EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000025552 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1042 bases
Position: chrJH393302.1:2296345-2297386
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000020753	RRM_1	PF00076.22	7.8e-22	1	2
ENSSTOP00000020753	RRM_1	PF00076.22	7.8e-22	2	2
ENSSTOP00000020753	HnRNPA1	PF11627.8	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027818	-	879	-	ENSSTOP00000020753	292 (aa)	-	I3N8Q7

Gene Model

Click here to download ENSSTOG00000025552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000025552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000025552	-	62	56.452	ENSSTOG00000034897	-	61	54.737
ENSSTOG00000025552	-	57	59.444	ENSSTOG00000025292	-	71	59.162
ENSSTOG00000025552	-	59	54.945	ENSSTOG00000033766	-	60	53.333
ENSSTOG00000025552	-	57	63.333	ENSSTOG00000025125	HNRNPA3	64	60.396
ENSSTOG00000025552	-	76	31.915	ENSSTOG00000013970	HNRNPD	60	33.333
ENSSTOG00000025552	-	53	31.176	ENSSTOG00000013979	HNRNPDL	52	31.606
ENSSTOG00000025552	-	59	56.354	ENSSTOG00000025851	-	60	55.729
ENSSTOG00000025552	-	98	48.837	ENSSTOG00000020987	-	66	57.286
ENSSTOG00000025552	-	54	65.152	ENSSTOG00000015259	-	61	63.636
ENSSTOG00000025552	-	55	35.227	ENSSTOG00000024394	HNRNPAB	62	35.519
ENSSTOG00000025552	-	59	61.828	ENSSTOG00000006551	-	62	60.302
ENSSTOG00000025552	-	98	77.695	ENSSTOG00000024155	-	94	74.721
ENSSTOG00000025552	-	57	73.885	ENSSTOG00000034171	-	87	73.885
ENSSTOG00000025552	-	65	79.082	ENSSTOG00000026412	-	57	79.235
ENSSTOG00000025552	-	57	44.693	ENSSTOG00000028543	-	69	44.500
ENSSTOG00000025552	-	90	69.395	ENSSTOG00000006202	-	92	72.293
ENSSTOG00000025552	-	66	78.261	ENSSTOG00000029449	-	74	76.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000025552	-	65	73.991	ENSG00000122566	HNRNPA2B1	92	71.975	Homo_sapiens
ENSSTOG00000025552	-	67	71.795	ENSAMEG00000005983	HNRNPA2B1	89	71.746	Ailuropoda_melanoleuca
ENSSTOG00000025552	-	65	72.321	ENSAPLG00000012019	HNRNPA2B1	89	70.794	Anas_platyrhynchos
ENSSTOG00000025552	-	61	79.793	ENSACAG00000012992	HNRNPA2B1	58	79.793	Anolis_carolinensis
ENSSTOG00000025552	-	91	69.149	ENSANAG00000033016	HNRNPA2B1	92	71.975	Aotus_nancymaae
ENSSTOG00000025552	-	91	73.404	ENSANAG00000020524	-	91	73.498	Aotus_nancymaae
ENSSTOG00000025552	-	57	64.246	ENSBTAG00000054873	-	92	64.246	Bos_taurus
ENSSTOG00000025552	-	94	54.180	ENSBTAG00000011195	-	51	62.963	Bos_taurus
ENSSTOG00000025552	-	93	67.808	ENSBTAG00000005726	HNRNPA2B1	92	71.975	Bos_taurus
ENSSTOG00000025552	-	92	55.521	ENSBTAG00000038680	-	52	64.062	Bos_taurus
