EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000025280 (Gene tree)
Gene ID: 101969784
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 13256 bases
Position: chrJH393382.1:6013582-6026837
Accession: 101969784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017874	PseudoU_synth_2	PF00849.22	7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000025755	RPUSD4-201	1439	XM_005330762	ENSSTOP00000017874	363 (aa)	XP_005330819	I3N0H8

Gene Model

Click here to download ENSSTOG00000025280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000025280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000025280	RPUSD4	76	30.405	ENSSTOG00000002125	RPUSD3	80	30.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000025280	RPUSD4	100	83.516	ENSG00000165526	RPUSD4	97	83.516	Homo_sapiens
ENSSTOG00000025280	RPUSD4	92	51.775	ENSAPOG00000011024	rpusd4	84	51.775	Acanthochromis_polyacanthus
ENSSTOG00000025280	RPUSD4	83	77.778	ENSAMEG00000005953	-	94	77.778	Ailuropoda_melanoleuca
ENSSTOG00000025280	RPUSD4	100	82.967	ENSAMEG00000000127	-	97	82.967	Ailuropoda_melanoleuca
ENSSTOG00000025280	RPUSD4	86	52.188	ENSACIG00000003533	rpusd4	94	52.188	Amphilophus_citrinellus
ENSSTOG00000025280	RPUSD4	91	52.836	ENSAOCG00000015409	rpusd4	83	52.836	Amphiprion_ocellaris
ENSSTOG00000025280	RPUSD4	91	53.134	ENSAPEG00000018935	rpusd4	83	53.134	Amphiprion_percula
ENSSTOG00000025280	RPUSD4	91	51.312	ENSATEG00000008059	rpusd4	85	51.312	Anabas_testudineus
ENSSTOG00000025280	RPUSD4	76	61.649	ENSAPLG00000013250	RPUSD4	99	60.410	Anas_platyrhynchos
ENSSTOG00000025280	RPUSD4	91	64.671	ENSACAG00000000189	RPUSD4	91	64.671	Anolis_carolinensis
ENSSTOG00000025280	RPUSD4	100	83.791	ENSANAG00000024050	RPUSD4	98	83.791	Aotus_nancymaae
ENSSTOG00000025280	RPUSD4	89	52.294	ENSACLG00000020996	rpusd4	83	52.294	Astatotilapia_calliptera
ENSSTOG00000025280	RPUSD4	93	49.422	ENSAMXG00000031479	rpusd4	95	50.148	Astyanax_mexicanus
ENSSTOG00000025280	RPUSD4	100	79.121	ENSBTAG00000020900	RPUSD4	97	79.121	Bos_taurus
ENSSTOG00000025280	RPUSD4	100	84.066	ENSCJAG00000042850	RPUSD4	92	84.066	Callithrix_jacchus
ENSSTOG00000025280	RPUSD4	100	81.918	ENSCAFG00000010488	RPUSD4	97	81.918	Canis_familiaris
ENSSTOG00000025280	RPUSD4	100	81.918	ENSCAFG00020010621	RPUSD4	97	81.918	Canis_lupus_dingo
ENSSTOG00000025280	RPUSD4	100	80.822	ENSCHIG00000009975	RPUSD4	97	80.822	Capra_hircus
ENSSTOG00000025280	RPUSD4	100	86.226	ENSTSYG00000008456	RPUSD4	97	86.226	Carlito_syrichta
ENSSTOG00000025280	RPUSD4	67	82.449	ENSCAPG00000006040	RPUSD4	95	82.449	Cavia_aperea
ENSSTOG00000025280	RPUSD4	100	83.471	ENSCPOG00000014971	RPUSD4	97	83.471	Cavia_porcellus
ENSSTOG00000025280	RPUSD4	100	84.890	ENSCCAG00000027838	RPUSD4	98	84.890	Cebus_capucinus
