EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000027130 (Gene tree)
Gene ID: 101960494
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 9939 bases
Position: chrJH393365.1:6773045-6782983
Accession: 27329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000022157	R3H	PF01424.22	1.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000029895	R3HCC1-201	4992	XM_005329341	ENSSTOP00000022157	466 (aa)	-	I3NCR0

Gene Model

Click here to download ENSSTOG00000027130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000027130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000027130	R3HCC1	99	72.318	ENSG00000104679	R3HCC1	100	95.349	Homo_sapiens
ENSSTOG00000027130	R3HCC1	61	46.000	ENSAPOG00000003616	r3hcc1	65	46.000	Acanthochromis_polyacanthus
ENSSTOG00000027130	R3HCC1	96	68.233	ENSAMEG00000002963	R3HCC1	91	68.243	Ailuropoda_melanoleuca
ENSSTOG00000027130	R3HCC1	63	41.176	ENSACIG00000017144	r3hcc1	98	36.364	Amphilophus_citrinellus
ENSSTOG00000027130	R3HCC1	57	49.275	ENSAOCG00000003945	r3hcc1	69	47.436	Amphiprion_ocellaris
ENSSTOG00000027130	R3HCC1	57	49.275	ENSAPEG00000003613	r3hcc1	69	46.795	Amphiprion_percula
ENSSTOG00000027130	R3HCC1	57	46.575	ENSATEG00000023860	r3hcc1	73	46.541	Anabas_testudineus
ENSSTOG00000027130	R3HCC1	92	47.273	ENSACAG00000016627	R3HCC1	96	46.697	Anolis_carolinensis
ENSSTOG00000027130	R3HCC1	97	72.284	ENSANAG00000036169	R3HCC1	95	72.483	Aotus_nancymaae
ENSSTOG00000027130	R3HCC1	96	66.147	ENSBTAG00000025830	R3HCC1	96	66.292	Bos_taurus
ENSSTOG00000027130	R3HCC1	99	69.957	ENSCJAG00000020118	R3HCC1	100	62.697	Callithrix_jacchus
ENSSTOG00000027130	R3HCC1	96	66.295	ENSCAFG00000009210	R3HCC1	95	66.441	Canis_familiaris
ENSSTOG00000027130	R3HCC1	84	61.480	ENSCAFG00020012870	R3HCC1	86	62.466	Canis_lupus_dingo
ENSSTOG00000027130	R3HCC1	95	62.009	ENSCHIG00000009107	R3HCC1	99	62.009	Capra_hircus
ENSSTOG00000027130	R3HCC1	97	71.397	ENSTSYG00000000511	R3HCC1	78	71.365	Carlito_syrichta
ENSSTOG00000027130	R3HCC1	85	51.936	ENSCAPG00000015813	R3HCC1	100	51.936	Cavia_aperea
ENSSTOG00000027130	R3HCC1	94	60.417	ENSCPOG00000009696	R3HCC1	100	60.417	Cavia_porcellus
ENSSTOG00000027130	R3HCC1	96	71.365	ENSCCAG00000037811	R3HCC1	100	63.371	Cebus_capucinus
ENSSTOG00000027130	R3HCC1	99	72.103	ENSCATG00000032971	R3HCC1	100	65.169	Cercocebus_atys
ENSSTOG00000027130	R3HCC1	95	67.720	ENSCLAG00000015556	R3HCC1	83	67.955	Chinchilla_lanigera
ENSSTOG00000027130	R3HCC1	99	71.674	ENSCSAG00000016250	R3HCC1	92	72.260	Chlorocebus_sabaeus
ENSSTOG00000027130	R3HCC1	94	66.213	ENSCHOG00000000396	R3HCC1	95	66.213	Choloepus_hoffmanni
ENSSTOG00000027130	R3HCC1	99	71.459	ENSCANG00000029441	R3HCC1	100	64.944	Colobus_angolensis_palliatus
ENSSTOG00000027130	R3HCC1	79	76.471	ENSCGRG00001014977	R3hcc1	77	76.471	Cricetulus_griseus_chok1gshd
ENSSTOG00000027130	R3HCC1	79	76.471	ENSCGRG00000004454	R3hcc1	77	76.471	Cricetulus_griseus_crigri