ENSSTOG00000025552	-	90	71.429	ENSBTAG00000051697	-	56	85.926	Bos_taurus
ENSSTOG00000025552	-	93	69.333	ENSCJAG00000007908	HNRNPA2B1	92	71.975	Callithrix_jacchus
ENSSTOG00000025552	-	90	70.565	ENSCJAG00000047538	-	59	84.906	Callithrix_jacchus
ENSSTOG00000025552	-	64	76.836	ENSCAFG00000002885	HNRNPA2B1	89	73.507	Canis_familiaris
ENSSTOG00000025552	-	65	73.991	ENSCAFG00020003488	HNRNPA2B1	92	71.975	Canis_lupus_dingo
ENSSTOG00000025552	-	61	64.921	ENSCHIG00000026095	-	57	64.921	Capra_hircus
ENSSTOG00000025552	-	68	54.077	ENSCHIG00000011148	-	56	60.209	Capra_hircus
ENSSTOG00000025552	-	71	61.818	ENSCHIG00000008431	-	75	66.842	Capra_hircus
ENSSTOG00000025552	-	93	55.692	ENSCHIG00000015823	-	57	68.912	Capra_hircus
ENSSTOG00000025552	-	65	73.991	ENSCHIG00000022444	HNRNPA2B1	92	71.975	Capra_hircus
ENSSTOG00000025552	-	91	68.929	ENSTSYG00000008124	HNRNPA2B1	92	71.975	Carlito_syrichta
ENSSTOG00000025552	-	65	73.991	ENSCPOG00000036630	HNRNPA2B1	92	71.975	Cavia_porcellus
ENSSTOG00000025552	-	91	72.695	ENSCCAG00000029074	HNRNPA2B1	92	73.145	Cebus_capucinus
ENSSTOG00000025552	-	91	69.643	ENSCATG00000033325	HNRNPA2B1	92	71.975	Cercocebus_atys
ENSSTOG00000025552	-	90	69.395	ENSCLAG00000014058	HNRNPA2B1	92	71.975	Chinchilla_lanigera
ENSSTOG00000025552	-	64	68.018	ENSCLAG00000016182	-	90	66.238	Chinchilla_lanigera
ENSSTOG00000025552	-	67	71.795	ENSCSAG00000014175	HNRNPA2B1	89	71.746	Chlorocebus_sabaeus
ENSSTOG00000025552	-	61	78.238	ENSCSAG00000005140	-	65	78.238	Chlorocebus_sabaeus
ENSSTOG00000025552	-	65	73.543	ENSCHOG00000013832	HNRNPA2B1	93	70.093	Choloepus_hoffmanni
ENSSTOG00000025552	-	90	69.395	ENSCPBG00000022485	HNRNPA2B1	90	71.656	Chrysemys_picta_bellii
ENSSTOG00000025552	-	93	71.724	ENSCANG00000028734	HNRNPA2B1	92	71.975	Colobus_angolensis_palliatus
ENSSTOG00000025552	-	53	53.049	ENSCGRG00001020496	-	65	53.049	Cricetulus_griseus_chok1gshd
ENSSTOG00000025552	-	90	69.395	ENSCGRG00001022416	-	92	71.975	Cricetulus_griseus_chok1gshd
ENSSTOG00000025552	-	90	69.395	ENSCGRG00000015964	-	89	71.746	Cricetulus_griseus_crigri
ENSSTOG00000025552	-	53	53.049	ENSCGRG00000010922	-	65	53.049	Cricetulus_griseus_crigri
ENSSTOG00000025552	-	65	73.991	ENSDNOG00000046740	-	85	72.293	Dasypus_novemcinctus
ENSSTOG00000025552	-	90	69.395	ENSDORG00000005482	Hnrnpa2b1	92	71.975	Dipodomys_ordii
ENSSTOG00000025552	-	67	71.795	ENSETEG00000018577	HNRNPA2B1	55	80.412	Echinops_telfairi
ENSSTOG00000025552	-	93	54.321	ENSEEUG00000014880	HNRNPA2B1	90	57.778	Erinaceus_europaeus
