EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000026028 (Gene tree)
Gene ID: 101978573
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrJH394317.1:55418-56020
Accession: 101978573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000016273	RRM_1	PF00076.22	4.4e-43	1	2
ENSSTOP00000016273	RRM_1	PF00076.22	4.4e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000020395	-	603	XM_005342696	ENSSTOP00000016273	200 (aa)	XP_005342753	I3N6E0

Gene Model

Click here to download ENSSTOG00000026028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000026028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000026028	-	79	34.167	ENSSTOG00000025095	TIAL1	73	33.333
ENSSTOG00000026028	-	80	44.444	ENSSTOG00000010354	RBM23	59	44.444
ENSSTOG00000026028	-	99	70.558	ENSSTOG00000003739	PABPC1L	60	70.558
ENSSTOG00000026028	-	98	63.959	ENSSTOG00000019472	PABPC4L	98	63.959
ENSSTOG00000026028	-	98	79.592	ENSSTOG00000016395	PABPC3	61	79.592
ENSSTOG00000026028	-	100	100.000	ENSSTOG00000022096	-	100	100.000
ENSSTOG00000026028	-	85	32.895	ENSSTOG00000009130	ELAVL1	94	32.895
ENSSTOG00000026028	-	97	30.303	ENSSTOG00000008309	TIA1	85	30.303
ENSSTOG00000026028	-	100	76.142	ENSSTOG00000010416	PABPC4	60	76.142

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000026028	-	100	98.500	ENSG00000184388	PABPC1L2B	100	98.500	Homo_sapiens
ENSSTOG00000026028	-	100	98.500	ENSG00000186288	PABPC1L2A	100	98.500	Homo_sapiens
ENSSTOG00000026028	-	98	79.592	ENSAPOG00000015105	pabpc1a	58	79.592	Acanthochromis_polyacanthus
ENSSTOG00000026028	-	98	79.082	ENSAPOG00000017776	pabpc1b	61	79.082	Acanthochromis_polyacanthus
ENSSTOG00000026028	-	100	99.000	ENSAMEG00000019441	-	100	99.000	Ailuropoda_melanoleuca
ENSSTOG00000026028	-	98	79.082	ENSACIG00000018366	pabpc1b	60	79.082	Amphilophus_citrinellus
ENSSTOG00000026028	-	98	79.592	ENSACIG00000004685	pabpc1a	58	79.592	Amphilophus_citrinellus
ENSSTOG00000026028	-	98	79.592	ENSAOCG00000019839	pabpc1b	59	79.592	Amphiprion_ocellaris
ENSSTOG00000026028	-	98	79.592	ENSAOCG00000011656	pabpc1a	58	79.592	Amphiprion_ocellaris
ENSSTOG00000026028	-	98	79.592	ENSAPEG00000010435	pabpc1b	59	79.592	Amphiprion_percula
ENSSTOG00000026028	-	98	79.592	ENSAPEG00000006963	pabpc1a	58	79.592	Amphiprion_percula
ENSSTOG00000026028	-	98	79.592	ENSATEG00000012917	pabpc1b	59	79.592	Anabas_testudineus
ENSSTOG00000026028	-	98	79.592	ENSATEG00000024852	pabpc1a	58	79.592	Anabas_testudineus
ENSSTOG00000026028	-	100	98.500	ENSANAG00000019431	-	100	98.500	Aotus_nancymaae