ENSSTOG00000027130	R3HCC1	76	46.914	ENSCSEG00000005748	r3hcc1	86	46.341	Cynoglossus_semilaevis
ENSSTOG00000027130	R3HCC1	56	40.476	ENSCVAG00000002640	r3hcc1	72	40.476	Cyprinodon_variegatus
ENSSTOG00000027130	R3HCC1	65	50.345	ENSDARG00000099593	r3hcc1	77	50.345	Danio_rerio
ENSSTOG00000027130	R3HCC1	97	68.071	ENSDNOG00000007168	R3HCC1	92	68.233	Dasypus_novemcinctus
ENSSTOG00000027130	R3HCC1	83	82.353	ENSDORG00000026365	R3hcc1	81	82.353	Dipodomys_ordii
ENSSTOG00000027130	R3HCC1	95	58.652	ENSETEG00000001147	R3HCC1	97	58.652	Echinops_telfairi
ENSSTOG00000027130	R3HCC1	95	69.663	ENSEASG00005018782	R3HCC1	80	69.595	Equus_asinus_asinus
ENSSTOG00000027130	R3HCC1	95	69.438	ENSECAG00000025013	R3HCC1	97	69.369	Equus_caballus
ENSSTOG00000027130	R3HCC1	98	62.664	ENSEEUG00000011918	R3HCC1	97	62.864	Erinaceus_europaeus
ENSSTOG00000027130	R3HCC1	61	49.080	ENSELUG00000023650	r3hcc1	70	49.000	Esox_lucius
ENSSTOG00000027130	R3HCC1	98	68.341	ENSFCAG00000012395	R3HCC1	96	68.849	Felis_catus
ENSSTOG00000027130	R3HCC1	67	52.830	ENSFALG00000001646	R3HCC1	60	52.830	Ficedula_albicollis
ENSSTOG00000027130	R3HCC1	95	62.821	ENSFDAG00000001572	R3HCC1	99	62.821	Fukomys_damarensis
ENSSTOG00000027130	R3HCC1	60	38.356	ENSGMOG00000017590	-	82	36.296	Gadus_morhua
ENSSTOG00000027130	R3HCC1	66	48.276	ENSGAFG00000008747	-	66	46.203	Gambusia_affinis
ENSSTOG00000027130	R3HCC1	67	47.682	ENSGACG00000008447	r3hcc1	70	47.682	Gasterosteus_aculeatus
ENSSTOG00000027130	R3HCC1	99	72.318	ENSGGOG00000013817	R3HCC1	100	73.034	Gorilla_gorilla
ENSSTOG00000027130	R3HCC1	86	80.255	ENSHGLG00000010517	R3HCC1	96	68.008	Heterocephalus_glaber_female
ENSSTOG00000027130	R3HCC1	86	80.255	ENSHGLG00100006388	R3HCC1	96	68.008	Heterocephalus_glaber_male
ENSSTOG00000027130	R3HCC1	64	44.444	ENSHCOG00000011745	r3hcc1	73	44.025	Hippocampus_comes
ENSSTOG00000027130	R3HCC1	65	47.468	ENSIPUG00000024504	r3hcc1	87	47.468	Ictalurus_punctatus
ENSSTOG00000027130	R3HCC1	83	81.325	ENSJJAG00000013075	R3hcc1	85	81.325	Jaculus_jaculus
ENSSTOG00000027130	R3HCC1	55	47.059	ENSKMAG00000000286	r3hcc1	70	44.156	Kryptolebias_marmoratus
ENSSTOG00000027130	R3HCC1	76	54.054	ENSLACG00000011894	R3HCC1	83	54.054	Latimeria_chalumnae
ENSSTOG00000027130	R3HCC1	64	48.684	ENSLOCG00000015442	r3hcc1	72	49.306	Lepisosteus_oculatus
ENSSTOG00000027130	R3HCC1	86	78.846	ENSLAFG00000016137	R3HCC1	76	78.846	Loxodonta_africana
ENSSTOG00000027130	R3HCC1	99	71.888	ENSMFAG00000032894	R3HCC1	100	64.944	Macaca_fascicularis
ENSSTOG00000027130	R3HCC1	99	72.103	ENSMMUG00000016655	R3HCC1	100	65.169	Macaca_mulatta
ENSSTOG00000027130	R3HCC1	99	71.674	ENSMNEG00000043283	R3HCC1	100	64.719	Macaca_nemestrina
ENSSTOG00000027130	R3HCC1	99	72.318	ENSMLEG00000030147	R3HCC1	100	65.393	Mandrillus_leucophaeus
ENSSTOG00000027130	R3HCC1	63	47.170	ENSMAMG00000018146	r3hcc1	72	47.170	Mastacembelus_armatus
