EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000025032 (Gene tree)
Gene ID: 101974242
Gene Symbol: PRPF38B
Alias: FLJ10330|NET1
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 7729 bases
Position: chrJH393514.1:273282-281010
Accession: 101974242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000022335	PRP38	PF03371.15	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027196	PRPF38B-201	1653	XM_005338060	ENSSTOP00000022335	550 (aa)	XP_005338117	I3ND88

Gene Model

Click here to download ENSSTOG00000025032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000025032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000025032	PRPF38B	100	95.273	ENSAMEG00000004364	-	100	95.273	Ailuropoda_melanoleuca
ENSSTOG00000025032	PRPF38B	100	97.273	ENSCAFG00000029761	PRPF38B	100	97.273	Canis_familiaris
ENSSTOG00000025032	PRPF38B	100	96.182	ENSEASG00005000210	PRPF38B	100	96.182	Equus_asinus_asinus
ENSSTOG00000025032	PRPF38B	100	97.818	ENSFCAG00000039965	PRPF38B	100	97.818	Felis_catus
ENSSTOG00000025032	PRPF38B	100	97.818	ENSMPUG00000002738	PRPF38B	100	97.818	Mustela_putorius_furo
ENSSTOG00000025032	PRPF38B	100	90.018	ENSNGAG00000011476	-	100	93.648	Nannospalax_galili
ENSSTOG00000025032	PRPF38B	94	97.683	ENSPTIG00000015015	PRPF38B	98	97.683	Panthera_tigris_altaica
ENSSTOG00000025032	PRPF38B	100	97.636	ENSVVUG00000000684	-	100	97.636	Vulpes_vulpes