EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000027821 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 6214 bases
Position: chrJH393295.1:16157485-16163698
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000017518	LSM	PF01423.22	5.6e-20	1	1
ENSSTOP00000029285	LSM	PF01423.22	5.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000028747	-	663	XM_013356432	ENSSTOP00000017518	220 (aa)	-	I3MZH2
ENSSTOT00000040866	-	672	-	ENSSTOP00000029285	223 (aa)	-	A0A287D6W8

Gene Model

Click here to download ENSSTOG00000027821's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000027821's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000027821	-	62	95.588	ENSSTOG00000001339	SNRPN	90	75.115
ENSSTOG00000027821	-	62	97.794	ENSSTOG00000033664	-	90	80.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000027821	-	62	99.265	ENSG00000125835	SNRPB	94	81.944	Homo_sapiens
ENSSTOG00000027821	-	62	99.265	ENSAMEG00000011353	SNRPB	89	81.944	Ailuropoda_melanoleuca
ENSSTOG00000027821	-	61	95.556	ENSACIG00000014480	snrpb	83	77.005	Amphilophus_citrinellus
ENSSTOG00000027821	-	62	94.853	ENSAOCG00000006876	snrpb	93	63.964	Amphiprion_ocellaris
ENSSTOG00000027821	-	62	94.853	ENSAPEG00000021585	snrpb	82	78.689	Amphiprion_percula
ENSSTOG00000027821	-	60	96.241	ENSACAG00000002053	SNRPB	92	78.404	Anolis_carolinensis
ENSSTOG00000027821	-	62	91.912	ENSANAG00000036271	-	77	74.346	Aotus_nancymaae
ENSSTOG00000027821	-	62	99.265	ENSANAG00000024443	-	94	81.944	Aotus_nancymaae
ENSSTOG00000027821	-	62	94.853	ENSACLG00000014707	snrpb	90	70.698	Astatotilapia_calliptera
ENSSTOG00000027821	-	62	94.118	ENSAMXG00000029434	snrpb	90	77.570	Astyanax_mexicanus
ENSSTOG00000027821	-	62	99.265	ENSBTAG00000001038	SNRPB	94	81.944	Bos_taurus
ENSSTOG00000027821	-	62	99.265	ENSCJAG00000020971	-	94	81.944	Callithrix_jacchus
ENSSTOG00000027821	-	87	76.555	ENSCJAG00000023097	-	65	86.452	Callithrix_jacchus
ENSSTOG00000027821	-	62	99.265	ENSCAFG00000006693	-	94	81.944	Canis_familiaris
ENSSTOG00000027821	-	62	99.265	ENSCAFG00020016981	-	90	81.944	Canis_lupus_dingo
ENSSTOG00000027821	-	62	99.265	ENSCHIG00000025449	-	94	81.944	Capra_hircus
ENSSTOG00000027821	-	62	79.412	ENSTSYG00000032303	-	72	67.016	Carlito_syrichta
ENSSTOG00000027821	-	62	99.265	ENSTSYG00000014498	-	94	81.944	Carlito_syrichta
ENSSTOG00000027821	-	62	99.265	ENSCAPG00000012669	SNRPB	94	81.944	Cavia_aperea
ENSSTOG00000027821	-	62	99.265	ENSCPOG00000039408	SNRPB	94	81.944	Cavia_porcellus
ENSSTOG00000027821	-	56	86.992	ENSCCAG00000035140	-	81	84.783	Cebus_capucinus
ENSSTOG00000027821	-	62	99.265	ENSCCAG00000026002	SNRPB	94	81.944	Cebus_capucinus
ENSSTOG00000027821	-	62	99.265	ENSCATG00000030230	SNRPB	94	81.944	Cercocebus_atys
ENSSTOG00000027821	-	62	99.265	ENSCLAG00000012442	SNRPB	91	81.944	Chinchilla_lanigera
ENSSTOG00000027821	-	62	99.265	ENSCSAG00000010840	SNRPB	94	81.944	Chlorocebus_sabaeus
ENSSTOG00000027821	-	62	95.588	ENSCPBG00000026801	SNRPB	94	77.778	Chrysemys_picta_bellii
