99	93.023	Microcebus_murinus
ENSSTOG00000025020	RNPC3	97	90.200	ENSMOCG00000013423	Rnpc3	100	88.803	Microtus_ochrogaster
ENSSTOG00000025020	RNPC3	95	50.913	ENSMMOG00000005309	rnpc3	97	50.898	Mola_mola
ENSSTOG00000025020	RNPC3	99	77.713	ENSMODG00000002946	RNPC3	99	77.713	Monodelphis_domestica
ENSSTOG00000025020	RNPC3	95	52.087	ENSMALG00000015471	rnpc3	97	52.087	Monopterus_albus
ENSSTOG00000025020	RNPC3	99	87.209	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.623	Mus_caroli
ENSSTOG00000025020	RNPC3	99	87.791	ENSMUSG00000027981	Rnpc3	100	87.791	Mus_musculus
ENSSTOG00000025020	RNPC3	99	87.403	MGP_PahariEiJ_G0027001	Rnpc3	100	87.819	Mus_pahari
ENSSTOG00000025020	RNPC3	99	87.209	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.623	Mus_spretus
ENSSTOG00000025020	RNPC3	100	90.154	ENSMPUG00000007349	RNPC3	100	90.154	Mustela_putorius_furo
ENSSTOG00000025020	RNPC3	100	88.201	ENSMLUG00000028743	RNPC3	100	88.201	Myotis_lucifugus
ENSSTOG00000025020	RNPC3	99	90.272	ENSNGAG00000010939	Rnpc3	99	90.272	Nannospalax_galili
ENSSTOG00000025020	RNPC3	95	53.846	ENSNBRG00000012196	rnpc3	93	53.846	Neolamprologus_brichardi
ENSSTOG00000025020	RNPC3	100	92.070	ENSNLEG00000012013	RNPC3	100	92.070	Nomascus_leucogenys
ENSSTOG00000025020	RNPC3	100	87.427	ENSODEG00000007612	RNPC3	100	87.427	Octodon_degus
ENSSTOG00000025020	RNPC3	95	54.527	ENSONIG00000004770	rnpc3	99	54.545	Oreochromis_niloticus
ENSSTOG00000025020	RNPC3	90	77.253	ENSOANG00000008220	RNPC3	99	77.468	Ornithorhynchus_anatinus
ENSSTOG00000025020	RNPC3	100	90.909	ENSOCUG00000004016	RNPC3	100	90.909	Oryctolagus_cuniculus
ENSSTOG00000025020	RNPC3	95	53.815	ENSORLG00000005694	rnpc3	97	53.815	Oryzias_latipes
ENSSTOG00000025020	RNPC3	95	54.125	ENSORLG00020005513	rnpc3	97	54.125	Oryzias_latipes_hni
ENSSTOG00000025020	RNPC3	95	53.614	ENSORLG00015002179	rnpc3	97	53.614	Oryzias_latipes_hsok
ENSSTOG00000025020	RNPC3	95	54.527	ENSOMEG00000017737	rnpc3	97	55.622	Oryzias_melastigma
ENSSTOG00000025020	RNPC3	100	92.456	ENSOGAG00000026182	RNPC3	100	92.456	Otolemur_garnettii
ENSSTOG00000025020	RNPC3	100	91.296	ENSOARG00000018719	RNPC3	100	91.296	Ovis_aries
ENSSTOG00000025020	RNPC3	100	75.048	ENSPPAG00000030278	-	100	75.242	Pan_paniscus
ENSSTOG00000025020	RNPC3	100	91.892	ENSPPAG00000037459	RNPC3	100	91.892	Pan_paniscus
ENSSTOG00000025020	RNPC3	100	90.541	ENSPPRG00000020246	RNPC3	100	90.541	Panthera_pardus
ENSSTOG00000025020	RNPC3	98	90.945	ENSPTIG00000009887	RNPC3	99	91.304	Panthera_tigris_altaica
ENSSTOG00000025020	RNPC3	100	92.070	ENSPTRG00000033902	RNPC3	100	92.070	Pan_troglodytes
ENSSTOG00000025020	RNPC3	100	75.048	ENSPTRG00000044227	-	100	75.048	Pan_troglodytes
ENSSTOG00000025020	RNPC3	99	91.845	ENSPANG00000012137	RNPC3	99	91.845	Papio_anubis
ENSSTOG00000025020	RNPC3	98	71.654	ENSPANG00000029957	-	99	70.472	Papio_anubis
ENSSTOG00000025020	RNPC3	94	53.049	ENSPKIG00000008828	rnpc3	95	51.569	Paramormyrops_kingsleyae
