EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000029860 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1163 bases
Position: chrJH393299.1:7006054-7007216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029275	ECR1_N	PF14382.6	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000033164	-	366	-	ENSSTOP00000029275	121 (aa)	-	A0A287D6V8

Gene Model

Click here to download ENSSTOG00000029860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000029860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000029860	-	93	84.426	ENSSTOG00000006615	EXOSC1	63	84.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000029860	-	93	84.298	ENSG00000171311	EXOSC1	86	84.298	Homo_sapiens
ENSSTOG00000029860	-	91	63.866	ENSAPOG00000007822	exosc1	61	63.866	Acanthochromis_polyacanthus
ENSSTOG00000029860	-	93	82.787	ENSAMEG00000000129	EXOSC1	63	82.787	Ailuropoda_melanoleuca
ENSSTOG00000029860	-	83	66.364	ENSACIG00000018956	exosc1	54	66.364	Amphilophus_citrinellus
ENSSTOG00000029860	-	91	63.866	ENSAOCG00000010699	exosc1	61	66.990	Amphiprion_ocellaris
ENSSTOG00000029860	-	78	63.107	ENSAPEG00000012690	exosc1	61	63.107	Amphiprion_percula
ENSSTOG00000029860	-	91	63.025	ENSATEG00000018683	exosc1	61	63.025	Anabas_testudineus
ENSSTOG00000029860	-	92	67.500	ENSACAG00000002101	EXOSC1	62	67.500	Anolis_carolinensis
ENSSTOG00000029860	-	93	85.950	ENSANAG00000034669	EXOSC1	73	85.950	Aotus_nancymaae
ENSSTOG00000029860	-	91	63.866	ENSACLG00000021243	exosc1	61	63.866	Astatotilapia_calliptera
ENSSTOG00000029860	-	87	68.421	ENSAMXG00000011116	exosc1	59	68.421	Astyanax_mexicanus
ENSSTOG00000029860	-	93	82.787	ENSBTAG00000012699	EXOSC1	63	82.787	Bos_taurus
ENSSTOG00000029860	-	93	85.124	ENSCJAG00000016586	EXOSC1	73	85.124	Callithrix_jacchus
ENSSTOG00000029860	-	93	83.607	ENSCAFG00000009068	EXOSC1	59	83.607	Canis_familiaris
ENSSTOG00000029860	-	93	83.607	ENSCAFG00020006002	EXOSC1	59	83.607	Canis_lupus_dingo
ENSSTOG00000029860	-	93	82.787	ENSCHIG00000015253	EXOSC1	63	82.787	Capra_hircus
ENSSTOG00000029860	-	93	83.471	ENSTSYG00000000760	EXOSC1	86	83.471	Carlito_syrichta
ENSSTOG00000029860	-	93	82.787	ENSCPOG00000001173	EXOSC1	63	82.787	Cavia_porcellus
ENSSTOG00000029860	-	89	52.101	ENSCCAG00000023986	EXOSC1	70	52.101	Cebus_capucinus
ENSSTOG00000029860	-	93	84.298	ENSCATG00000034114	EXOSC1	86	84.298	Cercocebus_atys
ENSSTOG00000029860	-	93	83.607	ENSCLAG00000002463	EXOSC1	63	83.607	Chinchilla_lanigera
ENSSTOG00000029860	-	93	81.967	ENSCSAG00000005870	EXOSC1	63	81.967	Chlorocebus_sabaeus
ENSSTOG00000029860	-	87	64.912	ENSCHOG00000006477	EXOSC1	61	64.912	Choloepus_hoffmanni
ENSSTOG00000029860	-	81	69.159	ENSCPBG00000011949	EXOSC1	88	69.159	Chrysemys_picta_bellii
ENSSTOG00000029860	-	88	41.379	ENSCING00000022734	-	56	41.379	Ciona_intestinalis
ENSSTOG00000029860	-	88	43.966	ENSCSAVG00000010865	-	59	43.966	Ciona_savignyi
ENSSTOG00000029860	-	93	84.298	ENSCANG00000034159	EXOSC1	86	84.298	Colobus_angolensis_palliatus
ENSSTOG00000029860	-	93	81.148	ENSCGRG00001000335	Exosc1	63	81.148	Cricetulus_griseus_chok1gshd
