EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000025560 (Gene tree)
Gene ID: 101966456
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 20609 bases
Position: chrJH393427.1:3241472-3262080
Accession: 101966456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017205	zf-RNPHF	PF08080.12	1.6e-22	1	1
ENSSTOP00000017205	RRM_1	PF00076.22	4.4e-29	1	2
ENSSTOP00000017205	RRM_1	PF00076.22	4.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000028013	-	2314	XM_005334401	ENSSTOP00000017205	415 (aa)	XP_005334458	I3MYK9

Gene Model

Click here to download ENSSTOG00000025560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000025560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000025560	-	87	41.598	ENSSTOG00000011569	GRSF1	92	41.598
ENSSTOG00000025560	-	100	89.183	ENSSTOG00000022853	-	100	89.183
ENSSTOG00000025560	-	51	71.901	ENSSTOG00000011676	HNRNPH3	93	58.232
ENSSTOG00000025560	-	100	84.412	ENSSTOG00000023820	-	100	84.412
ENSSTOG00000025560	-	99	75.303	ENSSTOG00000016376	HNRNPH1	97	74.483
ENSSTOG00000025560	-	96	72.902	ENSSTOG00000029028	HNRNPH2	97	72.874

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000025560	-	100	98.313	ENSG00000169813	HNRNPF	100	98.313	Homo_sapiens
ENSSTOG00000025560	-	100	98.554	ENSAMEG00000018983	HNRNPF	100	98.554	Ailuropoda_melanoleuca
ENSSTOG00000025560	-	100	95.181	ENSANAG00000033285	-	100	95.181	Aotus_nancymaae
ENSSTOG00000025560	-	89	82.703	ENSANAG00000033452	-	89	82.703	Aotus_nancymaae
ENSSTOG00000025560	-	100	98.072	ENSBTAG00000008853	HNRNPF	100	98.072	Bos_taurus
ENSSTOG00000025560	-	100	80.430	ENSBTAG00000020513	-	100	80.430	Bos_taurus
ENSSTOG00000025560	-	100	98.313	ENSCJAG00000008291	HNRNPF	100	98.313	Callithrix_jacchus
ENSSTOG00000025560	-	100	98.554	ENSCAFG00000007044	HNRNPF	100	98.554	Canis_familiaris
ENSSTOG00000025560	-	100	98.072	ENSCHIG00000006714	HNRNPF	100	98.072	Capra_hircus
ENSSTOG00000025560	-	97	73.594	ENSCHIG00000022971	-	99	73.594	Capra_hircus
ENSSTOG00000025560	-	100	97.590	ENSTSYG00000030439	-	100	97.590	Carlito_syrichta
ENSSTOG00000025560	-	100	83.413	ENSTSYG00000002112	-	100	83.413	Carlito_syrichta
ENSSTOG00000025560	-	99	99.517	ENSCAPG00000011521	HNRNPF	99	99.517	Cavia_aperea
ENSSTOG00000025560	-	99	99.517	ENSCPOG00000003678	HNRNPF	99	99.517	Cavia_porcellus
ENSSTOG00000025560	-	100	98.072	ENSCCAG00000031457	-	100	98.072	Cebus_capucinus
ENSSTOG00000025560	-	100	78.795	ENSCCAG00000028687	-	100	78.795	Cebus_capucinus
ENSSTOG00000025560	-	99	99.517	ENSCLAG00000005161	HNRNPF	99	99.517	Chinchilla_lanigera
ENSSTOG00000025560	-	100	96.867	ENSCANG00000003086	-	100	96.867	Colobus_angolensis_palliatus
ENSSTOG00000025560	-	100	98.795	ENSCGRG00001016276	Hnrnpf	100	98.795	Cricetulus_griseus_chok1gshd
ENSSTOG00000025560	-	94	74.103	ENSCGRG00001016206	-	88	74.103	Cricetulus_griseus_chok1gshd
ENSSTOG00000025560	-	100	93.976	ENSDNOG00000030849	-	100	93.976	Dasypus_novemcinctus
ENSSTOG00000025560	-	100	97.831	ENSDORG00000024298	-	100	97.831	Dipodomys_ordii
ENSSTOG00000025560	-	100	95.181	ENSDORG00000024936	-	100	95.181	Dipodomys_ordii
ENSSTOG00000025560	-	100	91.084	ENSDORG00000008260	-	100	91.084	Dipodomys_ordii
ENSSTOG00000025560	-	100	89.398	ENSDORG00000005431	-	100	89.398	Dipodomys_ordii
ENSSTOG00000025560	-	100	98.795	ENSEASG00005006903	HNRNPF	100	98.795	Equus_asinus_asinus
ENSSTOG00000025560	-	100	94.940	ENSECAG00000003229	HNRNPF	100	94.940	Equus_caballus
ENSSTOG00000025560	-	100	98.554	ENSFCAG00000028219	-	100	98.554	Felis_catus
ENSSTOG00000025560	-	99	99.517	ENSFDAG00000011431	-	99	99.517	Fukomys_damarensis
ENSSTOG00000025560	-	99	81.884	ENSFDAG00000015308	-	99	81.884	Fukomys_damarensis
ENSSTOG00000025560	-	99	90.076	ENSFDAG00000007858	-	98	90.076	Fukomys_damarensis
ENSSTOG00000025560	-	90	98.133	ENSGGOG00000010867	HNRNPF	93	98.133	Gorilla_gorilla
ENSSTOG00000025560	-	99	99.275	ENSHGLG00000000147	-	99	99.275	Heterocephalus_glaber_female
ENSSTOG00000025560	-	100	95.422	ENSHGLG00000010276	-	100	95.422	Heterocephalus_glaber_female
ENSSTOG00000025560	-	98	94.681	ENSHGLG00000014139	-	97	94.681	Heterocephalus_glaber_female
ENSSTOG00000025560	-	99	88.406	ENSHGLG00000017607	-	100	88.406	Heterocephalus_glaber_female
ENSSTOG00000025560	-	99	98.267	ENSHGLG00100020825	-	100	98.267	Heterocephalus_glaber_male
ENSSTOG00000025560	-	91	87.500	ENSHGLG00100010905	-	97	87.500	Heterocephalus_glaber_male
ENSSTOG00000025560	-	99	90.657	ENSHGLG00100019910	-	100	90.657	Heterocephalus_glaber_male
ENSSTOG00000025560	-	99	94.686	ENSHGLG00100019558	-	100	94.686	Heterocephalus_glaber_male
ENSSTOG00000025560	-	99	95.169	ENSHGLG00100019572	-	99	95.169	Heterocephalus_glaber_male
ENSSTOG00000025560	-	100	73.445	ENSJJAG00000000554	-	100	73.445	Jaculus_jaculus
ENSSTOG00000025560	-	100	64.096	ENSJJAG00000014424	-	100	64.096	Jaculus_jaculus
ENSSTOG00000025560	-	100	87.952	ENSJJAG00000017385	-	100	87.952	Jaculus_jaculus
ENSSTOG00000025560	-	100	81.928	ENSJJAG00000022288	-	100	81.928	Jaculus_jaculus
ENSSTOG00000025560	-	98	94.355	ENSJJAG00000014334	-	99	94.355	Jaculus_jaculus
ENSSTOG00000025560	-	99	96.145	ENSLAFG00000000424	HNRNPF	99	96.145	Loxodonta_africana
ENSSTOG00000025560	-	100	98.313	ENSMFAG00000021184	HNRNPF	100	98.313	Macaca_fascicularis
ENSSTOG00000025560	-	100	98.313	ENSMMUG00000020982	HNRNPF	100	98.313	Macaca_mulatta
ENSSTOG00000025560	-	100	98.313	ENSMLEG00000023515	HNRNPF	100	98.313	Mandrillus_leucophaeus
ENSSTOG00000025560	-	100	98.795	ENSMAUG00000007892	Hnrnpf	100	98.795	Mesocricetus_auratus
ENSSTOG00000025560	-	99	80.285	ENSMICG00000044171	-	99	80.285	Microcebus_murinus
ENSSTOG00000025560	-	99	79.952	ENSMICG00000043739	-	99	79.952	Microcebus_murinus
