EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000027719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 2256 bases
Position: chrJH393434.1:1436134-1438389
Accession: 101970680
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017689	KH_1	PF00013.29	5.1e-14	1	1
ENSSTOP00000017689	DEAD	PF00270.29	1.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000023173	-	2256	XM_005334810	ENSSTOP00000017689	751 (aa)	XP_005334867	I3MZZ3

Gene Model

Click here to download ENSSTOG00000027719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000027719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000027719	-	54	30.282	ENSSTOG00000005213	DDX10	56	32.194
ENSSTOG00000027719	-	56	30.660	ENSSTOG00000014475	DDX6	86	30.660
ENSSTOG00000027719	-	55	39.414	ENSSTOG00000004219	DDX23	54	39.414
ENSSTOG00000027719	-	61	40.564	ENSSTOG00000025564	DDX46	51	40.564
ENSSTOG00000027719	-	50	30.023	ENSSTOG00000007985	DDX31	63	30.023
ENSSTOG00000027719	-	51	39.141	ENSSTOG00000003171	DDX41	63	39.141
ENSSTOG00000027719	-	50	35.101	ENSSTOG00000027266	DDX47	87	35.101
ENSSTOG00000027719	-	59	44.643	ENSSTOG00000013699	DDX17	60	44.643
ENSSTOG00000027719	-	50	39.231	ENSSTOG00000008094	DDX3X	58	38.462
ENSSTOG00000027719	-	62	42.558	ENSSTOG00000012526	DDX5	76	42.887
ENSSTOG00000027719	-	75	63.345	ENSSTOG00000032538	-	99	63.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000027719	-	79	74.916	ENSAMEG00000019953	-	99	74.627	Ailuropoda_melanoleuca
ENSSTOG00000027719	-	77	74.614	ENSBTAG00000046635	-	94	74.614	Bos_taurus
ENSSTOG00000027719	-	51	78.740	ENSCAFG00020005312	-	82	78.534	Canis_lupus_dingo
ENSSTOG00000027719	-	78	73.765	ENSCHIG00000020582	-	95	74.315	Capra_hircus
ENSSTOG00000027719	-	79	74.875	ENSCPOG00000013960	-	95	70.437	Cavia_porcellus
ENSSTOG00000027719	-	79	72.787	ENSCLAG00000017424	-	97	69.139	Chinchilla_lanigera
ENSSTOG00000027719	-	78	74.830	ENSEASG00005001728	-	93	74.247	Equus_asinus_asinus
ENSSTOG00000027719	-	78	74.787	ENSECAG00000035665	-	96	74.080	Equus_caballus
ENSSTOG00000027719	-	78	74.660	ENSECAG00000037015	DDX53	96	74.080	Equus_caballus
ENSSTOG00000027719	-	55	66.827	ENSFDAG00000018215	-	90	66.827	Fukomys_damarensis
ENSSTOG00000027719	-	66	74.797	ENSFDAG00000020660	-	96	74.797	Fukomys_damarensis
ENSSTOG00000027719	-	82	71.870	ENSLAFG00000011531	-	96	71.870	Loxodonta_africana
ENSSTOG00000027719	-	78	76.182	ENSMPUG00000019441	-	98	75.793	Mustela_putorius_furo
ENSSTOG00000027719	-	77	71.478	ENSMLUG00000022321	-	97	69.427	Myotis_lucifugus
ENSSTOG00000027719	-	79	70.588	ENSMLUG00000022233	-	99	69.967	Myotis_lucifugus
ENSSTOG00000027719	-	78	74.359	ENSOCUG00000004437	-	97	68.817	Oryctolagus_cuniculus
ENSSTOG00000027719	-	79	74.493	ENSOGAG00000026282	-	97	73.235	Otolemur_garnettii
ENSSTOG00000027719	-	75	76.626	ENSOARG00000016525	-	95	75.643	Ovis_aries
ENSSTOG00000027719	-	77	77.397	ENSPPRG00000011327	-	96	71.994	Panthera_pardus
ENSSTOG00000027719	-	77	77.226	ENSPTIG00000001243	-	96	71.689	Panthera_tigris_altaica
ENSSTOG00000027719	-	79	74.242	ENSPVAG00000001484	-	95	74.086	Pteropus_vampyrus
ENSSTOG00000027719	-	79	76.884	ENSSSCG00000012169	-	98	75.447	Sus_scrofa
ENSSTOG00000027719	-	79	73.613	ENSTBEG00000014650	-	96	72.787	Tupaia_belangeri
ENSSTOG00000027719	-	80	66.887	ENSTTRG00000016514	-	95	66.887	Tursiops_truncatus
ENSSTOG00000027719	-	79	77.258	ENSUAMG00000000177	-	94	77.295	Ursus_americanus
ENSSTOG00000027719	-	50	83.333	ENSUMAG00000011448	-	84	83.333	Ursus_maritimus
ENSSTOG00000027719	-	80	76.364	ENSVPAG00000007860	-	96	76.364	Vicugna_pacos
ENSSTOG00000027719	-	79	75.000	ENSVVUG00000012789	-	97	75.000	Vulpes_vulpes