ENSSTOG00000029860	-	93	81.148	ENSCGRG00000011602	Exosc1	63	81.148	Cricetulus_griseus_crigri
ENSSTOG00000029860	-	86	53.846	ENSCSEG00000007895	exosc1	50	53.846	Cynoglossus_semilaevis
ENSSTOG00000029860	-	91	62.185	ENSCVAG00000016748	exosc1	65	63.478	Cyprinodon_variegatus
ENSSTOG00000029860	-	87	67.544	ENSDARG00000059841	exosc1	59	67.544	Danio_rerio
ENSSTOG00000029860	-	93	82.927	ENSDNOG00000007983	EXOSC1	83	82.927	Dasypus_novemcinctus
ENSSTOG00000029860	-	93	83.607	ENSDORG00000016528	Exosc1	63	83.607	Dipodomys_ordii
ENSSTOG00000029860	-	88	38.793	FBgn0032346	Csl4	57	38.793	Drosophila_melanogaster
ENSSTOG00000029860	-	93	78.689	ENSETEG00000002469	-	63	78.689	Echinops_telfairi
ENSSTOG00000029860	-	89	45.833	ENSEBUG00000008164	exosc1	61	45.833	Eptatretus_burgeri
ENSSTOG00000029860	-	92	71.930	ENSEASG00005008684	EXOSC1	71	71.930	Equus_asinus_asinus
ENSSTOG00000029860	-	92	71.930	ENSECAG00000010621	EXOSC1	71	71.930	Equus_caballus
ENSSTOG00000029860	-	93	81.967	ENSEEUG00000005647	EXOSC1	63	81.967	Erinaceus_europaeus
ENSSTOG00000029860	-	86	66.372	ENSELUG00000017369	exosc1	52	66.372	Esox_lucius
ENSSTOG00000029860	-	94	84.553	ENSFCAG00000040563	EXOSC1	87	84.553	Felis_catus
ENSSTOG00000029860	-	93	68.033	ENSFALG00000008450	EXOSC1	63	68.033	Ficedula_albicollis
ENSSTOG00000029860	-	93	82.787	ENSFDAG00000000846	EXOSC1	63	82.787	Fukomys_damarensis
ENSSTOG00000029860	-	91	63.025	ENSFHEG00000009154	exosc1	61	63.025	Fundulus_heteroclitus
ENSSTOG00000029860	-	91	63.866	ENSGMOG00000008993	exosc1	61	63.866	Gadus_morhua
ENSSTOG00000029860	-	93	57.522	ENSGALG00000039917	EXOSC1	57	57.522	Gallus_gallus
ENSSTOG00000029860	-	91	62.185	ENSGAFG00000010265	exosc1	58	62.185	Gambusia_affinis
ENSSTOG00000029860	-	91	63.866	ENSGACG00000018936	exosc1	61	63.866	Gasterosteus_aculeatus
ENSSTOG00000029860	-	93	68.033	ENSGAGG00000019192	EXOSC1	63	68.033	Gopherus_agassizii
ENSSTOG00000029860	-	93	70.536	ENSGGOG00000003099	EXOSC1	83	70.536	Gorilla_gorilla
ENSSTOG00000029860	-	91	63.866	ENSHBUG00000017857	exosc1	61	63.866	Haplochromis_burtoni
ENSSTOG00000029860	-	93	81.967	ENSHGLG00000016927	EXOSC1	63	81.967	Heterocephalus_glaber_female
ENSSTOG00000029860	-	93	81.967	ENSHGLG00100012208	EXOSC1	63	81.967	Heterocephalus_glaber_male
ENSSTOG00000029860	-	91	64.706	ENSHCOG00000019882	exosc1	61	64.706	Hippocampus_comes
ENSSTOG00000029860	-	91	63.866	ENSIPUG00000007685	exosc1	61	63.866	Ictalurus_punctatus
ENSSTOG00000029860	-	93	81.967	ENSJJAG00000013311	Exosc1	63	81.967	Jaculus_jaculus
ENSSTOG00000029860	-	91	63.025	ENSLBEG00000011448	exosc1	61	63.025	Labrus_bergylta
ENSSTOG00000029860	-	93	81.148	ENSLAFG00000015983	EXOSC1	63	81.148	Loxodonta_africana
ENSSTOG00000029860	-	93	84.298	ENSMFAG00000001493	EXOSC1	86	84.298	Macaca_fascicularis
ENSSTOG00000029860	-	93	84.298	ENSMMUG00000020028	EXOSC1	86	84.298	Macaca_mulatta
ENSSTOG00000029860	-	93	84.298	ENSMNEG00000029816	EXOSC1	86	84.298	Macaca_nemestrina
ENSSTOG00000029860	-	94	72.093	ENSMLEG00000027643	EXOSC1	71	72.093	Mandrillus_leucophaeus