ENSSTOG00000027130	R3HCC1	93	45.067	ENSMGAG00000001356	R3HCC1	90	45.169	Meleagris_gallopavo
ENSSTOG00000027130	R3HCC1	81	78.205	ENSMAUG00000016096	R3hcc1	82	74.699	Mesocricetus_auratus
ENSSTOG00000027130	R3HCC1	99	70.130	ENSMICG00000011146	R3HCC1	94	71.588	Microcebus_murinus
ENSSTOG00000027130	R3HCC1	77	80.864	ENSMOCG00000018508	R3hcc1	75	80.606	Microtus_ochrogaster
ENSSTOG00000027130	R3HCC1	79	71.895	ENSMODG00000016809	-	92	71.069	Monodelphis_domestica
ENSSTOG00000027130	R3HCC1	62	50.746	ENSMALG00000000731	r3hcc1	70	50.746	Monopterus_albus
ENSSTOG00000027130	R3HCC1	78	78.395	MGP_CAROLIEiJ_G0019467	R3hcc1	76	77.576	Mus_caroli
ENSSTOG00000027130	R3HCC1	78	78.049	ENSMUSG00000034194	R3hcc1	75	78.049	Mus_musculus
ENSSTOG00000027130	R3HCC1	79	75.301	MGP_PahariEiJ_G0030484	R3hcc1	75	75.301	Mus_pahari
ENSSTOG00000027130	R3HCC1	78	78.049	MGP_SPRETEiJ_G0020359	R3hcc1	75	78.049	Mus_spretus
ENSSTOG00000027130	R3HCC1	96	66.890	ENSMPUG00000003457	R3HCC1	87	67.117	Mustela_putorius_furo
ENSSTOG00000027130	R3HCC1	96	65.708	ENSMLUG00000000266	R3HCC1	92	65.924	Myotis_lucifugus
ENSSTOG00000027130	R3HCC1	82	82.609	ENSNGAG00000016747	R3hcc1	85	81.928	Nannospalax_galili
ENSSTOG00000027130	R3HCC1	96	66.667	ENSNLEG00000015944	R3HCC1	92	66.667	Nomascus_leucogenys
ENSSTOG00000027130	R3HCC1	95	54.084	ENSMEUG00000010587	R3HCC1	98	54.222	Notamacropus_eugenii
ENSSTOG00000027130	R3HCC1	85	78.035	ENSOPRG00000013390	R3HCC1	96	63.920	Ochotona_princeps
ENSSTOG00000027130	R3HCC1	93	61.229	ENSODEG00000007529	R3HCC1	99	61.378	Octodon_degus
ENSSTOG00000027130	R3HCC1	82	70.968	ENSOANG00000013877	R3HCC1	97	52.863	Ornithorhynchus_anatinus
ENSSTOG00000027130	R3HCC1	96	63.920	ENSOCUG00000023554	R3HCC1	86	63.920	Oryctolagus_cuniculus
ENSSTOG00000027130	R3HCC1	64	43.226	ENSORLG00000016816	r3hcc1	80	43.226	Oryzias_latipes
ENSSTOG00000027130	R3HCC1	64	43.226	ENSORLG00020012005	r3hcc1	80	43.226	Oryzias_latipes_hni
ENSSTOG00000027130	R3HCC1	59	43.226	ENSORLG00015007018	r3hcc1	74	43.226	Oryzias_latipes_hsok
ENSSTOG00000027130	R3HCC1	59	40.876	ENSOMEG00000000816	r3hcc1	72	40.876	Oryzias_melastigma
ENSSTOG00000027130	R3HCC1	83	82.456	ENSOGAG00000001291	R3HCC1	92	67.338	Otolemur_garnettii
ENSSTOG00000027130	R3HCC1	95	65.766	ENSOARG00000010146	R3HCC1	96	65.909	Ovis_aries
ENSSTOG00000027130	R3HCC1	99	71.888	ENSPPAG00000033165	R3HCC1	100	72.360	Pan_paniscus
ENSSTOG00000027130	R3HCC1	95	68.539	ENSPPRG00000002522	R3HCC1	100	68.539	Panthera_pardus
ENSSTOG00000027130	R3HCC1	88	66.098	ENSPTIG00000011230	R3HCC1	95	65.926	Panthera_tigris_altaica
ENSSTOG00000027130	R3HCC1	99	72.103	ENSPTRG00000020076	R3HCC1	100	66.517	Pan_troglodytes
ENSSTOG00000027130	R3HCC1	99	72.103	ENSPANG00000000453	R3HCC1	100	65.169	Papio_anubis
ENSSTOG00000027130	R3HCC1	61	51.007	ENSPKIG00000014426	-	78	51.007	Paramormyrops_kingsleyae