ENSSTOG00000025280	RPUSD4	100	83.516	ENSCATG00000041570	RPUSD4	97	83.516	Cercocebus_atys
ENSSTOG00000025280	RPUSD4	100	85.165	ENSCLAG00000016553	RPUSD4	97	85.165	Chinchilla_lanigera
ENSSTOG00000025280	RPUSD4	100	83.242	ENSCSAG00000002274	RPUSD4	97	83.242	Chlorocebus_sabaeus
ENSSTOG00000025280	RPUSD4	74	87.407	ENSCHOG00000010249	RPUSD4	95	87.407	Choloepus_hoffmanni
ENSSTOG00000025280	RPUSD4	78	70.526	ENSCPBG00000011175	RPUSD4	98	70.526	Chrysemys_picta_bellii
ENSSTOG00000025280	RPUSD4	74	43.525	ENSCSAVG00000000872	-	54	43.525	Ciona_savignyi
ENSSTOG00000025280	RPUSD4	100	82.418	ENSCANG00000039684	RPUSD4	97	82.418	Colobus_angolensis_palliatus
ENSSTOG00000025280	RPUSD4	100	83.516	ENSCGRG00001024141	Rpusd4	97	83.516	Cricetulus_griseus_chok1gshd
ENSSTOG00000025280	RPUSD4	100	83.516	ENSCGRG00000014415	Rpusd4	97	83.516	Cricetulus_griseus_crigri
ENSSTOG00000025280	RPUSD4	53	42.784	ENSCSEG00000006462	-	85	42.784	Cynoglossus_semilaevis
ENSSTOG00000025280	RPUSD4	90	52.711	ENSCVAG00000000392	rpusd4	94	52.711	Cyprinodon_variegatus
ENSSTOG00000025280	RPUSD4	90	52.410	ENSCVAG00000008761	rpusd4	84	52.410	Cyprinodon_variegatus
ENSSTOG00000025280	RPUSD4	95	46.991	ENSDARG00000012674	rpusd4	97	46.991	Danio_rerio
ENSSTOG00000025280	RPUSD4	100	79.396	ENSDNOG00000020026	RPUSD4	97	79.396	Dasypus_novemcinctus
ENSSTOG00000025280	RPUSD4	100	81.593	ENSDORG00000016717	Rpusd4	97	81.593	Dipodomys_ordii
ENSSTOG00000025280	RPUSD4	100	80.716	ENSETEG00000013953	RPUSD4	97	80.716	Echinops_telfairi
ENSSTOG00000025280	RPUSD4	100	85.714	ENSEASG00005022982	RPUSD4	97	85.714	Equus_asinus_asinus
ENSSTOG00000025280	RPUSD4	100	85.165	ENSECAG00000000557	RPUSD4	97	85.165	Equus_caballus
ENSSTOG00000025280	RPUSD4	81	82.584	ENSEEUG00000014036	RPUSD4	78	82.584	Erinaceus_europaeus
ENSSTOG00000025280	RPUSD4	89	56.637	ENSELUG00000008075	rpusd4	88	56.637	Esox_lucius
ENSSTOG00000025280	RPUSD4	100	81.868	ENSFCAG00000029789	RPUSD4	97	81.868	Felis_catus
ENSSTOG00000025280	RPUSD4	91	58.859	ENSFALG00000005171	RPUSD4	98	58.859	Ficedula_albicollis
ENSSTOG00000025280	RPUSD4	100	84.066	ENSFDAG00000014307	RPUSD4	97	84.066	Fukomys_damarensis
ENSSTOG00000025280	RPUSD4	92	50.565	ENSFHEG00000004329	rpusd4	91	50.565	Fundulus_heteroclitus
ENSSTOG00000025280	RPUSD4	88	51.385	ENSGMOG00000017726	rpusd4	96	51.385	Gadus_morhua
ENSSTOG00000025280	RPUSD4	77	63.830	ENSGALG00000024326	RPUSD4	99	57.183	Gallus_gallus
ENSSTOG00000025280	RPUSD4	87	50.000	ENSGAFG00000021559	rpusd4	81	50.000	Gambusia_affinis
ENSSTOG00000025280	RPUSD4	92	50.442	ENSGACG00000001657	rpusd4	100	50.442	Gasterosteus_aculeatus
ENSSTOG00000025280	RPUSD4	95	64.553	ENSGAGG00000000132	RPUSD4	96	64.553	Gopherus_agassizii
ENSSTOG00000025280	RPUSD4	100	83.791	ENSGGOG00000016494	RPUSD4	97	83.791	Gorilla_gorilla
ENSSTOG00000025280	RPUSD4	89	52.294	ENSHBUG00000022838	rpusd4	83	52.294	Haplochromis_burtoni
ENSSTOG00000025280	RPUSD4	100	85.440	ENSHGLG00000002285	RPUSD4	97	85.440	Heterocephalus_glaber_female
ENSSTOG00000025280	RPUSD4	100	85.440	ENSHGLG00100006385	RPUSD4	97	85.440	Heterocephalus_glaber_male
ENSSTOG00000025280	RPUSD4	89	52.599	ENSHCOG00000006612	rpusd4	83	52.599	Hippocampus_comes
ENSSTOG00000025280	RPUSD4	89	53.049	ENSIPUG00000023879	rusd4	85	53.049	Ictalurus_punctatus
ENSSTOG00000025280	RPUSD4	99	84.211	ENSJJAG00000018673	Rpusd4	97	84.211	Jaculus_jaculus
ENSSTOG00000025280	RPUSD4	90	53.433	ENSKMAG00000021805	rpusd4	87	53.433	Kryptolebias_marmoratus
ENSSTOG00000025280	RPUSD4	86	53.727	ENSLBEG00000020394	rpusd4	90	53.727	Labrus_bergylta
ENSSTOG00000025280	RPUSD4	88	62.539	ENSLACG00000011028	RPUSD4	85	61.310	Latimeria_chalumnae
ENSSTOG00000025280	RPUSD4	88	49.231	ENSLOCG00000003124	rpusd4	86	49.231	Lepisosteus_oculatus
ENSSTOG00000025280	RPUSD4	100	81.818	ENSLAFG00000005211	RPUSD4	97	81.818	Loxodonta_africana
ENSSTOG00000025280	RPUSD4	100	83.791	ENSMFAG00000039513	RPUSD4	97	83.791	Macaca_fascicularis
ENSSTOG00000025280	RPUSD4	100	83.516	ENSMMUG00000007933	RPUSD4	97	83.516	Macaca_mulatta
ENSSTOG00000025280	RPUSD4	100	83.516	ENSMNEG00000027414	RPUSD4	97	83.516	Macaca_nemestrina
ENSSTOG00000025280	RPUSD4	100	83.516	ENSMLEG00000042461	RPUSD4	97	83.516	Mandrillus_leucophaeus
ENSSTOG00000025280	RPUSD4	96	49.020	ENSMAMG00000023839	rpusd4	92	49.020	Mastacembelus_armatus
ENSSTOG00000025280	RPUSD4	89	52.294	ENSMZEG00005011999	rpusd4	83	52.294	Maylandia_zebra
ENSSTOG00000025280	RPUSD4	77	62.143	ENSMGAG00000000840	RPUSD4	99	59.938	Meleagris_gallopavo
ENSSTOG00000025280	RPUSD4	100	81.868	ENSMAUG00000010280	Rpusd4	97	81.868	Mesocricetus_auratus
ENSSTOG00000025280	RPUSD4	100	84.341	ENSMICG00000015979	RPUSD4	97	84.341	Microcebus_murinus
ENSSTOG00000025280	RPUSD4	100	79.670	ENSMOCG00000000661	Rpusd4	97	79.670	Microtus_ochrogaster
ENSSTOG00000025280	RPUSD4	86	53.774	ENSMMOG00000021731	rpusd4	93	53.774	Mola_mola
ENSSTOG00000025280	RPUSD4	90	76.074	ENSMODG00000004521	RPUSD4	84	76.074	Monodelphis_domestica
ENSSTOG00000025280	RPUSD4	82	53.618	ENSMALG00000005839	rpusd4	97	52.025	Monopterus_albus
ENSSTOG00000025280	RPUSD4	100	81.044	MGP_CAROLIEiJ_G0031954	Rpusd4	97	81.044	Mus_caroli
ENSSTOG00000025280	RPUSD4	100	80.769	ENSMUSG00000032044	Rpusd4	97	80.769	Mus_musculus
ENSSTOG00000025280	RPUSD4	100	81.319	MGP_PahariEiJ_G0014819	Rpusd4	97	81.319	Mus_pahari
ENSSTOG00000025280	RPUSD4	100	80.495	MGP_SPRETEiJ_G0033078	Rpusd4	97	80.495	Mus_spretus
ENSSTOG00000025280	RPUSD4	100	80.769	ENSMPUG00000006608	RPUSD4	97	80.769	Mustela_putorius_furo
ENSSTOG00000025280	RPUSD4	100	81.096	ENSMLUG00000017328	-	96	81.096	Myotis_lucifugus
ENSSTOG00000025280	RPUSD4	70	84.252	ENSMLUG00000029348	-	100	84.252	Myotis_lucifugus
ENSSTOG00000025280	RPUSD4	100	82.143	ENSNGAG00000020847	Rpusd4	97	82.143	Nannospalax_galili
ENSSTOG00000025280	RPUSD4	88	52.308	ENSNBRG00000005207	rpusd4	94	52.308	Neolamprologus_brichardi
ENSSTOG00000025280	RPUSD4	100	83.516	ENSNLEG00000007465	RPUSD4	97	83.516	Nomascus_leucogenys
ENSSTOG00000025280	RPUSD4	100	70.055	ENSMEUG00000004370	RPUSD4	98	70.055	Notamacropus_eugenii
ENSSTOG00000025280	RPUSD4	73	62.121	ENSOPRG00000013141	-	100	62.121	Ochotona_princeps
ENSSTOG00000025280	RPUSD4	100	83.516	ENSODEG00000004577	RPUSD4	97	83.516	Octodon_degus
ENSSTOG00000025280	RPUSD4	91	52.212	ENSONIG00000018879	rpusd4	91	52.212	Oreochromis_niloticus
ENSSTOG00000025280	RPUSD4	80	69.831	ENSOANG00000007247	RPUSD4	95	69.697	Ornithorhynchus_anatinus
ENSSTOG00000025280	RPUSD4	100	84.341	ENSOCUG00000017039	RPUSD4	97	84.341	Oryctolagus_cuniculus
ENSSTOG00000025280	RPUSD4	91	50.893	ENSORLG00000002750	rpusd4	92	50.893	Oryzias_latipes
ENSSTOG00000025280	RPUSD4	88	51.852	ENSORLG00020002044	rpusd4	81	51.852	Oryzias_latipes_hni
ENSSTOG00000025280	RPUSD4	88	52.000	ENSORLG00015020034	rpusd4	81	52.000	Oryzias_latipes_hsok
ENSSTOG00000025280	RPUSD4	87	52.795	ENSOMEG00000004861	rpusd4	79	52.795	Oryzias_melastigma
ENSSTOG00000025280	RPUSD4	99	82.692	ENSOGAG00000008922	RPUSD4	96	82.692	Otolemur_garnettii
ENSSTOG00000025280	RPUSD4	98	81.461	ENSOARG00000012238	RPUSD4	96	80.495	Ovis_aries
ENSSTOG00000025280	RPUSD4	100	83.791	ENSPPAG00000042883	RPUSD4	90	83.791	Pan_paniscus
ENSSTOG00000025280	RPUSD4	100	81.868	ENSPPRG00000003081	RPUSD4	97	81.868	Panthera_pardus
ENSSTOG00000025280	RPUSD4	100	81.868	ENSPTIG00000012059	RPUSD4	97	81.868	Panthera_tigris_altaica
ENSSTOG00000025280	RPUSD4	100	83.516	ENSPTRG00000004454	RPUSD4	97	83.516	Pan_troglodytes
ENSSTOG00000025280	RPUSD4	100	83.791	ENSPANG00000015040	RPUSD4	97	83.791	Papio_anubis
ENSSTOG00000025280	RPUSD4	91	58.383	ENSPKIG00000023986	rpusd4	85	58.383	Paramormyrops_kingsleyae
ENSSTOG00000025280	RPUSD4	82	68.000	ENSPSIG00000014268	RPUSD4	95	68.000	Pelodiscus_sinensis
ENSSTOG00000025280	RPUSD4	94	47.714	ENSPMGG00000002806	rpusd4	98	47.714	Periophthalmus_magnuspinnatus
ENSSTOG00000025280	RPUSD4	100	74.176	ENSPEMG00000000278	Rpusd4	96	74.176	Peromyscus_maniculatus_bairdii
ENSSTOG00000025280	RPUSD4	83	44.444	ENSPMAG00000008183	rpusd4	96	44.444	Petromyzon_marinus
ENSSTOG00000025280	RPUSD4	99	71.074	ENSPCIG00000010212	RPUSD4	99	71.074	Phascolarctos_cinereus
ENSSTOG00000025280	RPUSD4	92	50.145	ENSPFOG00000019030	rpusd4	90	50.145	Poecilia_formosa
ENSSTOG00000025280	RPUSD4	92	50.729	ENSPLAG00000016848	rpusd4	87	50.729	Poecilia_latipinna
