EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000027559 (Gene tree)
Gene ID: 101966959
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 9745 bases
Position: chrJH393547.1:129724-139468
Accession: 101966959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000018970	B3_4	PF03483.17	2.9e-09	1	1
ENSSTOP00000024159	B3_4	PF03483.17	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000024714	LRRC47-202	1737	-	ENSSTOP00000018970	578 (aa)	-	I3N3M4
ENSSTOT00000036098	LRRC47-201	3743	XM_005339214	ENSSTOP00000024159	586 (aa)	XP_005339271	A0A287CS97

Gene Model

Click here to download ENSSTOG00000027559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000027559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000027559	LRRC47	100	91.312	ENSG00000130764	LRRC47	100	90.460	Homo_sapiens
ENSSTOG00000027559	LRRC47	99	54.593	ENSAPOG00000019553	lrrc47	99	54.483	Acanthochromis_polyacanthus
ENSSTOG00000027559	LRRC47	79	76.957	ENSAMEG00000009152	LRRC47	100	76.957	Ailuropoda_melanoleuca
ENSSTOG00000027559	LRRC47	66	68.930	ENSAPLG00000003167	LRRC47	100	67.539	Anas_platyrhynchos
ENSSTOG00000027559	LRRC47	66	66.146	ENSACAG00000008267	LRRC47	99	66.667	Anolis_carolinensis
ENSSTOG00000027559	LRRC47	100	89.438	ENSANAG00000025576	LRRC47	100	88.586	Aotus_nancymaae
ENSSTOG00000027559	LRRC47	99	85.069	ENSBTAG00000004738	LRRC47	99	84.974	Bos_taurus
ENSSTOG00000027559	LRRC47	96	83.036	ENSCAFG00000019492	LRRC47	99	82.788	Canis_familiaris
ENSSTOG00000027559	LRRC47	100	83.106	ENSCAFG00020009667	LRRC47	100	82.990	Canis_lupus_dingo
ENSSTOG00000027559	LRRC47	99	85.243	ENSCHIG00000022607	LRRC47	99	84.483	Capra_hircus
ENSSTOG00000027559	LRRC47	96	89.228	ENSTSYG00000009326	LRRC47	96	88.770	Carlito_syrichta
ENSSTOG00000027559	LRRC47	65	83.245	ENSCAPG00000016517	LRRC47	100	82.979	Cavia_aperea
ENSSTOG00000027559	LRRC47	100	87.263	ENSCPOG00000014931	LRRC47	96	87.091	Cavia_porcellus
ENSSTOG00000027559	LRRC47	100	89.438	ENSCCAG00000024895	LRRC47	100	88.679	Cebus_capucinus
ENSSTOG00000027559	LRRC47	100	91.993	ENSCATG00000029337	LRRC47	100	89.779	Cercocebus_atys
ENSSTOG00000027559	LRRC47	100	89.329	ENSCLAG00000006093	LRRC47	100	89.157	Chinchilla_lanigera
ENSSTOG00000027559	LRRC47	100	91.993	ENSCSAG00000000727	LRRC47	100	89.779	Chlorocebus_sabaeus
ENSSTOG00000027559	LRRC47	99	61.296	ENSCPBG00000019404	LRRC47	100	60.963	Chrysemys_picta_bellii
ENSSTOG00000027559	LRRC47	79	89.032	ENSCANG00000030701	LRRC47	96	88.387	Colobus_angolensis_palliatus
ENSSTOG00000027559	LRRC47	99	85.166	ENSCGRG00001015159	Lrrc47	90	83.592	Cricetulus_griseus_chok1gshd
ENSSTOG00000027559	LRRC47	66	80.469	ENSCGRG00000017336	Lrrc47	100	77.394	Cricetulus_griseus_crigri
ENSSTOG00000027559	LRRC47	99	52.356	ENSCSEG00000006217	lrrc47	95	53.299	Cynoglossus_semilaevis
ENSSTOG00000027559	LRRC47	65	84.211	ENSDORG00000016594	Lrrc47	99	84.211	Dipodomys_ordii
ENSSTOG00000027559	LRRC47	100	86.621	ENSEASG00005021788	LRRC47	100	86.371	Equus_asinus_asinus
ENSSTOG00000027559	LRRC47	99	86.770	ENSECAG00000022472	LRRC47	91	86.542	Equus_caballus
ENSSTOG00000027559	LRRC47	99	51.765	ENSELUG00000017544	lrrc47	98	51.178	Esox_lucius
ENSSTOG00000027559	LRRC47	94	84.095	ENSFCAG00000011632	LRRC47	97	84.029	Felis_catus