ENSSTOG00000027821	-	62	99.265	ENSCANG00000019461	SNRPB	94	81.944	Colobus_angolensis_palliatus
ENSSTOG00000027821	-	62	99.265	ENSCGRG00001023046	Snrpb	94	81.944	Cricetulus_griseus_chok1gshd
ENSSTOG00000027821	-	62	99.265	ENSCGRG00000010423	Snrpb	95	82.160	Cricetulus_griseus_crigri
ENSSTOG00000027821	-	62	94.853	ENSCSEG00000020328	snrpb	89	78.404	Cynoglossus_semilaevis
ENSSTOG00000027821	-	62	94.853	ENSDARG00000011125	snrpb	90	78.037	Danio_rerio
ENSSTOG00000027821	-	62	99.265	ENSDNOG00000015545	-	90	81.944	Dasypus_novemcinctus
ENSSTOG00000027821	-	61	100.000	ENSDORG00000029558	Snrpb	93	82.326	Dipodomys_ordii
ENSSTOG00000027821	-	64	68.750	FBgn0262601	SmB	74	66.000	Drosophila_melanogaster
ENSSTOG00000027821	-	93	62.054	ENSETEG00000006830	SNRPB	97	62.054	Echinops_telfairi
ENSSTOG00000027821	-	62	88.235	ENSEBUG00000007467	SNRPB	92	59.729	Eptatretus_burgeri
ENSSTOG00000027821	-	62	98.529	ENSEASG00005012991	SNRPB	94	81.481	Equus_asinus_asinus
ENSSTOG00000027821	-	62	99.265	ENSECAG00000011944	SNRPB	94	81.944	Equus_caballus
ENSSTOG00000027821	-	62	99.265	ENSEEUG00000015568	SNRPB	76	81.944	Erinaceus_europaeus
ENSSTOG00000027821	-	62	94.853	ENSELUG00000014564	snrpb	94	79.245	Esox_lucius
ENSSTOG00000027821	-	62	99.265	ENSFCAG00000034090	-	94	81.944	Felis_catus
ENSSTOG00000027821	-	60	96.241	ENSFALG00000004866	SNRPB	92	79.343	Ficedula_albicollis
ENSSTOG00000027821	-	62	99.265	ENSFDAG00000009937	SNRPB	94	81.944	Fukomys_damarensis
ENSSTOG00000027821	-	62	95.588	ENSGALG00000035421	SNRPN	90	79.167	Gallus_gallus
ENSSTOG00000027821	-	62	94.118	ENSGAFG00000019558	snrpb	94	69.159	Gambusia_affinis
ENSSTOG00000027821	-	62	94.853	ENSGACG00000003262	snrpb	89	78.404	Gasterosteus_aculeatus
ENSSTOG00000027821	-	62	95.588	ENSGAGG00000001308	SNRPB	90	77.315	Gopherus_agassizii
ENSSTOG00000027821	-	62	99.265	ENSGGOG00000016138	SNRPB	94	81.944	Gorilla_gorilla
ENSSTOG00000027821	-	62	94.853	ENSHBUG00000008369	snrpb	90	70.698	Haplochromis_burtoni
ENSSTOG00000027821	-	62	89.706	ENSHGLG00000016505	-	70	84.932	Heterocephalus_glaber_female
ENSSTOG00000027821	-	62	99.265	ENSHGLG00000016241	-	94	81.944	Heterocephalus_glaber_female
ENSSTOG00000027821	-	62	89.706	ENSHGLG00100004178	-	70	84.932	Heterocephalus_glaber_male
ENSSTOG00000027821	-	62	99.265	ENSHGLG00100012877	-	94	81.944	Heterocephalus_glaber_male
ENSSTOG00000027821	-	62	94.853	ENSHCOG00000014888	snrpb	89	78.404	Hippocampus_comes
ENSSTOG00000027821	-	62	94.853	ENSIPUG00000024569	SNRPB	90	78.037	Ictalurus_punctatus
ENSSTOG00000027821	-	62	99.265	ENSJJAG00000024170	Snrpb	94	81.944	Jaculus_jaculus
ENSSTOG00000027821	-	62	95.588	ENSKMAG00000014494	snrpb	77	76.596	Kryptolebias_marmoratus
ENSSTOG00000027821	-	63	94.928	ENSLBEG00000005678	snrpb	89	78.404	Labrus_bergylta
ENSSTOG00000027821	-	62	95.588	ENSLOCG00000002687	snrpb	90	78.505	Lepisosteus_oculatus
ENSSTOG00000027821	-	62	93.382	ENSLAFG00000017588	SNRPB	93	78.241	Loxodonta_africana
ENSSTOG00000027821	-	62	99.265	ENSMFAG00000038756	SNRPB	94	81.944	Macaca_fascicularis
