EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000030417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 4127 bases
Position: chrJH393469.1:217711-221837
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	1	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	2	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	3	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	4	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	5	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	6	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	7	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	8	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	9	10
ENSSTOP00000030400	zf-C2H2	PF00096.26	1e-64	10	10
ENSSTOP00000030400	zf-met	PF12874.7	0.00027	1	2
ENSSTOP00000030400	zf-met	PF12874.7	0.00027	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032709	-	1988	-	ENSSTOP00000030400	446 (aa)	-	A0A287DA14

Gene Model

Click here to download ENSSTOG00000030417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000030417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000030417	-	84	45.238	ENSSTOG00000025586	ZNF865	78	32.986
ENSSTOG00000030417	-	90	51.373	ENSSTOG00000026739	ZNF2	66	51.373
ENSSTOG00000030417	-	74	44.144	ENSSTOG00000032944	SCRT2	72	44.144
ENSSTOG00000030417	-	74	41.975	ENSSTOG00000027842	MAZ	77	37.589
ENSSTOG00000030417	-	76	43.820	ENSSTOG00000020707	PATZ1	56	32.468
ENSSTOG00000030417	-	89	47.590	ENSSTOG00000034090	ZNF226	79	47.590
ENSSTOG00000030417	-	85	35.374	ENSSTOG00000019989	ZFP64	74	38.182
ENSSTOG00000030417	-	67	45.783	ENSSTOG00000000887	ZNF784	65	42.391
ENSSTOG00000030417	-	75	35.366	ENSSTOG00000028569	ZNF423	96	35.366
ENSSTOG00000030417	-	78	48.739	ENSSTOG00000004741	PRDM5	77	48.739
ENSSTOG00000030417	-	82	34.940	ENSSTOG00000028612	ZNF574	87	34.940
ENSSTOG00000030417	-	96	50.962	ENSSTOG00000034297	-	76	50.962
ENSSTOG00000030417	-	93	47.645	ENSSTOG00000024118	-	84	47.645
ENSSTOG00000030417	-	95	45.588	ENSSTOG00000013458	ZNF112	74	45.588
ENSSTOG00000030417	-	76	35.606	ENSSTOG00000013853	GTF3A	83	35.472
ENSSTOG00000030417	-	65	47.727	ENSSTOG00000028743	SNAI2	52	47.727
ENSSTOG00000030417	-	96	50.000	ENSSTOG00000022317	ZFP1	98	50.000
ENSSTOG00000030417	-	76	46.667	ENSSTOG00000026126	ZNF628	56	48.193
ENSSTOG00000030417	-	87	35.238	ENSSTOG00000019944	ZNF319	93	34.465
ENSSTOG00000030417	-	89	50.254	ENSSTOG00000000130	ZNF691	85	50.254
ENSSTOG00000030417	-	76	35.223	ENSSTOG00000019390	ZNF526	81	35.628
ENSSTOG00000030417	-	100	49.624	ENSSTOG00000023536	-	84	49.624
ENSSTOG00000030417	-	98	53.303	ENSSTOG00000033893	-	90	53.303
ENSSTOG00000030417	-	89	50.000	ENSSTOG00000006987	ZNF236	66	43.089
ENSSTOG00000030417	-	84	41.111	ENSSTOG00000022105	-	78	41.111
ENSSTOG00000030417	-	90	50.199	ENSSTOG00000030403	ZNF768	55	49.421
ENSSTOG00000030417	-	69	39.316	ENSSTOG00000023716	WT1	53	38.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000030417	-	100	45.781	ENSCHIG00000026481	-	86	47.085	Capra_hircus