ENSSTOG00000025280	RPUSD4	87	50.938	ENSPMEG00000017534	rpusd4	81	50.938	Poecilia_mexicana
ENSSTOG00000025280	RPUSD4	90	50.148	ENSPREG00000005689	rpusd4	87	50.148	Poecilia_reticulata
ENSSTOG00000025280	RPUSD4	100	84.066	ENSPPYG00000004043	RPUSD4	97	84.066	Pongo_abelii
ENSSTOG00000025280	RPUSD4	81	84.270	ENSPCAG00000000753	RPUSD4	80	84.270	Procavia_capensis
ENSSTOG00000025280	RPUSD4	100	76.923	ENSPCOG00000020694	RPUSD4	98	76.923	Propithecus_coquereli
ENSSTOG00000025280	RPUSD4	100	84.341	ENSPVAG00000000988	RPUSD4	97	84.341	Pteropus_vampyrus
ENSSTOG00000025280	RPUSD4	89	51.988	ENSPNYG00000009652	rpusd4	83	51.988	Pundamilia_nyererei
ENSSTOG00000025280	RPUSD4	91	52.096	ENSPNAG00000012264	rpusd4	88	52.096	Pygocentrus_nattereri
ENSSTOG00000025280	RPUSD4	100	81.319	ENSRNOG00000011567	Rpusd4	97	81.319	Rattus_norvegicus
ENSSTOG00000025280	RPUSD4	99	83.934	ENSRBIG00000034842	RPUSD4	97	83.791	Rhinopithecus_bieti
ENSSTOG00000025280	RPUSD4	99	83.934	ENSRROG00000039753	RPUSD4	97	83.791	Rhinopithecus_roxellana
ENSSTOG00000025280	RPUSD4	100	83.242	ENSSBOG00000030413	RPUSD4	98	83.242	Saimiri_boliviensis_boliviensis
ENSSTOG00000025280	RPUSD4	83	77.000	ENSSHAG00000008304	RPUSD4	99	77.000	Sarcophilus_harrisii
ENSSTOG00000025280	RPUSD4	91	57.522	ENSSFOG00015006203	rpusd4	85	61.006	Scleropages_formosus
ENSSTOG00000025280	RPUSD4	98	48.919	ENSSMAG00000020978	rpusd4	97	48.919	Scophthalmus_maximus
ENSSTOG00000025280	RPUSD4	91	49.405	ENSSDUG00000013399	rpusd4	88	49.405	Seriola_dumerili
ENSSTOG00000025280	RPUSD4	91	49.702	ENSSLDG00000023507	rpusd4	88	49.702	Seriola_lalandi_dorsalis
ENSSTOG00000025280	RPUSD4	91	63.690	ENSSPUG00000001401	RPUSD4	92	63.988	Sphenodon_punctatus
ENSSTOG00000025280	RPUSD4	96	50.660	ENSSPAG00000012163	rpusd4	96	50.660	Stegastes_partitus
ENSSTOG00000025280	RPUSD4	100	83.471	ENSSSCG00000015233	RPUSD4	97	83.471	Sus_scrofa
ENSSTOG00000025280	RPUSD4	82	60.535	ENSTGUG00000000773	RPUSD4	99	60.535	Taeniopygia_guttata
ENSSTOG00000025280	RPUSD4	89	51.524	ENSTRUG00000012283	rpusd4	84	51.524	Takifugu_rubripes
ENSSTOG00000025280	RPUSD4	93	50.877	ENSTNIG00000014676	rpusd4	87	50.877	Tetraodon_nigroviridis
ENSSTOG00000025280	RPUSD4	100	83.196	ENSTTRG00000001555	RPUSD4	97	83.196	Tursiops_truncatus
ENSSTOG00000025280	RPUSD4	51	83.871	ENSUAMG00000005503	-	97	83.871	Ursus_americanus
ENSSTOG00000025280	RPUSD4	100	82.418	ENSUMAG00000002219	RPUSD4	97	82.418	Ursus_maritimus
ENSSTOG00000025280	RPUSD4	73	83.712	ENSVPAG00000001066	RPUSD4	100	83.712	Vicugna_pacos
ENSSTOG00000025280	RPUSD4	100	82.466	ENSVVUG00000020101	RPUSD4	97	82.466	Vulpes_vulpes
ENSSTOG00000025280	RPUSD4	87	51.562	ENSXCOG00000004676	rpusd4	83	51.250	Xiphophorus_couchianus
ENSSTOG00000025280	RPUSD4	96	49.171	ENSXMAG00000023351	rpusd4	92	49.171	Xiphophorus_maculatus