ENSSTOG00000027559	LRRC47	78	63.111	ENSFALG00000009631	LRRC47	99	64.055	Ficedula_albicollis
ENSSTOG00000027559	LRRC47	99	52.249	ENSGMOG00000015674	lrrc47	99	52.249	Gadus_morhua
ENSSTOG00000027559	LRRC47	98	62.241	ENSGALG00000050995	LRRC47	99	63.058	Gallus_gallus
ENSSTOG00000027559	LRRC47	99	54.007	ENSGACG00000005550	lrrc47	99	53.833	Gasterosteus_aculeatus
ENSSTOG00000027559	LRRC47	100	64.226	ENSGAGG00000022584	LRRC47	99	63.561	Gopherus_agassizii
ENSSTOG00000027559	LRRC47	100	91.482	ENSGGOG00000015571	LRRC47	100	90.630	Gorilla_gorilla
ENSSTOG00000027559	LRRC47	100	87.263	ENSHGLG00000018278	LRRC47	96	87.263	Heterocephalus_glaber_female
ENSSTOG00000027559	LRRC47	70	83.088	ENSHGLG00100008507	LRRC47	100	83.623	Heterocephalus_glaber_male
ENSSTOG00000027559	LRRC47	99	55.867	ENSHCOG00000006348	lrrc47	97	55.517	Hippocampus_comes
ENSSTOG00000027559	LRRC47	99	88.696	ENSJJAG00000017474	Lrrc47	97	88.640	Jaculus_jaculus
ENSSTOG00000027559	LRRC47	99	54.310	ENSKMAG00000003414	lrrc47	99	54.310	Kryptolebias_marmoratus
ENSSTOG00000027559	LRRC47	100	85.077	ENSLAFG00000011657	LRRC47	99	85.077	Loxodonta_africana
ENSSTOG00000027559	LRRC47	100	71.380	ENSMFAG00000045730	LRRC47	90	96.602	Macaca_fascicularis
ENSSTOG00000027559	LRRC47	99	92.096	ENSMNEG00000042488	LRRC47	99	89.932	Macaca_nemestrina
ENSSTOG00000027559	LRRC47	77	88.132	ENSMLEG00000043735	LRRC47	91	87.473	Mandrillus_leucophaeus
ENSSTOG00000027559	LRRC47	99	87.238	ENSMAUG00000021337	Lrrc47	98	85.442	Mesocricetus_auratus
ENSSTOG00000027559	LRRC47	100	88.144	ENSMICG00000026816	LRRC47	100	88.756	Microcebus_murinus
ENSSTOG00000027559	LRRC47	100	86.897	ENSMOCG00000021279	Lrrc47	100	85.714	Microtus_ochrogaster
ENSSTOG00000027559	LRRC47	99	53.380	ENSMMOG00000017007	lrrc47	99	52.830	Mola_mola
ENSSTOG00000027559	LRRC47	99	73.298	ENSMODG00000006554	LRRC47	100	72.509	Monodelphis_domestica
ENSSTOG00000027559	LRRC47	99	87.153	MGP_CAROLIEiJ_G0026864	Lrrc47	99	85.345	Mus_caroli
ENSSTOG00000027559	LRRC47	99	86.979	ENSMUSG00000029028	Lrrc47	99	85.172	Mus_musculus
ENSSTOG00000027559	LRRC47	99	86.237	MGP_PahariEiJ_G0029212	Lrrc47	99	85.172	Mus_pahari
ENSSTOG00000027559	LRRC47	99	87.153	MGP_SPRETEiJ_G0027857	Lrrc47	99	85.345	Mus_spretus
ENSSTOG00000027559	LRRC47	65	77.749	ENSMPUG00000007321	LRRC47	75	77.749	Mustela_putorius_furo
ENSSTOG00000027559	LRRC47	98	86.491	ENSNGAG00000022153	Lrrc47	99	85.886	Nannospalax_galili
ENSSTOG00000027559	LRRC47	100	87.564	ENSNLEG00000008131	LRRC47	100	87.053	Nomascus_leucogenys
ENSSTOG00000027559	LRRC47	84	86.299	ENSODEG00000010882	LRRC47	93	86.299	Octodon_degus
ENSSTOG00000027559	LRRC47	96	56.684	ENSORLG00000002532	lrrc47	99	56.328	Oryzias_latipes
ENSSTOG00000027559	LRRC47	99	56.304	ENSORLG00020019601	lrrc47	99	55.959	Oryzias_latipes_hni
ENSSTOG00000027559	LRRC47	99	55.959	ENSORLG00015014040	lrrc47	99	55.613	Oryzias_latipes_hsok
ENSSTOG00000027559	LRRC47	99	55.613	ENSOMEG00000008989	lrrc47	99	55.268	Oryzias_melastigma
ENSSTOG00000027559	LRRC47	100	87.479	ENSOGAG00000001553	LRRC47	100	87.053	Otolemur_garnettii
ENSSTOG00000027559	LRRC47	99	81.771	ENSOARG00000015290	LRRC47	99	81.693	Ovis_aries
ENSSTOG00000027559	LRRC47	98	88.863	ENSPPAG00000036370	-	100	88.167	Pan_paniscus