ENSSTOG00000027821	-	96	66.094	ENSMMUG00000010050	SNRPB	94	81.944	Macaca_mulatta
ENSSTOG00000027821	-	62	99.265	ENSMNEG00000027954	SNRPB	94	81.944	Macaca_nemestrina
ENSSTOG00000027821	-	62	99.265	ENSMLEG00000022346	SNRPB	94	81.944	Mandrillus_leucophaeus
ENSSTOG00000027821	-	62	94.853	ENSMZEG00005011856	snrpb	90	70.698	Maylandia_zebra
ENSSTOG00000027821	-	62	99.265	ENSMICG00000016519	SNRPB	94	81.944	Microcebus_murinus
ENSSTOG00000027821	-	62	88.235	ENSMICG00000015983	-	72	78.846	Microcebus_murinus
ENSSTOG00000027821	-	62	98.529	ENSMOCG00000002892	-	94	81.481	Microtus_ochrogaster
ENSSTOG00000027821	-	61	81.343	ENSMOCG00000021362	-	80	60.753	Microtus_ochrogaster
ENSSTOG00000027821	-	62	94.853	ENSMMOG00000013226	snrpb	91	78.404	Mola_mola
ENSSTOG00000027821	-	62	99.265	MGP_CAROLIEiJ_G0024293	Snrpb	94	81.481	Mus_caroli
ENSSTOG00000027821	-	62	99.265	ENSMUSG00000027404	Snrpb	94	81.481	Mus_musculus
ENSSTOG00000027821	-	62	99.265	MGP_PahariEiJ_G0025738	Snrpb	94	81.481	Mus_pahari
ENSSTOG00000027821	-	62	99.265	MGP_SPRETEiJ_G0025213	Snrpb	94	81.481	Mus_spretus
ENSSTOG00000027821	-	62	99.265	ENSMPUG00000009283	SNRPB	94	81.944	Mustela_putorius_furo
ENSSTOG00000027821	-	62	95.588	ENSMLUG00000016951	SNRPB	90	79.167	Myotis_lucifugus
ENSSTOG00000027821	-	62	99.265	ENSNGAG00000012051	Snrpb	94	81.944	Nannospalax_galili
ENSSTOG00000027821	-	61	95.556	ENSNBRG00000006353	snrpb	72	77.005	Neolamprologus_brichardi
ENSSTOG00000027821	-	62	99.265	ENSNLEG00000029067	SNRPB	91	81.944	Nomascus_leucogenys
ENSSTOG00000027821	-	62	97.794	ENSMEUG00000015625	SNRPB	96	77.880	Notamacropus_eugenii
ENSSTOG00000027821	-	62	91.912	ENSODEG00000016060	-	80	75.916	Octodon_degus
ENSSTOG00000027821	-	62	99.265	ENSODEG00000004305	-	94	81.944	Octodon_degus
ENSSTOG00000027821	-	62	94.853	ENSONIG00000000248	snrpb	90	70.698	Oreochromis_niloticus
ENSSTOG00000027821	-	62	96.324	ENSOCUG00000028215	-	93	78.475	Oryctolagus_cuniculus
ENSSTOG00000027821	-	87	56.039	ENSOCUG00000026813	-	67	63.871	Oryctolagus_cuniculus
ENSSTOG00000027821	-	62	94.853	ENSOCUG00000022423	-	79	87.097	Oryctolagus_cuniculus
ENSSTOG00000027821	-	62	99.265	ENSOCUG00000014042	-	90	81.944	Oryctolagus_cuniculus
ENSSTOG00000027821	-	88	75.829	ENSOCUG00000021456	-	90	78.341	Oryctolagus_cuniculus
ENSSTOG00000027821	-	63	94.203	ENSORLG00000021862	snrpb	52	94.203	Oryzias_latipes
ENSSTOG00000027821	-	62	99.265	ENSOGAG00000016149	SNRPB	90	81.944	Otolemur_garnettii
ENSSTOG00000027821	-	62	99.265	ENSOARG00000006740	SNRPB	94	81.944	Ovis_aries
ENSSTOG00000027821	-	62	99.265	ENSPPAG00000036314	SNRPB	94	81.944	Pan_paniscus
ENSSTOG00000027821	-	62	99.265	ENSPPRG00000003233	-	94	81.944	Panthera_pardus
ENSSTOG00000027821	-	62	99.265	ENSPTIG00000007468	SNRPB	94	81.944	Panthera_tigris_altaica
ENSSTOG00000027821	-	62	99.265	ENSPTRG00000013176	SNRPB	94	81.944	Pan_troglodytes
ENSSTOG00000027821	-	62	99.265	ENSPANG00000020362	SNRPB	90	81.944	Papio_anubis
ENSSTOG00000027821	-	62	94.853	ENSPKIG00000002865	snrpb	90	78.037	Paramormyrops_kingsleyae