ENSSTOG00000026028	-	100	98.500	ENSANAG00000019429	-	100	98.500	Aotus_nancymaae
ENSSTOG00000026028	-	98	78.571	ENSACLG00000014335	pabpc1b	59	78.571	Astatotilapia_calliptera
ENSSTOG00000026028	-	98	79.592	ENSACLG00000009399	pabpc1a	68	78.333	Astatotilapia_calliptera
ENSSTOG00000026028	-	98	79.082	ENSAMXG00000008599	pabpc1b	59	79.082	Astyanax_mexicanus
ENSSTOG00000026028	-	100	98.500	ENSBTAG00000052491	-	94	98.500	Bos_taurus
ENSSTOG00000026028	-	100	98.000	ENSBTAG00000050902	-	95	98.000	Bos_taurus
ENSSTOG00000026028	-	100	98.500	ENSCJAG00000041326	-	100	98.500	Callithrix_jacchus
ENSSTOG00000026028	-	100	99.000	ENSCAFG00020002052	-	96	99.000	Canis_lupus_dingo
ENSSTOG00000026028	-	100	98.500	ENSCHIG00000006283	-	100	98.500	Capra_hircus
ENSSTOG00000026028	-	100	99.000	ENSCHIG00000011138	-	100	99.000	Capra_hircus
ENSSTOG00000026028	-	100	99.000	ENSTSYG00000001775	-	100	99.000	Carlito_syrichta
ENSSTOG00000026028	-	100	98.500	ENSCPOG00000009525	-	100	98.500	Cavia_porcellus
ENSSTOG00000026028	-	100	98.500	ENSCCAG00000031524	-	100	98.500	Cebus_capucinus
ENSSTOG00000026028	-	100	98.500	ENSCATG00000042826	-	100	98.500	Cercocebus_atys
ENSSTOG00000026028	-	100	98.500	ENSCATG00000043125	-	100	98.500	Cercocebus_atys
ENSSTOG00000026028	-	100	96.500	ENSCLAG00000017409	-	100	96.500	Chinchilla_lanigera
ENSSTOG00000026028	-	100	96.500	ENSCLAG00000017412	-	100	96.500	Chinchilla_lanigera
ENSSTOG00000026028	-	100	98.500	ENSCSAG00000000102	-	100	98.500	Chlorocebus_sabaeus
ENSSTOG00000026028	-	99	93.467	ENSCGRG00001023387	-	98	93.467	Cricetulus_griseus_chok1gshd
ENSSTOG00000026028	-	98	78.571	ENSCSEG00000015241	-	58	78.571	Cynoglossus_semilaevis
ENSSTOG00000026028	-	98	79.592	ENSCSEG00000013324	pabpc1a	58	79.592	Cynoglossus_semilaevis
ENSSTOG00000026028	-	98	80.102	ENSCVAG00000005489	pabpc1b	58	80.102	Cyprinodon_variegatus
ENSSTOG00000026028	-	98	79.592	ENSCVAG00000021872	pabpc1a	58	79.592	Cyprinodon_variegatus
ENSSTOG00000026028	-	98	79.082	ENSDARG00000017219	pabpc1a	58	79.082	Danio_rerio
ENSSTOG00000026028	-	98	78.571	ENSDARG00000021140	pabpc1b	92	86.885	Danio_rerio
ENSSTOG00000026028	-	100	96.500	ENSDNOG00000030926	-	100	96.500	Dasypus_novemcinctus
ENSSTOG00000026028	-	100	97.000	ENSDORG00000011362	-	100	97.000	Dipodomys_ordii
ENSSTOG00000026028	-	100	98.500	ENSEASG00005010399	-	95	98.500	Equus_asinus_asinus
ENSSTOG00000026028	-	100	98.500	ENSECAG00000002620	-	95	98.500	Equus_caballus
ENSSTOG00000026028	-	100	94.000	ENSEEUG00000008203	-	100	94.000	Erinaceus_europaeus
ENSSTOG00000026028	-	98	79.592	ENSELUG00000015062	-	58	79.592	Esox_lucius