ENSSTOG00000027559	LRRC47	99	83.536	ENSPPRG00000005261	LRRC47	99	83.477	Panthera_pardus
ENSSTOG00000027559	LRRC47	100	91.312	ENSPTRG00000000068	LRRC47	100	90.460	Pan_troglodytes
ENSSTOG00000027559	LRRC47	100	91.993	ENSPANG00000012437	LRRC47	100	89.779	Papio_anubis
ENSSTOG00000027559	LRRC47	65	66.753	ENSPSIG00000004196	LRRC47	100	64.829	Pelodiscus_sinensis
ENSSTOG00000027559	LRRC47	65	81.649	ENSPEMG00000021068	Lrrc47	100	81.117	Peromyscus_maniculatus_bairdii
ENSSTOG00000027559	LRRC47	98	74.653	ENSPCIG00000003638	LRRC47	100	75.897	Phascolarctos_cinereus
ENSSTOG00000027559	LRRC47	94	55.109	ENSPFOG00000000992	lrrc47	94	55.556	Poecilia_formosa
ENSSTOG00000027559	LRRC47	99	55.614	ENSPLAG00000008077	lrrc47	99	55.614	Poecilia_latipinna
ENSSTOG00000027559	LRRC47	99	55.190	ENSPMEG00000007367	lrrc47	99	55.245	Poecilia_mexicana
ENSSTOG00000027559	LRRC47	100	91.141	ENSPPYG00000001960	LRRC47	100	90.290	Pongo_abelii
ENSSTOG00000027559	LRRC47	99	88.908	ENSPCOG00000019161	LRRC47	99	89.249	Propithecus_coquereli
ENSSTOG00000027559	LRRC47	100	84.220	ENSPVAG00000009839	LRRC47	100	84.354	Pteropus_vampyrus
ENSSTOG00000027559	LRRC47	100	54.701	ENSPNAG00000017982	lrrc47	100	54.329	Pygocentrus_nattereri
ENSSTOG00000027559	LRRC47	99	87.047	ENSRNOG00000024796	Lrrc47	99	86.207	Rattus_norvegicus
ENSSTOG00000027559	LRRC47	100	92.164	ENSRBIG00000019437	LRRC47	100	90.119	Rhinopithecus_bieti
ENSSTOG00000027559	LRRC47	100	92.164	ENSRROG00000043182	LRRC47	100	90.119	Rhinopithecus_roxellana
ENSSTOG00000027559	LRRC47	78	87.527	ENSSBOG00000026334	LRRC47	97	84.167	Saimiri_boliviensis_boliviensis
ENSSTOG00000027559	LRRC47	98	60.922	ENSSHAG00000007360	LRRC47	99	62.017	Sarcophilus_harrisii
ENSSTOG00000027559	LRRC47	99	54.561	ENSSMAG00000009344	lrrc47	99	53.873	Scophthalmus_maximus
ENSSTOG00000027559	LRRC47	99	53.806	ENSSDUG00000014618	lrrc47	99	53.819	Seriola_dumerili
ENSSTOG00000027559	LRRC47	99	54.498	ENSSLDG00000018908	lrrc47	99	54.167	Seriola_lalandi_dorsalis
ENSSTOG00000027559	LRRC47	99	61.945	ENSSPUG00000010277	LRRC47	99	61.074	Sphenodon_punctatus
ENSSTOG00000027559	LRRC47	99	56.499	ENSSPAG00000005188	lrrc47	99	56.379	Stegastes_partitus
ENSSTOG00000027559	LRRC47	99	84.165	ENSSSCG00000039516	LRRC47	99	83.932	Sus_scrofa
ENSSTOG00000027559	LRRC47	71	65.301	ENSTGUG00000002737	LRRC47	99	65.271	Taeniopygia_guttata
ENSSTOG00000027559	LRRC47	99	53.448	ENSTRUG00000017696	lrrc47	99	53.240	Takifugu_rubripes
ENSSTOG00000027559	LRRC47	99	52.422	ENSTNIG00000010923	lrrc47	99	52.797	Tetraodon_nigroviridis
ENSSTOG00000027559	LRRC47	100	83.533	ENSTTRG00000011751	LRRC47	100	82.624	Tursiops_truncatus
ENSSTOG00000027559	LRRC47	88	82.205	ENSUAMG00000012080	LRRC47	97	82.012	Ursus_americanus
ENSSTOG00000027559	LRRC47	66	77.403	ENSUMAG00000010781	LRRC47	81	77.143	Ursus_maritimus
ENSSTOG00000027559	LRRC47	99	75.507	ENSVVUG00000027118	LRRC47	99	73.299	Vulpes_vulpes
ENSSTOG00000027559	LRRC47	99	59.589	ENSXETG00000006029	lrrc47	99	59.589	Xenopus_tropicalis
ENSSTOG00000027559	LRRC47	98	55.035	ENSXCOG00000002813	lrrc47	98	55.458	Xiphophorus_couchianus
ENSSTOG00000027559	LRRC47	99	55.088	ENSXMAG00000019386	lrrc47	99	55.088	Xiphophorus_maculatus