ENSSTOG00000025020	RNPC3	63	68.580	ENSPSIG00000007396	RNPC3	99	67.372	Pelodiscus_sinensis
ENSSTOG00000025020	RNPC3	93	51.020	ENSPMGG00000011742	rnpc3	95	50.816	Periophthalmus_magnuspinnatus
ENSSTOG00000025020	RNPC3	88	88.403	ENSPEMG00000020112	Rnpc3	100	89.159	Peromyscus_maniculatus_bairdii
ENSSTOG00000025020	RNPC3	51	45.522	ENSPMAG00000003778	rnpc3	98	43.595	Petromyzon_marinus
ENSSTOG00000025020	RNPC3	99	78.488	ENSPCIG00000004415	-	99	78.488	Phascolarctos_cinereus
ENSSTOG00000025020	RNPC3	95	51.904	ENSPFOG00000009895	rnpc3	97	51.904	Poecilia_formosa
ENSSTOG00000025020	RNPC3	95	51.703	ENSPLAG00000012023	rnpc3	97	51.703	Poecilia_latipinna
ENSSTOG00000025020	RNPC3	95	52.495	ENSPMEG00000003663	rnpc3	97	52.104	Poecilia_mexicana
ENSSTOG00000025020	RNPC3	96	51.889	ENSPREG00000010206	rnpc3	97	52.000	Poecilia_reticulata
ENSSTOG00000025020	RNPC3	84	88.710	ENSPPYG00000001102	RNPC3	99	88.710	Pongo_abelii
ENSSTOG00000025020	RNPC3	95	53.846	ENSPNYG00000020603	rnpc3	96	53.846	Pundamilia_nyererei
ENSSTOG00000025020	RNPC3	95	53.968	ENSPNAG00000000524	rnpc3	89	54.365	Pygocentrus_nattereri
ENSSTOG00000025020	RNPC3	99	87.403	ENSRNOG00000017310	Rnpc3	100	87.403	Rattus_norvegicus
ENSSTOG00000025020	RNPC3	99	86.434	ENSRBIG00000043897	RNPC3	99	86.434	Rhinopithecus_bieti
ENSSTOG00000025020	RNPC3	99	92.233	ENSRROG00000032334	RNPC3	99	92.233	Rhinopithecus_roxellana
ENSSTOG00000025020	RNPC3	100	91.296	ENSSBOG00000024473	RNPC3	100	91.296	Saimiri_boliviensis_boliviensis
ENSSTOG00000025020	RNPC3	99	77.713	ENSSHAG00000011859	RNPC3	99	77.713	Sarcophilus_harrisii
ENSSTOG00000025020	RNPC3	96	58.964	ENSSFOG00015013055	rnpc3	99	56.977	Scleropages_formosus
ENSSTOG00000025020	RNPC3	95	52.096	ENSSMAG00000020346	rnpc3	97	50.581	Scophthalmus_maximus
ENSSTOG00000025020	RNPC3	95	53.892	ENSSDUG00000006600	rnpc3	96	53.892	Seriola_dumerili
ENSSTOG00000025020	RNPC3	95	53.892	ENSSLDG00000007979	rnpc3	96	53.892	Seriola_lalandi_dorsalis
ENSSTOG00000025020	RNPC3	96	65.000	ENSSPUG00000003872	-	92	65.323	Sphenodon_punctatus
ENSSTOG00000025020	RNPC3	93	71.488	ENSSPUG00000008539	-	92	71.694	Sphenodon_punctatus
ENSSTOG00000025020	RNPC3	95	55.081	ENSSPAG00000005633	rnpc3	97	55.691	Stegastes_partitus
ENSSTOG00000025020	RNPC3	100	90.716	ENSSSCG00000037254	RNPC3	100	91.103	Sus_scrofa
ENSSTOG00000025020	RNPC3	87	70.640	ENSTGUG00000004795	-	99	69.757	Taeniopygia_guttata
ENSSTOG00000025020	RNPC3	95	55.110	ENSTNIG00000018963	rnpc3	97	54.910	Tetraodon_nigroviridis
ENSSTOG00000025020	RNPC3	98	92.095	ENSUMAG00000007775	RNPC3	99	92.095	Ursus_maritimus
ENSSTOG00000025020	RNPC3	100	90.541	ENSVVUG00000000331	RNPC3	100	90.541	Vulpes_vulpes
ENSSTOG00000025020	RNPC3	97	52.250	ENSXETG00000025027	rnpc3	99	52.250	Xenopus_tropicalis
ENSSTOG00000025020	RNPC3	95	51.961	ENSXCOG00000005013	rnpc3	97	50.573	Xiphophorus_couchianus
ENSSTOG00000025020	RNPC3	95	52.268	ENSXMAG00000006495	rnpc3	97	52.485	Xiphophorus_maculatus