ENSSTOG00000025552	-	65	73.991	ENSFCAG00000027765	HNRNPA2B1	92	71.975	Felis_catus
ENSSTOG00000025552	-	54	52.874	ENSFCAG00000036293	-	63	52.874	Felis_catus
ENSSTOG00000025552	-	65	72.197	ENSFALG00000009527	HNRNPA2B1	92	70.382	Ficedula_albicollis
ENSSTOG00000025552	-	90	69.395	ENSFDAG00000000793	HNRNPA2B1	92	71.975	Fukomys_damarensis
ENSSTOG00000025552	-	90	68.942	ENSGALG00000011036	HNRNPA2B1	92	71.019	Gallus_gallus
ENSSTOG00000025552	-	90	69.395	ENSGAGG00000006799	HNRNPA2B1	90	71.656	Gopherus_agassizii
ENSSTOG00000025552	-	93	71.724	ENSGGOG00000017072	HNRNPA2B1	92	71.975	Gorilla_gorilla
ENSSTOG00000025552	-	90	69.395	ENSHGLG00000015396	HNRNPA2B1	92	71.975	Heterocephalus_glaber_female
ENSSTOG00000025552	-	65	73.991	ENSHGLG00100004637	HNRNPA2B1	92	71.975	Heterocephalus_glaber_male
ENSSTOG00000025552	-	59	72.340	ENSJJAG00000013880	-	75	72.340	Jaculus_jaculus
ENSSTOG00000025552	-	91	64.516	ENSJJAG00000023126	-	66	73.367	Jaculus_jaculus
ENSSTOG00000025552	-	90	69.395	ENSJJAG00000000423	-	85	71.746	Jaculus_jaculus
ENSSTOG00000025552	-	89	69.565	ENSJJAG00000022256	-	64	75.258	Jaculus_jaculus
ENSSTOG00000025552	-	90	72.263	ENSJJAG00000012306	-	63	81.522	Jaculus_jaculus
ENSSTOG00000025552	-	67	71.795	ENSJJAG00000000278	-	85	71.746	Jaculus_jaculus
ENSSTOG00000025552	-	71	67.873	ENSLACG00000013590	HNRNPA2B1	82	64.979	Latimeria_chalumnae
ENSSTOG00000025552	-	60	80.978	ENSLAFG00000006902	HNRNPA2B1	99	72.826	Loxodonta_africana
ENSSTOG00000025552	-	93	71.724	ENSMFAG00000002536	HNRNPA2B1	92	71.975	Macaca_fascicularis
ENSSTOG00000025552	-	64	77.941	ENSMMUG00000003619	HNRNPA2B1	92	71.975	Macaca_mulatta
ENSSTOG00000025552	-	91	73.050	ENSMNEG00000029148	HNRNPA2B1	92	73.498	Macaca_nemestrina
ENSSTOG00000025552	-	91	69.643	ENSMLEG00000040848	HNRNPA2B1	92	71.975	Mandrillus_leucophaeus
ENSSTOG00000025552	-	65	72.646	ENSMGAG00000010635	HNRNPA2B1	93	71.019	Meleagris_gallopavo
ENSSTOG00000025552	-	90	69.395	ENSMAUG00000005706	-	92	71.975	Mesocricetus_auratus
ENSSTOG00000025552	-	90	65.125	ENSMAUG00000015003	-	62	77.083	Mesocricetus_auratus
ENSSTOG00000025552	-	69	66.216	ENSMICG00000002750	-	75	64.975	Microcebus_murinus
ENSSTOG00000025552	-	93	73.103	ENSMICG00000030570	HNRNPA2B1	92	71.975	Microcebus_murinus
ENSSTOG00000025552	-	95	68.456	ENSMOCG00000021250	-	60	74.742	Microtus_ochrogaster
ENSSTOG00000025552	-	90	69.395	ENSMOCG00000009258	-	92	71.975	Microtus_ochrogaster
ENSSTOG00000025552	-	64	77.401	ENSMODG00000000603	HNRNPA2B1	89	73.881	Monodelphis_domestica
ENSSTOG00000025552	-	90	76.923	MGP_CAROLIEiJ_G0028377	Hnrnpa2b1	92	72.293	Mus_caroli
ENSSTOG00000025552	-	90	69.395	ENSMUSG00000004980	Hnrnpa2b1	92	72.293	Mus_musculus
ENSSTOG00000025552	-	90	71.174	MGP_PahariEiJ_G0022127	Hnrnpa2b1	92	71.975	Mus_pahari
ENSSTOG00000025552	-	90	69.395	MGP_SPRETEiJ_G0029379	Hnrnpa2b1	92	72.293	Mus_spretus
ENSSTOG00000025552	-	67	71.795	ENSMPUG00000004554	HNRNPA2B1	89	71.746	Mustela_putorius_furo
ENSSTOG00000025552	-	90	69.395	ENSMPUG00000017012	-	64	80.829	Mustela_putorius_furo
ENSSTOG00000025552	-	90	71.530	ENSNGAG00000015156	-	92	65.287	Nannospalax_galili
ENSSTOG00000025552	-	58	63.006	ENSNGAG00000017267	-	58	63.006	Nannospalax_galili
ENSSTOG00000025552	-	61	52.717	ENSNGAG00000000224	-	69	52.514	Nannospalax_galili
ENSSTOG00000025552	-	93	71.379	ENSNLEG00000014918	HNRNPA2B1	92	71.975	Nomascus_leucogenys
ENSSTOG00000025552	-	79	68.852	ENSMEUG00000014479	-	62	80.829	Notamacropus_eugenii
ENSSTOG00000025552	-	65	74.439	ENSMEUG00000001084	HNRNPA2B1	93	72.293	Notamacropus_eugenii
ENSSTOG00000025552	-	60	86.986	ENSOPRG00000011698	HNRNPA2B1	67	67.293	Ochotona_princeps
ENSSTOG00000025552	-	88	60.345	ENSODEG00000005746	-	65	71.875	Octodon_degus
ENSSTOG00000025552	-	90	69.176	ENSODEG00000008757	-	66	80.829	Octodon_degus
ENSSTOG00000025552	-	74	74.026	ENSODEG00000018537	-	92	70.382	Octodon_degus
ENSSTOG00000025552	-	90	61.486	ENSODEG00000005464	-	91	59.060	Octodon_degus
ENSSTOG00000025552	-	96	55.049	ENSODEG00000009329	-	59	64.444	Octodon_degus
ENSSTOG00000025552	-	66	64.574	ENSODEG00000000652	-	91	65.372	Octodon_degus
ENSSTOG00000025552	-	65	74.439	ENSOANG00000009159	HNRNPA2B1	80	70.886	Ornithorhynchus_anatinus
ENSSTOG00000025552	-	67	71.368	ENSOCUG00000026859	HNRNPA2B1	89	71.429	Oryctolagus_cuniculus
ENSSTOG00000025552	-	67	71.795	ENSOGAG00000015353	HNRNPA2B1	89	71.746	Otolemur_garnettii
ENSSTOG00000025552	-	92	54.754	ENSOGAG00000031950	-	58	62.360	Otolemur_garnettii
ENSSTOG00000025552	-	95	52.000	ENSOARG00000001157	-	53	67.213	Ovis_aries
ENSSTOG00000025552	-	61	64.062	ENSOARG00000003965	-	56	64.062	Ovis_aries
ENSSTOG00000025552	-	67	71.795	ENSOARG00000010132	HNRNPA2B1	89	71.746	Ovis_aries
ENSSTOG00000025552	-	90	56.494	ENSOARG00000004416	-	54	68.586	Ovis_aries
ENSSTOG00000025552	-	68	52.193	ENSOARG00000013811	-	83	55.440	Ovis_aries
ENSSTOG00000025552	-	80	58.167	ENSOARG00000008025	-	70	66.316	Ovis_aries
ENSSTOG00000025552	-	61	64.583	ENSOARG00000016439	-	59	64.583	Ovis_aries
ENSSTOG00000025552	-	91	69.149	ENSPPAG00000037520	HNRNPA2B1	92	71.975	Pan_paniscus
ENSSTOG00000025552	-	65	73.991	ENSPPRG00000019212	HNRNPA2B1	92	71.975	Panthera_pardus
ENSSTOG00000025552	-	65	73.991	ENSPTIG00000019833	HNRNPA2B1	92	71.975	Panthera_tigris_altaica
ENSSTOG00000025552	-	90	50.903	ENSPTIG00000006805	-	64	64.407	Panthera_tigris_altaica
ENSSTOG00000025552	-	91	69.149	ENSPTRG00000019002	HNRNPA2B1	92	71.975	Pan_troglodytes
ENSSTOG00000025552	-	93	71.724	ENSPANG00000021598	HNRNPA2B1	92	71.975	Papio_anubis
ENSSTOG00000025552	-	90	69.728	ENSPSIG00000002659	HNRNPA2B1	57	80.829	Pelodiscus_sinensis
ENSSTOG00000025552	-	90	69.395	ENSPEMG00000014384	Hnrnpa2b1	92	71.975	Peromyscus_maniculatus_bairdii
ENSSTOG00000025552	-	69	50.463	ENSPMAG00000008270	HNRNPA2B1	76	54.450	Petromyzon_marinus
ENSSTOG00000025552	-	58	71.585	ENSPCIG00000013729	HNRNPA2B1	88	67.730	Phascolarctos_cinereus
ENSSTOG00000025552	-	67	71.795	ENSPPYG00000017715	HNRNPA2B1	89	71.746	Pongo_abelii
ENSSTOG00000025552	-	60	76.042	ENSPCOG00000026324	HNRNPA2B1	83	76.042	Propithecus_coquereli
ENSSTOG00000025552	-	65	73.991	ENSPVAG00000006296	HNRNPA2B1	93	71.975	Pteropus_vampyrus
ENSSTOG00000025552	-	91	69.149	ENSRNOG00000011175	Hnrnpa2b1	89	71.746	Rattus_norvegicus
ENSSTOG00000025552	-	93	62.898	ENSRBIG00000039719	-	90	66.667	Rhinopithecus_bieti
ENSSTOG00000025552	-	93	71.379	ENSRBIG00000015923	-	92	71.975	Rhinopithecus_bieti
ENSSTOG00000025552	-	64	75.490	ENSRROG00000008368	-	59	75.490	Rhinopithecus_roxellana
ENSSTOG00000025552	-	65	73.991	ENSRROG00000020443	-	92	71.975	Rhinopithecus_roxellana
ENSSTOG00000025552	-	91	67.857	ENSSBOG00000005245	HNRNPA2B1	92	71.975	Saimiri_boliviensis_boliviensis
ENSSTOG00000025552	-	90	65.591	ENSSPUG00000015955	HNRNPA2B1	90	71.019	Sphenodon_punctatus
ENSSTOG00000025552	-	75	73.171	ENSSSCG00000012503	-	55	64.249	Sus_scrofa
ENSSTOG00000025552	-	93	67.808	ENSSSCG00000036350	HNRNPA2B1	92	71.975	Sus_scrofa
ENSSTOG00000025552	-	90	63.548	ENSTGUG00000002869	HNRNPA2B1	56	79.275	Taeniopygia_guttata
ENSSTOG00000025552	-	56	72.832	ENSTBEG00000003219	-	70	72.832	Tupaia_belangeri
ENSSTOG00000025552	-	65	73.991	ENSTTRG00000000709	HNRNPA2B1	76	71.338	Tursiops_truncatus
ENSSTOG00000025552	-	90	69.395	ENSUAMG00000025628	HNRNPA2B1	92	71.975	Ursus_americanus
ENSSTOG00000025552	-	93	67.808	ENSUMAG00000001699	HNRNPA2B1	89	71.746	Ursus_maritimus
ENSSTOG00000025552	-	65	70.852	ENSVPAG00000010417	HNRNPA2B1	93	69.182	Vicugna_pacos
ENSSTOG00000025552	-	65	73.991	ENSVVUG00000000484	HNRNPA2B1	92	71.975	Vulpes_vulpes
ENSSTOG00000025552	-	61	73.575	ENSXETG00000012170	hnrnpa2b1	59	73.575	Xenopus_tropicalis