EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000029627 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1321 bases
Position: chrJH393388.1:3499217-3500537
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000028619	RRM_1	PF00076.22	8.2e-25	1	2
ENSSTOP00000028619	RRM_1	PF00076.22	8.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041591	-	1221	-	ENSSTOP00000028619	406 (aa)	-	A0A287D515

Gene Model

Click here to download ENSSTOG00000029627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000029627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000029627	-	50	36.111	ENSSTOG00000010416	PABPC4	65	35.196
ENSSTOG00000029627	-	54	32.967	ENSSTOG00000003739	PABPC1L	59	32.967

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000029627	-	74	67.913	ENSG00000143368	SF3B4	99	73.545	Homo_sapiens
ENSSTOG00000029627	-	74	67.913	ENSANAG00000031025	SF3B4	93	71.501	Aotus_nancymaae
ENSSTOG00000029627	-	52	73.043	ENSACLG00000014260	sf3b4	95	58.462	Astatotilapia_calliptera
ENSSTOG00000029627	-	71	63.211	ENSCHIG00000006654	-	69	61.246	Capra_hircus
ENSSTOG00000029627	-	74	67.913	ENSTSYG00000009295	SF3B4	93	71.501	Carlito_syrichta
ENSSTOG00000029627	-	68	65.815	ENSCCAG00000019823	-	93	67.595	Cebus_capucinus
ENSSTOG00000029627	-	74	67.913	ENSCATG00000033114	SF3B4	93	71.501	Cercocebus_atys
ENSSTOG00000029627	-	74	67.913	ENSCSAG00000018129	SF3B4	93	71.501	Chlorocebus_sabaeus
ENSSTOG00000029627	-	74	67.913	ENSCANG00000035579	SF3B4	93	71.501	Colobus_angolensis_palliatus
ENSSTOG00000029627	-	52	72.489	ENSCVAG00000005536	sf3b4	96	55.779	Cyprinodon_variegatus
ENSSTOG00000029627	-	86	63.351	ENSDNOG00000037231	-	94	63.874	Dasypus_novemcinctus
ENSSTOG00000029627	-	74	67.913	ENSGGOG00000004761	SF3B4	93	71.501	Gorilla_gorilla
ENSSTOG00000029627	-	69	65.085	ENSGGOG00000038845	-	71	63.729	Gorilla_gorilla
ENSSTOG00000029627	-	52	73.043	ENSHBUG00000002028	sf3b4	95	58.462	Haplochromis_burtoni
ENSSTOG00000029627	-	52	73.043	ENSKMAG00000008154	sf3b4	74	66.000	Kryptolebias_marmoratus
ENSSTOG00000029627	-	50	75.566	ENSLACG00000004436	SF3B4	68	74.390	Latimeria_chalumnae
ENSSTOG00000029627	-	89	51.500	ENSMFAG00000039067	-	72	56.164	Macaca_fascicularis
ENSSTOG00000029627	-	74	67.913	ENSMFAG00000042395	SF3B4	93	71.501	Macaca_fascicularis
ENSSTOG00000029627	-	74	67.913	ENSMMUG00000007256	SF3B4	93	71.501	Macaca_mulatta
ENSSTOG00000029627	-	89	51.250	ENSMNEG00000031526	-	72	56.164	Macaca_nemestrina
ENSSTOG00000029627	-	74	67.913	ENSMNEG00000031839	SF3B4	93	71.501	Macaca_nemestrina
ENSSTOG00000029627	-	74	67.913	ENSMLEG00000038667	SF3B4	93	71.501	Mandrillus_leucophaeus
ENSSTOG00000029627	-	52	73.913	ENSMAMG00000014692	sf3b4	96	59.694	Mastacembelus_armatus
ENSSTOG00000029627	-	52	73.043	ENSMZEG00005026741	sf3b4	95	58.462	Maylandia_zebra
ENSSTOG00000029627	-	74	67.913	ENSMODG00000018767	SF3B4	93	71.247	Monodelphis_domestica
ENSSTOG00000029627	-	52	73.043	ENSNBRG00000013865	sf3b4	95	58.718	Neolamprologus_brichardi
ENSSTOG00000029627	-	83	62.634	ENSNLEG00000000537	-	76	69.565	Nomascus_leucogenys
ENSSTOG00000029627	-	69	62.458	ENSODEG00000003597	-	75	68.439	Octodon_degus
ENSSTOG00000029627	-	81	60.452	ENSODEG00000008916	-	50	66.304	Octodon_degus
ENSSTOG00000029627	-	52	72.609	ENSONIG00000002730	sf3b4	95	58.524	Oreochromis_niloticus
ENSSTOG00000029627	-	71	65.815	ENSOARG00000007368	-	72	66.113	Ovis_aries
ENSSTOG00000029627	-	69	67.559	ENSPPAG00000030024	-	72	69.360	Pan_paniscus
ENSSTOG00000029627	-	74	67.913	ENSPPAG00000040904	SF3B4	93	71.501	Pan_paniscus
ENSSTOG00000029627	-	74	67.913	ENSPTRG00000001243	SF3B4	93	71.501	Pan_troglodytes
ENSSTOG00000029627	-	69	65.552	ENSPTRG00000049727	-	72	65.217	Pan_troglodytes
ENSSTOG00000029627	-	74	67.913	ENSPANG00000005126	SF3B4	93	71.501	Papio_anubis
ENSSTOG00000029627	-	74	67.913	ENSPCIG00000008765	SF3B4	93	71.247	Phascolarctos_cinereus
ENSSTOG00000029627	-	60	70.342	ENSPFOG00000005754	sf3b4	96	57.692	Poecilia_formosa
ENSSTOG00000029627	-	60	70.342	ENSPLAG00000001401	sf3b4	93	60.405	Poecilia_latipinna
ENSSTOG00000029627	-	60	69.962	ENSPMEG00000014452	sf3b4	55	57.692	Poecilia_mexicana
ENSSTOG00000029627	-	60	69.962	ENSPREG00000011076	sf3b4	61	72.764	Poecilia_reticulata
ENSSTOG00000029627	-	52	73.043	ENSPNYG00000012700	sf3b4	95	58.462	Pundamilia_nyererei
ENSSTOG00000029627	-	74	67.913	ENSRBIG00000043392	SF3B4	93	71.501	Rhinopithecus_bieti
ENSSTOG00000029627	-	86	57.682	ENSRROG00000028213	-	97	57.672	Rhinopithecus_roxellana
ENSSTOG00000029627	-	74	67.913	ENSRROG00000029366	SF3B4	93	71.501	Rhinopithecus_roxellana
ENSSTOG00000029627	-	81	56.583	ENSSBOG00000025174	-	68	61.667	Saimiri_boliviensis_boliviensis
ENSSTOG00000029627	-	74	67.913	ENSSBOG00000012310	-	93	71.501	Saimiri_boliviensis_boliviensis
ENSSTOG00000029627	-	69	68.212	ENSSHAG00000004043	SF3B4	94	69.466	Sarcophilus_harrisii
ENSSTOG00000029627	-	54	73.529	ENSSPUG00000001028	SF3B4	98	57.720	Sphenodon_punctatus
ENSSTOG00000029627	-	75	50.158	ENSSSCG00000039440	-	71	51.724	Sus_scrofa
ENSSTOG00000029627	-	52	75.109	ENSTGUG00000004470	SF3B4	97	71.660	Taeniopygia_guttata