ENSSTOG00000025560	-	100	97.590	ENSMOCG00000014915	Hnrnpf	100	97.590	Microtus_ochrogaster
ENSSTOG00000025560	-	100	98.795	ENSMUSG00000042079	Hnrnpf	100	98.795	Mus_musculus
ENSSTOG00000025560	-	100	97.590	MGP_PahariEiJ_G0026903	-	100	97.590	Mus_pahari
ENSSTOG00000025560	-	99	98.747	ENSMPUG00000017283	HNRNPF	99	98.747	Mustela_putorius_furo
ENSSTOG00000025560	-	100	96.154	ENSMLUG00000007261	HNRNPF	100	96.154	Myotis_lucifugus
ENSSTOG00000025560	-	100	98.313	ENSNGAG00000010409	-	100	98.313	Nannospalax_galili
ENSSTOG00000025560	-	100	70.361	ENSNGAG00000009482	-	100	70.361	Nannospalax_galili
ENSSTOG00000025560	-	100	80.241	ENSNGAG00000014079	-	100	80.241	Nannospalax_galili
ENSSTOG00000025560	-	100	98.313	ENSNLEG00000019098	HNRNPF	100	98.313	Nomascus_leucogenys
ENSSTOG00000025560	-	99	99.517	ENSODEG00000019266	-	99	99.517	Octodon_degus
ENSSTOG00000025560	-	99	92.476	ENSODEG00000002359	-	99	92.476	Octodon_degus
ENSSTOG00000025560	-	100	99.036	ENSOCUG00000024719	-	100	99.036	Oryctolagus_cuniculus
ENSSTOG00000025560	-	100	93.494	ENSOCUG00000024604	-	100	93.494	Oryctolagus_cuniculus
ENSSTOG00000025560	-	99	91.807	ENSOGAG00000013734	-	99	91.807	Otolemur_garnettii
ENSSTOG00000025560	-	100	93.976	ENSOGAG00000030480	-	100	93.976	Otolemur_garnettii
ENSSTOG00000025560	-	100	80.723	ENSOARG00000016658	-	100	80.723	Ovis_aries
ENSSTOG00000025560	-	99	99.183	ENSOARG00000003995	HNRNPF	92	99.183	Ovis_aries
ENSSTOG00000025560	-	100	98.554	ENSPPRG00000021222	HNRNPF	100	98.554	Panthera_pardus
ENSSTOG00000025560	-	100	98.554	ENSPTIG00000009644	HNRNPF	100	98.554	Panthera_tigris_altaica
ENSSTOG00000025560	-	100	98.313	ENSPTRG00000002446	HNRNPF	100	98.313	Pan_troglodytes
ENSSTOG00000025560	-	100	98.072	ENSPANG00000002212	HNRNPF	100	98.072	Papio_anubis
ENSSTOG00000025560	-	100	98.313	ENSPPYG00000002212	HNRNPF	100	98.313	Pongo_abelii
ENSSTOG00000025560	-	100	95.433	ENSPCAG00000013169	HNRNPF	100	95.433	Procavia_capensis
ENSSTOG00000025560	-	100	97.349	ENSPVAG00000011646	HNRNPF	100	97.349	Pteropus_vampyrus
ENSSTOG00000025560	-	100	98.795	ENSRNOG00000014562	Hnrnpf	100	98.795	Rattus_norvegicus
ENSSTOG00000025560	-	100	98.313	ENSRROG00000001235	HNRNPF	100	98.313	Rhinopithecus_roxellana
ENSSTOG00000025560	-	100	98.313	ENSSBOG00000018361	HNRNPF	100	98.313	Saimiri_boliviensis_boliviensis
ENSSTOG00000025560	-	100	98.313	ENSSARG00000010059	HNRNPF	100	98.313	Sorex_araneus
ENSSTOG00000025560	-	100	58.173	ENSSSCG00000024956	-	96	58.173	Sus_scrofa
ENSSTOG00000025560	-	100	97.831	ENSSSCG00000010203	-	100	97.831	Sus_scrofa
ENSSTOG00000025560	-	98	71.852	ENSTBEG00000016094	HNRNPF	100	71.852	Tupaia_belangeri
ENSSTOG00000025560	-	100	98.554	ENSUAMG00000000455	HNRNPF	100	98.554	Ursus_americanus
ENSSTOG00000025560	-	100	98.554	ENSUMAG00000016485	HNRNPF	100	98.554	Ursus_maritimus
ENSSTOG00000025560	-	100	98.554	ENSVVUG00000021261	HNRNPF	100	98.554	Vulpes_vulpes