ENSSTOG00000029860	-	91	63.866	ENSMAMG00000012200	exosc1	61	63.866	Mastacembelus_armatus
ENSSTOG00000029860	-	91	63.866	ENSMZEG00005007042	exosc1	61	63.866	Maylandia_zebra
ENSSTOG00000029860	-	93	67.257	ENSMAUG00000020462	-	57	67.257	Mesocricetus_auratus
ENSSTOG00000029860	-	93	85.124	ENSMICG00000007664	EXOSC1	66	84.746	Microcebus_murinus
ENSSTOG00000029860	-	93	81.148	ENSMOCG00000006004	-	63	81.148	Microtus_ochrogaster
ENSSTOG00000029860	-	88	70.085	ENSMOCG00000017124	-	58	70.085	Microtus_ochrogaster
ENSSTOG00000029860	-	59	55.000	ENSMMOG00000021403	exosc1	51	55.000	Mola_mola
ENSSTOG00000029860	-	93	79.508	ENSMODG00000004213	EXOSC1	62	79.508	Monodelphis_domestica
ENSSTOG00000029860	-	81	67.290	ENSMALG00000007061	exosc1	54	67.290	Monopterus_albus
ENSSTOG00000029860	-	93	80.328	MGP_CAROLIEiJ_G0022959	Exosc1	63	80.328	Mus_caroli
ENSSTOG00000029860	-	93	80.328	ENSMUSG00000034321	Exosc1	63	80.328	Mus_musculus
ENSSTOG00000029860	-	93	81.148	MGP_PahariEiJ_G0014449	Exosc1	63	81.148	Mus_pahari
ENSSTOG00000029860	-	93	80.328	MGP_SPRETEiJ_G0023880	Exosc1	63	80.328	Mus_spretus
ENSSTOG00000029860	-	93	82.787	ENSMPUG00000017044	EXOSC1	63	82.787	Mustela_putorius_furo
ENSSTOG00000029860	-	93	83.607	ENSMLUG00000009228	EXOSC1	63	83.607	Myotis_lucifugus
ENSSTOG00000029860	-	93	79.508	ENSNGAG00000022033	Exosc1	63	79.508	Nannospalax_galili
ENSSTOG00000029860	-	56	55.844	ENSNBRG00000024007	exosc1	50	55.844	Neolamprologus_brichardi
ENSSTOG00000029860	-	93	83.471	ENSNLEG00000013872	EXOSC1	86	83.471	Nomascus_leucogenys
ENSSTOG00000029860	-	88	85.217	ENSMEUG00000002246	EXOSC1	100	85.217	Notamacropus_eugenii
ENSSTOG00000029860	-	93	81.148	ENSOPRG00000005065	EXOSC1	63	81.148	Ochotona_princeps
ENSSTOG00000029860	-	93	82.787	ENSODEG00000016709	EXOSC1	63	82.787	Octodon_degus
ENSSTOG00000029860	-	91	63.866	ENSONIG00000017683	exosc1	61	63.866	Oreochromis_niloticus
ENSSTOG00000029860	-	93	82.114	ENSOCUG00000011898	-	63	82.114	Oryctolagus_cuniculus
ENSSTOG00000029860	-	93	78.689	ENSOCUG00000026461	-	63	78.689	Oryctolagus_cuniculus
ENSSTOG00000029860	-	91	65.546	ENSORLG00000011595	exosc1	61	65.546	Oryzias_latipes
ENSSTOG00000029860	-	91	65.546	ENSORLG00020005831	exosc1	61	65.546	Oryzias_latipes_hni
ENSSTOG00000029860	-	91	65.546	ENSORLG00015004317	exosc1	61	65.546	Oryzias_latipes_hsok
ENSSTOG00000029860	-	75	49.000	ENSOMEG00000013907	exosc1	51	49.000	Oryzias_melastigma
ENSSTOG00000029860	-	93	83.607	ENSOGAG00000016259	EXOSC1	63	83.607	Otolemur_garnettii
ENSSTOG00000029860	-	93	81.967	ENSOARG00000010136	EXOSC1	63	81.967	Ovis_aries
ENSSTOG00000029860	-	80	83.962	ENSPPAG00000039842	EXOSC1	54	83.962	Pan_paniscus
ENSSTOG00000029860	-	94	84.553	ENSPPRG00000023366	EXOSC1	87	84.553	Panthera_pardus
ENSSTOG00000029860	-	94	84.553	ENSPTIG00000017701	EXOSC1	87	84.553	Panthera_tigris_altaica
ENSSTOG00000029860	-	93	84.298	ENSPTRG00000002808	EXOSC1	86	84.298	Pan_troglodytes
ENSSTOG00000029860	-	93	84.298	ENSPANG00000021324	EXOSC1	86	84.298	Papio_anubis
ENSSTOG00000029860	-	91	63.866	ENSPKIG00000016037	exosc1	61	63.866	Paramormyrops_kingsleyae
ENSSTOG00000029860	-	87	53.333	ENSPMGG00000014002	exosc1	53	53.333	Periophthalmus_magnuspinnatus
ENSSTOG00000029860	-	93	81.148	ENSPEMG00000010710	-	63	81.148	Peromyscus_maniculatus_bairdii
ENSSTOG00000029860	-	86	57.895	ENSPMAG00000000195	exosc1	58	57.895	Petromyzon_marinus
ENSSTOG00000029860	-	93	80.328	ENSPCIG00000002210	EXOSC1	62	80.328	Phascolarctos_cinereus
ENSSTOG00000029860	-	91	61.345	ENSPFOG00000006755	exosc1	58	61.345	Poecilia_formosa
ENSSTOG00000029860	-	91	61.345	ENSPLAG00000005880	exosc1	61	61.345	Poecilia_latipinna
ENSSTOG00000029860	-	91	61.345	ENSPMEG00000015598	exosc1	58	61.345	Poecilia_mexicana
ENSSTOG00000029860	-	88	52.830	ENSPREG00000000405	exosc1	50	52.830	Poecilia_reticulata
ENSSTOG00000029860	-	93	81.967	ENSPPYG00000002531	EXOSC1	63	81.967	Pongo_abelii
ENSSTOG00000029860	-	93	81.967	ENSPCAG00000009135	EXOSC1	63	81.967	Procavia_capensis
ENSSTOG00000029860	-	78	85.437	ENSPCOG00000027539	EXOSC1	80	85.437	Propithecus_coquereli
ENSSTOG00000029860	-	93	83.607	ENSPVAG00000003372	EXOSC1	63	83.607	Pteropus_vampyrus
ENSSTOG00000029860	-	91	63.866	ENSPNYG00000021745	exosc1	61	63.866	Pundamilia_nyererei
ENSSTOG00000029860	-	87	66.667	ENSPNAG00000001944	exosc1	59	66.667	Pygocentrus_nattereri
ENSSTOG00000029860	-	93	81.148	ENSRNOG00000048708	Exosc1	63	81.148	Rattus_norvegicus
ENSSTOG00000029860	-	93	84.298	ENSRBIG00000035618	EXOSC1	86	84.298	Rhinopithecus_bieti
ENSSTOG00000029860	-	93	84.298	ENSRROG00000032589	EXOSC1	86	84.298	Rhinopithecus_roxellana
ENSSTOG00000029860	-	93	85.950	ENSSBOG00000000359	EXOSC1	73	85.950	Saimiri_boliviensis_boliviensis
ENSSTOG00000029860	-	60	84.932	ENSSHAG00000018219	EXOSC1	50	84.932	Sarcophilus_harrisii
ENSSTOG00000029860	-	90	63.559	ENSSFOG00015016289	-	61	63.559	Scleropages_formosus
ENSSTOG00000029860	-	91	64.706	ENSSFOG00015009069	exosc1	61	64.706	Scleropages_formosus
ENSSTOG00000029860	-	91	63.866	ENSSMAG00000003721	exosc1	61	63.866	Scophthalmus_maximus
ENSSTOG00000029860	-	91	63.025	ENSSDUG00000002993	exosc1	65	64.348	Seriola_dumerili
ENSSTOG00000029860	-	91	63.025	ENSSLDG00000025181	exosc1	65	64.348	Seriola_lalandi_dorsalis
ENSSTOG00000029860	-	93	61.475	ENSSARG00000000162	EXOSC1	63	61.475	Sorex_araneus
ENSSTOG00000029860	-	93	66.393	ENSSPUG00000012263	EXOSC1	63	66.393	Sphenodon_punctatus
ENSSTOG00000029860	-	88	65.217	ENSSPAG00000016792	exosc1	54	65.217	Stegastes_partitus
ENSSTOG00000029860	-	93	81.967	ENSSSCG00000010518	EXOSC1	57	81.967	Sus_scrofa
ENSSTOG00000029860	-	91	64.706	ENSTGUG00000009692	EXOSC1	61	64.706	Taeniopygia_guttata
ENSSTOG00000029860	-	89	61.538	ENSTRUG00000007706	exosc1	61	63.636	Takifugu_rubripes
ENSSTOG00000029860	-	89	62.393	ENSTNIG00000014079	exosc1	59	62.393	Tetraodon_nigroviridis
ENSSTOG00000029860	-	93	72.727	ENSTBEG00000006011	EXOSC1	63	72.727	Tupaia_belangeri
ENSSTOG00000029860	-	84	81.081	ENSTTRG00000009887	EXOSC1	60	81.081	Tursiops_truncatus
ENSSTOG00000029860	-	91	63.025	ENSXETG00000003434	exosc1	61	63.025	Xenopus_tropicalis
ENSSTOG00000029860	-	91	52.727	ENSXMAG00000023382	exosc1	53	52.727	Xiphophorus_maculatus