EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000027152 (Gene tree)
Gene ID: -
Gene Symbol: RTL3
Alias: FLJ38865|Mar3|Mart3|SIRH9|ZCCHC5|ZHC5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1740 bases
Position: chrJH393357.1:731006-732745
Accession: 22997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000020761	zf-CCHC	PF00098.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000027386	RTL3-201	1590	XM_005328864	ENSSTOP00000020761	529 (aa)	-	I3N8R5

Gene Model

Click here to download ENSSTOG00000027152's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000027152's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000027152	RTL3	99	55.121	ENSG00000179300	RTL3	99	59.363	Homo_sapiens
ENSSTOG00000027152	RTL3	100	53.690	ENSTSYG00000008776	RTL3	100	57.435	Carlito_syrichta
ENSSTOG00000027152	RTL3	100	56.028	ENSCGRG00001015952	Rtl3	100	56.028	Cricetulus_griseus_chok1gshd
ENSSTOG00000027152	RTL3	100	61.002	ENSDORG00000029995	Rtl3	100	62.202	Dipodomys_ordii
ENSSTOG00000027152	RTL3	100	61.940	ENSECAG00000029496	RTL3	100	61.940	Equus_caballus
ENSSTOG00000027152	RTL3	100	58.467	ENSJJAG00000014790	-	100	60.109	Jaculus_jaculus
ENSSTOG00000027152	RTL3	100	52.991	ENSMAUG00000011823	Rtl3	100	56.080	Mesocricetus_auratus
ENSSTOG00000027152	RTL3	100	59.889	ENSMICG00000004901	RTL3	100	60.182	Microcebus_murinus
ENSSTOG00000027152	RTL3	100	54.690	ENSMOCG00000017247	Rtl3	100	54.690	Microtus_ochrogaster
ENSSTOG00000027152	RTL3	100	56.743	MGP_CAROLIEiJ_G0033333	Rtl3	100	56.743	Mus_caroli
ENSSTOG00000027152	RTL3	100	55.923	ENSMUSG00000047686	Rtl3	100	55.923	Mus_musculus
ENSSTOG00000027152	RTL3	100	55.245	MGP_PahariEiJ_G0031869	Rtl3	100	55.245	Mus_pahari
ENSSTOG00000027152	RTL3	100	56.743	MGP_SPRETEiJ_G0034497	Rtl3	100	56.098	Mus_spretus
ENSSTOG00000027152	RTL3	100	56.926	ENSNGAG00000002851	Rtl3	100	56.131	Nannospalax_galili
ENSSTOG00000027152	RTL3	100	61.526	ENSOCUG00000025689	RTL3	100	64.437	Oryctolagus_cuniculus
ENSSTOG00000027152	RTL3	100	65.299	ENSPCOG00000016711	RTL3	100	65.299	Propithecus_coquereli
ENSSTOG00000027152	RTL3	100	56.283	ENSRNOG00000002429	Rtl3	100	56.283	Rattus_norvegicus
ENSSTOG00000027152	RTL3	100	59.142	ENSTBEG00000002464	RTL3	100	59.142	Tupaia_belangeri