EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000030282 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 5674 bases
Position: chrJH393840.1:244244-249917
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000026493	Smg4_UPF3	PF03467.15	6.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032795	-	751	-	ENSSTOP00000026493	238 (aa)	-	A0A287CYZ2

Gene Model

Click here to download ENSSTOG00000030282's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000030282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000030282	-	95	76.652	ENSG00000169062	UPF3A	99	80.769	Homo_sapiens
ENSSTOG00000030282	-	68	63.975	ENSG00000125351	UPF3B	77	63.095	Homo_sapiens
ENSSTOG00000030282	-	95	60.619	ENSACIG00000020468	upf3a	70	78.095	Amphilophus_citrinellus
ENSSTOG00000030282	-	67	58.125	ENSANAG00000033169	-	54	63.235	Aotus_nancymaae
ENSSTOG00000030282	-	74	59.322	ENSANAG00000021894	-	79	61.538	Aotus_nancymaae
ENSSTOG00000030282	-	67	61.875	ENSAMXG00000000199	upf3b	52	63.226	Astyanax_mexicanus
ENSSTOG00000030282	-	91	80.365	ENSBTAG00000047365	-	98	78.802	Bos_taurus
ENSSTOG00000030282	-	68	63.975	ENSBTAG00000035615	UPF3B	52	63.975	Bos_taurus
ENSSTOG00000030282	-	71	61.310	ENSCJAG00000004975	UPF3B	79	60.947	Callithrix_jacchus
ENSSTOG00000030282	-	68	63.975	ENSCHIG00000018011	-	52	63.975	Capra_hircus
ENSSTOG00000030282	-	71	61.176	ENSTSYG00000014690	UPF3B	76	58.235	Carlito_syrichta
ENSSTOG00000030282	-	95	73.568	ENSCPOG00000006824	UPF3A	52	73.568	Cavia_porcellus
ENSSTOG00000030282	-	63	54.667	ENSCCAG00000029813	-	54	51.852	Cebus_capucinus
ENSSTOG00000030282	-	71	61.905	ENSCATG00000017506	UPF3B	79	61.538	Cercocebus_atys
ENSSTOG00000030282	-	59	76.596	ENSCLAG00000000093	-	97	76.596	Chinchilla_lanigera
ENSSTOG00000030282	-	66	53.846	ENSCING00000008396	-	98	53.846	Ciona_intestinalis
ENSSTOG00000030282	-	68	63.975	ENSCANG00000029220	UPF3B	51	63.975	Colobus_angolensis_palliatus
ENSSTOG00000030282	-	88	81.905	ENSCGRG00001017387	Upf3a	53	76.991	Cricetulus_griseus_chok1gshd
ENSSTOG00000030282	-	87	81.553	ENSCGRG00000001468	Upf3a	52	76.923	Cricetulus_griseus_crigri
ENSSTOG00000030282	-	88	74.439	ENSDNOG00000034391	UPF3A	54	69.874	Dasypus_novemcinctus
ENSSTOG00000030282	-	72	57.558	ENSFHEG00000010418	upf3a	82	57.558	Fundulus_heteroclitus
ENSSTOG00000030282	-	89	71.429	ENSGALG00000016815	-	99	71.429	Gallus_gallus
ENSSTOG00000030282	-	60	76.923	ENSGACG00000001972	upf3a	50	71.069	Gasterosteus_aculeatus
ENSSTOG00000030282	-	66	59.236	ENSGACG00000017435	upf3b	55	62.667	Gasterosteus_aculeatus
ENSSTOG00000030282	-	61	84.028	ENSGAGG00000001952	UPF3A	82	84.028	Gopherus_agassizii
ENSSTOG00000030282	-	68	63.975	ENSGGOG00000023995	UPF3B	58	70.175	Gorilla_gorilla
ENSSTOG00000030282	-	95	77.434	ENSHGLG00000001544	UPF3A	54	77.434	Heterocephalus_glaber_female
ENSSTOG00000030282	-	95	77.434	ENSHGLG00100013244	UPF3A	54	77.434	Heterocephalus_glaber_male
ENSSTOG00000030282	-	69	69.512	ENSHCOG00000013985	upf3a	65	72.727	Hippocampus_comes
ENSSTOG00000030282	-	89	83.962	ENSJJAG00000018099	-	99	83.962	Jaculus_jaculus
ENSSTOG00000030282	-	63	54.088	ENSMFAG00000045275	-	81	51.765	Macaca_fascicularis
ENSSTOG00000030282	-	71	61.905	ENSMFAG00000045414	UPF3B	79	61.538	Macaca_fascicularis
ENSSTOG00000030282	-	71	61.905	ENSMMUG00000020222	UPF3B	79	61.538	Macaca_mulatta
ENSSTOG00000030282	-	67	51.190	ENSMMUG00000046682	-	81	51.205	Macaca_mulatta
ENSSTOG00000030282	-	71	61.905	ENSMNEG00000039794	UPF3B	79	61.538	Macaca_nemestrina
ENSSTOG00000030282	-	63	53.459	ENSMNEG00000040898	-	81	51.176	Macaca_nemestrina