ENSSTOG00000026028	-	98	79.082	ENSELUG00000003614	pabpc1a	60	79.082	Esox_lucius
ENSSTOG00000026028	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSSTOG00000026028	-	100	99.000	ENSFCAG00000039701	-	100	99.000	Felis_catus
ENSSTOG00000026028	-	100	98.500	ENSFDAG00000005484	-	100	98.500	Fukomys_damarensis
ENSSTOG00000026028	-	98	79.592	ENSFHEG00000008186	pabpc1b	58	79.592	Fundulus_heteroclitus
ENSSTOG00000026028	-	98	79.592	ENSFHEG00000018979	pabpc1a	58	79.592	Fundulus_heteroclitus
ENSSTOG00000026028	-	98	79.082	ENSGMOG00000013448	pabpc1a	58	79.082	Gadus_morhua
ENSSTOG00000026028	-	98	79.082	ENSGMOG00000002448	-	59	79.082	Gadus_morhua
ENSSTOG00000026028	-	98	79.592	ENSGAFG00000019750	pabpc1a	61	79.592	Gambusia_affinis
ENSSTOG00000026028	-	98	80.102	ENSGAFG00000010193	pabpc1b	60	80.102	Gambusia_affinis
ENSSTOG00000026028	-	98	80.102	ENSGACG00000003771	pabpc1b	65	80.102	Gasterosteus_aculeatus
ENSSTOG00000026028	-	98	79.592	ENSGACG00000003572	pabpc1a	58	79.592	Gasterosteus_aculeatus
ENSSTOG00000026028	-	100	98.500	ENSGGOG00000043933	-	100	98.500	Gorilla_gorilla
ENSSTOG00000026028	-	100	98.500	ENSGGOG00000038606	-	100	98.500	Gorilla_gorilla
ENSSTOG00000026028	-	98	78.571	ENSHBUG00000002075	pabpc1b	61	78.571	Haplochromis_burtoni
ENSSTOG00000026028	-	98	79.592	ENSHBUG00000020487	pabpc1a	68	78.333	Haplochromis_burtoni
ENSSTOG00000026028	-	100	97.500	ENSHGLG00000019762	-	100	97.500	Heterocephalus_glaber_female
ENSSTOG00000026028	-	100	97.500	ENSHGLG00000019668	-	100	97.500	Heterocephalus_glaber_female
ENSSTOG00000026028	-	100	97.500	ENSHGLG00100020854	-	100	97.500	Heterocephalus_glaber_male
ENSSTOG00000026028	-	98	79.592	ENSHCOG00000013502	pabpc1a	58	79.592	Hippocampus_comes
ENSSTOG00000026028	-	95	68.783	ENSHCOG00000003175	pabpc1b	69	68.000	Hippocampus_comes
ENSSTOG00000026028	-	98	79.082	ENSIPUG00000010791	-	61	79.082	Ictalurus_punctatus
ENSSTOG00000026028	-	98	60.309	ENSIPUG00000021244	-	52	60.309	Ictalurus_punctatus
ENSSTOG00000026028	-	98	79.082	ENSIPUG00000008848	pabpc1a	59	79.082	Ictalurus_punctatus
ENSSTOG00000026028	-	100	97.500	ENSJJAG00000007037	-	100	97.500	Jaculus_jaculus
ENSSTOG00000026028	-	98	79.592	ENSKMAG00000000605	pabpc1a	58	79.592	Kryptolebias_marmoratus
ENSSTOG00000026028	-	98	79.592	ENSKMAG00000008049	pabpc1b	63	79.592	Kryptolebias_marmoratus
ENSSTOG00000026028	-	98	79.592	ENSLBEG00000024002	-	58	79.592	Labrus_bergylta
ENSSTOG00000026028	-	98	79.592	ENSLBEG00000026845	pabpc1b	59	79.592	Labrus_bergylta
ENSSTOG00000026028	-	99	96.985	ENSLAFG00000023096	-	99	96.985	Loxodonta_africana
ENSSTOG00000026028	-	100	98.010	ENSMFAG00000028878	-	100	98.010	Macaca_fascicularis
ENSSTOG00000026028	-	100	98.500	ENSMMUG00000039929	-	100	98.500	Macaca_mulatta
ENSSTOG00000026028	-	100	98.500	ENSMMUG00000037681	-	100	98.500	Macaca_mulatta
ENSSTOG00000026028	-	100	98.500	ENSMMUG00000009740	-	100	98.500	Macaca_mulatta
ENSSTOG00000026028	-	100	98.500	ENSMNEG00000037732	-	100	98.500	Macaca_nemestrina
ENSSTOG00000026028	-	100	98.500	ENSMLEG00000027495	-	100	98.500	Mandrillus_leucophaeus
ENSSTOG00000026028	-	98	79.592	ENSMAMG00000014610	pabpc1b	60	79.592	Mastacembelus_armatus
ENSSTOG00000026028	-	98	79.592	ENSMAMG00000004502	-	68	78.333	Mastacembelus_armatus
ENSSTOG00000026028	-	98	79.592	ENSMZEG00005025416	pabpc1a	68	78.333	Maylandia_zebra
ENSSTOG00000026028	-	98	78.571	ENSMZEG00005026745	pabpc1b	59	78.571	Maylandia_zebra
ENSSTOG00000026028	-	100	98.500	ENSMICG00000047642	-	100	98.500	Microcebus_murinus
ENSSTOG00000026028	-	98	79.592	ENSMMOG00000018044	pabpc1a	68	78.333	Mola_mola
ENSSTOG00000026028	-	98	79.592	ENSMMOG00000018009	pabpc1b	63	79.592	Mola_mola
ENSSTOG00000026028	-	98	66.667	ENSMODG00000015024	-	57	66.667	Monodelphis_domestica
ENSSTOG00000026028	-	98	73.469	ENSMODG00000013156	-	58	73.469	Monodelphis_domestica
ENSSTOG00000026028	-	98	79.592	ENSMALG00000006066	pabpc1b	64	79.592	Monopterus_albus
ENSSTOG00000026028	-	98	79.592	ENSMALG00000013020	-	62	79.592	Monopterus_albus
ENSSTOG00000026028	-	100	97.500	ENSNGAG00000012688	-	100	97.500	Nannospalax_galili
ENSSTOG00000026028	-	98	79.592	ENSNBRG00000003068	-	68	78.333	Neolamprologus_brichardi
ENSSTOG00000026028	-	98	78.571	ENSNBRG00000013737	pabpc1b	63	78.571	Neolamprologus_brichardi
ENSSTOG00000026028	-	100	98.500	ENSNLEG00000018128	-	100	98.500	Nomascus_leucogenys
ENSSTOG00000026028	-	100	96.000	ENSODEG00000018540	-	100	96.000	Octodon_degus
ENSSTOG00000026028	-	98	78.571	ENSONIG00000002717	pabpc1b	59	78.571	Oreochromis_niloticus
ENSSTOG00000026028	-	98	79.592	ENSONIG00000006871	-	58	79.592	Oreochromis_niloticus
ENSSTOG00000026028	-	100	99.000	ENSOCUG00000002565	-	100	99.000	Oryctolagus_cuniculus
ENSSTOG00000026028	-	98	79.592	ENSORLG00000002691	pabpc1a	68	78.333	Oryzias_latipes
ENSSTOG00000026028	-	98	76.531	ENSORLG00000003008	-	62	76.531	Oryzias_latipes
ENSSTOG00000026028	-	98	76.531	ENSORLG00020022259	-	62	76.531	Oryzias_latipes_hni
ENSSTOG00000026028	-	98	79.592	ENSORLG00020022398	pabpc1a	58	79.592	Oryzias_latipes_hni
ENSSTOG00000026028	-	98	79.592	ENSORLG00015013633	pabpc1	58	79.592	Oryzias_latipes_hsok
ENSSTOG00000026028	-	98	76.531	ENSORLG00015010932	-	62	76.531	Oryzias_latipes_hsok
ENSSTOG00000026028	-	98	79.592	ENSOMEG00000020219	pabpc1a	58	79.592	Oryzias_melastigma
ENSSTOG00000026028	-	98	76.111	ENSOMEG00000013627	pabpc1b	67	76.111	Oryzias_melastigma
ENSSTOG00000026028	-	100	98.500	ENSOGAG00000029513	-	100	98.500	Otolemur_garnettii
ENSSTOG00000026028	-	100	98.500	ENSOGAG00000026047	-	100	98.500	Otolemur_garnettii
ENSSTOG00000026028	-	100	98.500	ENSOARG00000005943	-	100	98.500	Ovis_aries
ENSSTOG00000026028	-	100	98.500	ENSPPAG00000012920	-	100	98.500	Pan_paniscus
ENSSTOG00000026028	-	100	99.000	ENSPPRG00000011809	-	100	99.000	Panthera_pardus
ENSSTOG00000026028	-	100	99.000	ENSPPRG00000011804	-	100	99.000	Panthera_pardus
ENSSTOG00000026028	-	100	98.500	ENSPTRG00000028252	-	100	98.500	Pan_troglodytes
ENSSTOG00000026028	-	100	98.500	ENSPANG00000011549	-	100	98.500	Papio_anubis
ENSSTOG00000026028	-	98	79.082	ENSPKIG00000005676	pabpc1b	59	79.082	Paramormyrops_kingsleyae
ENSSTOG00000026028	-	98	78.571	ENSPMGG00000022487	pabpc1a	76	78.571	Periophthalmus_magnuspinnatus
ENSSTOG00000026028	-	98	80.102	ENSPMGG00000023134	-	79	80.102	Periophthalmus_magnuspinnatus
ENSSTOG00000026028	-	98	79.592	ENSPFOG00000010815	pabpc1a	57	79.592	Poecilia_formosa
ENSSTOG00000026028	-	98	79.592	ENSPFOG00000005917	pabpc1b	58	79.592	Poecilia_formosa
ENSSTOG00000026028	-	98	80.102	ENSPLAG00000001388	pabpc1b	58	80.102	Poecilia_latipinna
ENSSTOG00000026028	-	98	79.592	ENSPLAG00000004114	pabpc1a	58	79.592	Poecilia_latipinna
ENSSTOG00000026028	-	98	79.592	ENSPMEG00000001334	pabpc1a	58	79.592	Poecilia_mexicana
ENSSTOG00000026028	-	98	79.592	ENSPMEG00000014399	pabpc1b	58	79.592	Poecilia_mexicana
ENSSTOG00000026028	-	98	80.102	ENSPREG00000010911	pabpc1b	60	80.102	Poecilia_reticulata
ENSSTOG00000026028	-	98	79.592	ENSPREG00000019595	pabpc1a	92	86.885	Poecilia_reticulata
ENSSTOG00000026028	-	100	98.500	ENSPPYG00000020468	-	100	98.500	Pongo_abelii
ENSSTOG00000026028	-	100	98.000	ENSPCAG00000005308	-	100	98.000	Procavia_capensis
ENSSTOG00000026028	-	100	99.000	ENSPCOG00000026349	-	100	99.000	Propithecus_coquereli
ENSSTOG00000026028	-	100	96.000	ENSPVAG00000016117	-	100	96.000	Pteropus_vampyrus
ENSSTOG00000026028	-	98	78.571	ENSPNYG00000012578	pabpc1b	61	78.571	Pundamilia_nyererei
ENSSTOG00000026028	-	98	79.592	ENSPNYG00000005192	pabpc1a	61	78.333	Pundamilia_nyererei
ENSSTOG00000026028	-	98	78.061	ENSPNAG00000028408	pabpc1a	65	78.061	Pygocentrus_nattereri
ENSSTOG00000026028	-	98	79.592	ENSPNAG00000024626	pabpc1b	58	79.592	Pygocentrus_nattereri
ENSSTOG00000026028	-	100	98.500	ENSRBIG00000027173	-	100	98.500	Rhinopithecus_bieti
ENSSTOG00000026028	-	99	78.173	ENSRBIG00000028738	-	69	78.173	Rhinopithecus_bieti
ENSSTOG00000026028	-	100	98.500	ENSRROG00000017404	-	100	98.500	Rhinopithecus_roxellana
ENSSTOG00000026028	-	98	68.878	ENSSHAG00000000511	-	59	68.878	Sarcophilus_harrisii
ENSSTOG00000026028	-	98	79.592	ENSSFOG00015006662	pabpc1a	59	79.592	Scleropages_formosus
ENSSTOG00000026028	-	98	79.592	ENSSFOG00015002752	-	58	79.592	Scleropages_formosus
ENSSTOG00000026028	-	87	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSSTOG00000026028	-	98	79.592	ENSSMAG00000010803	pabpc1a	58	79.592	Scophthalmus_maximus
ENSSTOG00000026028	-	98	79.592	ENSSMAG00000006869	pabpc1b	59	79.592	Scophthalmus_maximus
ENSSTOG00000026028	-	98	79.082	ENSSDUG00000011965	pabpc1b	58	79.082	Seriola_dumerili
ENSSTOG00000026028	-	98	79.592	ENSSDUG00000006675	pabpc1a	58	79.592	Seriola_dumerili
ENSSTOG00000026028	-	98	79.592	ENSSLDG00000011661	pabpc1a	58	79.592	Seriola_lalandi_dorsalis
ENSSTOG00000026028	-	98	79.082	ENSSLDG00000014156	pabpc1b	60	79.082	Seriola_lalandi_dorsalis
ENSSTOG00000026028	-	98	79.082	ENSSPAG00000019265	pabpc1b	65	79.082	Stegastes_partitus
ENSSTOG00000026028	-	98	79.592	ENSSPAG00000014453	-	58	79.592	Stegastes_partitus
ENSSTOG00000026028	-	100	99.000	ENSSSCG00000032167	-	100	99.000	Sus_scrofa
ENSSTOG00000026028	-	100	99.000	ENSSSCG00000036336	-	100	99.000	Sus_scrofa
ENSSTOG00000026028	-	98	79.592	ENSTRUG00000011577	-	58	79.592	Takifugu_rubripes
ENSSTOG00000026028	-	98	80.612	ENSTRUG00000003767	-	59	80.612	Takifugu_rubripes
ENSSTOG00000026028	-	98	75.248	ENSTNIG00000013307	pabpc1a	58	75.248	Tetraodon_nigroviridis
ENSSTOG00000026028	-	98	81.122	ENSTNIG00000009153	pabpc1b	58	81.122	Tetraodon_nigroviridis
ENSSTOG00000026028	-	100	99.000	ENSTTRG00000013181	-	100	99.000	Tursiops_truncatus
ENSSTOG00000026028	-	100	99.000	ENSUAMG00000008089	-	100	99.000	Ursus_americanus
ENSSTOG00000026028	-	99	58.376	ENSUMAG00000023926	-	88	57.868	Ursus_maritimus
ENSSTOG00000026028	-	100	99.000	ENSUMAG00000003364	-	100	99.000	Ursus_maritimus
ENSSTOG00000026028	-	100	98.500	ENSVVUG00000015892	-	97	98.500	Vulpes_vulpes
ENSSTOG00000026028	-	98	79.592	ENSXCOG00000017066	pabpc1a	61	79.592	Xiphophorus_couchianus
ENSSTOG00000026028	-	98	80.102	ENSXCOG00000019901	pabpc1b	60	80.102	Xiphophorus_couchianus
ENSSTOG00000026028	-	98	79.592	ENSXMAG00000002555	pabpc1a	60	79.592	Xiphophorus_maculatus
ENSSTOG00000026028	-	98	80.102	ENSXMAG00000003753	pabpc1b	89	80.102	Xiphophorus_maculatus