ENSSTOG00000027130	R3HCC1	61	51.007	ENSPKIG00000020397	-	72	51.007	Paramormyrops_kingsleyae
ENSSTOG00000027130	R3HCC1	72	61.875	ENSPSIG00000017664	R3HCC1	78	61.875	Pelodiscus_sinensis
ENSSTOG00000027130	R3HCC1	78	79.641	ENSPEMG00000007118	R3hcc1	76	79.641	Peromyscus_maniculatus_bairdii
ENSSTOG00000027130	R3HCC1	88	49.292	ENSPCIG00000022718	-	85	49.645	Phascolarctos_cinereus
ENSSTOG00000027130	R3HCC1	67	45.270	ENSPFOG00000022301	r3hcc1	65	45.270	Poecilia_formosa
ENSSTOG00000027130	R3HCC1	65	46.809	ENSPLAG00000010794	r3hcc1	65	45.270	Poecilia_latipinna
ENSSTOG00000027130	R3HCC1	67	45.270	ENSPMEG00000022515	r3hcc1	65	45.270	Poecilia_mexicana
ENSSTOG00000027130	R3HCC1	65	46.099	ENSPREG00000000713	r3hcc1	66	43.791	Poecilia_reticulata
ENSSTOG00000027130	R3HCC1	88	70.560	ENSPPYG00000018436	R3HCC1	100	70.560	Pongo_abelii
ENSSTOG00000027130	R3HCC1	74	78.710	ENSPCAG00000012229	R3HCC1	73	78.710	Procavia_capensis
ENSSTOG00000027130	R3HCC1	95	69.888	ENSPCOG00000027554	R3HCC1	100	69.888	Propithecus_coquereli
ENSSTOG00000027130	R3HCC1	99	65.948	ENSPVAG00000009829	R3HCC1	96	66.964	Pteropus_vampyrus
ENSSTOG00000027130	R3HCC1	61	49.306	ENSPNAG00000023875	r3hcc1	63	56.962	Pygocentrus_nattereri
ENSSTOG00000027130	R3HCC1	85	77.778	ENSRNOG00000016777	AABR07018321.1	67	77.778	Rattus_norvegicus
ENSSTOG00000027130	R3HCC1	95	72.584	ENSRBIG00000028045	R3HCC1	100	72.584	Rhinopithecus_bieti
ENSSTOG00000027130	R3HCC1	99	71.888	ENSRROG00000031126	R3HCC1	100	65.393	Rhinopithecus_roxellana
ENSSTOG00000027130	R3HCC1	95	70.562	ENSSBOG00000022590	R3HCC1	100	70.562	Saimiri_boliviensis_boliviensis
ENSSTOG00000027130	R3HCC1	59	70.130	ENSSHAG00000016526	-	60	71.053	Sarcophilus_harrisii
ENSSTOG00000027130	R3HCC1	58	51.316	ENSSFOG00015013507	r3hcc1	71	51.316	Scleropages_formosus
ENSSTOG00000027130	R3HCC1	75	48.684	ENSSMAG00000008647	r3hcc1	84	48.052	Scophthalmus_maximus
ENSSTOG00000027130	R3HCC1	63	50.382	ENSSDUG00000022786	r3hcc1	75	47.651	Seriola_dumerili
ENSSTOG00000027130	R3HCC1	63	49.618	ENSSLDG00000019031	r3hcc1	72	46.980	Seriola_lalandi_dorsalis
ENSSTOG00000027130	R3HCC1	61	47.403	ENSSPAG00000013497	r3hcc1	69	47.403	Stegastes_partitus
ENSSTOG00000027130	R3HCC1	96	68.527	ENSSSCG00000039915	-	93	68.694	Sus_scrofa
ENSSTOG00000027130	R3HCC1	97	61.197	ENSSSCG00000037347	-	91	61.298	Sus_scrofa
ENSSTOG00000027130	R3HCC1	63	42.236	ENSTRUG00000015880	r3hcc1	74	42.236	Takifugu_rubripes
ENSSTOG00000027130	R3HCC1	95	62.108	ENSTTRG00000012247	R3HCC1	96	62.108	Tursiops_truncatus
ENSSTOG00000027130	R3HCC1	94	66.213	ENSUAMG00000007344	R3HCC1	99	66.213	Ursus_americanus
ENSSTOG00000027130	R3HCC1	96	67.188	ENSVVUG00000005056	R3HCC1	95	67.342	Vulpes_vulpes
ENSSTOG00000027130	R3HCC1	59	46.259	ENSXCOG00000017626	r3hcc1	62	44.805	Xiphophorus_couchianus
ENSSTOG00000027130	R3HCC1	66	46.575	ENSXMAG00000018375	r3hcc1	66	45.098	Xiphophorus_maculatus