ENSSTOG00000030282	-	71	61.905	ENSMLEG00000010999	UPF3B	79	61.538	Mandrillus_leucophaeus
ENSSTOG00000030282	-	59	77.305	ENSMICG00000042420	-	95	73.649	Microcebus_murinus
ENSSTOG00000030282	-	68	63.975	ENSMICG00000001743	UPF3B	50	63.975	Microcebus_murinus
ENSSTOG00000030282	-	88	83.810	ENSMOCG00000000550	Upf3a	63	78.761	Microtus_ochrogaster
ENSSTOG00000030282	-	87	77.295	MGP_CAROLIEiJ_G0030848	Upf3a	56	75.217	Mus_caroli
ENSSTOG00000030282	-	87	77.778	ENSMUSG00000038398	Upf3a	54	75.652	Mus_musculus
ENSSTOG00000030282	-	87	75.845	MGP_PahariEiJ_G0021311	Upf3a	54	73.913	Mus_pahari
ENSSTOG00000030282	-	87	77.778	MGP_SPRETEiJ_G0031958	Upf3a	54	75.652	Mus_spretus
ENSSTOG00000030282	-	95	79.646	ENSNGAG00000019314	Upf3a	53	79.646	Nannospalax_galili
ENSSTOG00000030282	-	73	56.897	ENSNBRG00000011560	upf3b	76	65.766	Neolamprologus_brichardi
ENSSTOG00000030282	-	95	78.070	ENSNLEG00000007563	UPF3A	50	78.070	Nomascus_leucogenys
ENSSTOG00000030282	-	79	47.959	ENSNLEG00000027516	-	79	53.012	Nomascus_leucogenys
ENSSTOG00000030282	-	68	63.975	ENSNLEG00000014897	UPF3B	61	70.175	Nomascus_leucogenys
ENSSTOG00000030282	-	76	46.237	ENSODEG00000006064	-	77	53.595	Octodon_degus
ENSSTOG00000030282	-	97	78.632	ENSODEG00000009176	-	92	78.205	Octodon_degus
ENSSTOG00000030282	-	72	51.913	ENSODEG00000007164	-	69	55.901	Octodon_degus
ENSSTOG00000030282	-	54	51.493	ENSODEG00000000596	-	76	46.667	Octodon_degus
ENSSTOG00000030282	-	68	58.385	ENSORLG00020003758	upf3b	53	61.290	Oryzias_latipes_hni
ENSSTOG00000030282	-	95	74.890	ENSOGAG00000004788	UPF3A	55	74.890	Otolemur_garnettii
ENSSTOG00000030282	-	68	63.975	ENSPPAG00000040390	UPF3B	58	70.175	Pan_paniscus
ENSSTOG00000030282	-	68	63.975	ENSPTIG00000015264	UPF3B	51	63.975	Panthera_tigris_altaica
ENSSTOG00000030282	-	68	63.975	ENSPTRG00000022228	UPF3B	58	70.175	Pan_troglodytes
ENSSTOG00000030282	-	71	61.905	ENSPANG00000000900	UPF3B	79	61.538	Papio_anubis
ENSSTOG00000030282	-	71	49.438	ENSPANG00000029350	-	82	51.176	Papio_anubis
ENSSTOG00000030282	-	64	64.474	ENSPKIG00000019226	upf3b	75	67.521	Paramormyrops_kingsleyae
ENSSTOG00000030282	-	66	59.748	ENSPMGG00000016067	upf3b	54	62.162	Periophthalmus_magnuspinnatus
ENSSTOG00000030282	-	95	75.664	ENSPEMG00000019968	-	54	74.783	Peromyscus_maniculatus_bairdii
ENSSTOG00000030282	-	77	80.541	ENSPCIG00000019590	-	96	73.214	Phascolarctos_cinereus
ENSSTOG00000030282	-	80	65.789	ENSPLAG00000011960	upf3a	76	56.209	Poecilia_latipinna
ENSSTOG00000030282	-	73	60.694	ENSPREG00000005566	upf3a	89	60.694	Poecilia_reticulata
ENSSTOG00000030282	-	68	63.975	ENSPCOG00000021960	UPF3B	50	63.975	Propithecus_coquereli
ENSSTOG00000030282	-	64	65.132	ENSPNAG00000021528	upf3b	51	63.816	Pygocentrus_nattereri
ENSSTOG00000030282	-	95	76.549	ENSRNOG00000017397	Upf3a	57	75.652	Rattus_norvegicus
ENSSTOG00000030282	-	71	61.905	ENSRROG00000041031	UPF3B	79	61.538	Rhinopithecus_roxellana
ENSSTOG00000030282	-	68	63.975	ENSSBOG00000019740	UPF3B	77	63.975	Saimiri_boliviensis_boliviensis
ENSSTOG00000030282	-	95	57.965	ENSSMAG00000003858	upf3a	79	71.795	Scophthalmus_maximus
ENSSTOG00000030282	-	95	60.177	ENSSDUG00000009680	upf3a	91	60.947	Seriola_dumerili
ENSSTOG00000030282	-	88	62.381	ENSSPAG00000007938	upf3a	66	76.923	Stegastes_partitus
ENSSTOG00000030282	-	95	74.890	ENSSSCG00000024679	UPF3A	55	74.449	Sus_scrofa
ENSSTOG00000030282	-	75	59.777	ENSVVUG00000011594	UPF3B	80	61.988	Vulpes_vulpes
ENSSTOG00000030282	-	72	59.783	ENSXETG00000007440	upf3b	71	64.242	Xenopus_tropicalis
ENSSTOG00000030282	-	61	62.500	ENSXCOG00000016586	upf3b	74	65.766	Xiphophorus_couchianus