ENSSTOG00000027821	-	62	95.588	ENSPSIG00000014125	SNRPB	89	77.315	Pelodiscus_sinensis
ENSSTOG00000027821	-	63	92.029	ENSPMGG00000016349	snrpb	92	70.093	Periophthalmus_magnuspinnatus
ENSSTOG00000027821	-	62	99.265	ENSPEMG00000007948	Snrpb	94	81.944	Peromyscus_maniculatus_bairdii
ENSSTOG00000027821	-	62	97.794	ENSPCIG00000004694	SNRPB	90	78.341	Phascolarctos_cinereus
ENSSTOG00000027821	-	62	94.853	ENSPFOG00000011802	snrpb	58	94.853	Poecilia_formosa
ENSSTOG00000027821	-	61	95.556	ENSPLAG00000014130	snrpb	59	95.556	Poecilia_latipinna
ENSSTOG00000027821	-	61	95.556	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSSTOG00000027821	-	62	99.265	ENSPPYG00000010841	SNRPB	94	81.944	Pongo_abelii
ENSSTOG00000027821	-	62	99.265	ENSPCOG00000013686	SNRPB	94	81.944	Propithecus_coquereli
ENSSTOG00000027821	-	62	97.794	ENSPVAG00000017013	SNRPB	76	81.019	Pteropus_vampyrus
ENSSTOG00000027821	-	62	94.853	ENSPNYG00000014788	snrpb	90	70.698	Pundamilia_nyererei
ENSSTOG00000027821	-	62	94.853	ENSPNAG00000016126	snrpb	90	78.037	Pygocentrus_nattereri
ENSSTOG00000027821	-	62	99.265	ENSRNOG00000006961	Snrpb	94	81.944	Rattus_norvegicus
ENSSTOG00000027821	-	62	99.265	ENSRBIG00000040505	SNRPB	93	82.326	Rhinopithecus_bieti
ENSSTOG00000027821	-	62	99.265	ENSRROG00000036094	SNRPB	94	81.944	Rhinopithecus_roxellana
ENSSTOG00000027821	-	62	99.265	ENSSBOG00000027310	SNRPB	94	81.944	Saimiri_boliviensis_boliviensis
ENSSTOG00000027821	-	62	98.529	ENSSHAG00000010394	SNRPB	90	78.802	Sarcophilus_harrisii
ENSSTOG00000027821	-	62	94.118	ENSSFOG00015002870	snrpb	80	76.064	Scleropages_formosus
ENSSTOG00000027821	-	62	94.853	ENSSMAG00000006766	snrpb	89	78.404	Scophthalmus_maximus
ENSSTOG00000027821	-	62	94.853	ENSSDUG00000018539	snrpb	90	70.698	Seriola_dumerili
ENSSTOG00000027821	-	62	94.853	ENSSLDG00000022391	snrpb	90	70.698	Seriola_lalandi_dorsalis
ENSSTOG00000027821	-	61	80.741	ENSSARG00000003084	SNRPB	92	69.907	Sorex_araneus
ENSSTOG00000027821	-	62	95.588	ENSSPUG00000015659	SNRPB	90	77.315	Sphenodon_punctatus
ENSSTOG00000027821	-	62	94.853	ENSSPAG00000021992	snrpb	90	70.698	Stegastes_partitus
ENSSTOG00000027821	-	62	99.265	ENSSSCG00000040857	-	94	81.944	Sus_scrofa
ENSSTOG00000027821	-	94	63.393	ENSSSCG00000011966	-	88	59.420	Sus_scrofa
ENSSTOG00000027821	-	63	94.245	ENSTGUG00000005684	SNRPB	59	93.571	Taeniopygia_guttata
ENSSTOG00000027821	-	62	94.853	ENSTRUG00000023094	snrpb	93	78.404	Takifugu_rubripes
ENSSTOG00000027821	-	62	94.853	ENSTNIG00000002991	snrpb	89	78.404	Tetraodon_nigroviridis
ENSSTOG00000027821	-	75	92.073	ENSUAMG00000005984	-	75	92.638	Ursus_americanus
ENSSTOG00000027821	-	75	92.727	ENSUMAG00000002123	-	76	93.293	Ursus_maritimus
ENSSTOG00000027821	-	99	61.441	ENSVVUG00000010086	-	65	72.258	Vulpes_vulpes
ENSSTOG00000027821	-	62	98.529	ENSVVUG00000025654	-	90	81.481	Vulpes_vulpes
ENSSTOG00000027821	-	62	96.324	ENSXETG00000027266	snrpb	91	78.241	Xenopus_tropicalis
ENSSTOG00000027821	-	61	95.556	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus