EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000030430 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 582 bases
Position: chrJH393336.1:7130920-7131501
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029824	GTP_EFTU	PF00009.27	2.9e-21	1	1
ENSSTOP00000025764	GTP_EFTU	PF00009.27	6.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000040226	-	270	-	ENSSTOP00000025764	89 (aa)	-	A0A287CWY2
ENSSTOT00000040629	-	327	-	ENSSTOP00000029824	108 (aa)	-	A0A287D8G4

Gene Model

Click here to download ENSSTOG00000030430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000030430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000030430	-	87	88.298	ENSSTOG00000022945	EFL1	78	98.765

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000030430	-	83	89.247	ENSG00000140598	EFL1	100	96.667	Homo_sapiens
ENSSTOG00000030430	-	69	86.667	ENSAOCG00000024337	-	79	86.667	Amphiprion_ocellaris
ENSSTOG00000030430	-	83	88.172	ENSCJAG00000015607	-	64	94.737	Callithrix_jacchus
ENSSTOG00000030430	-	76	93.902	ENSCAFG00020015837	-	84	93.902	Canis_lupus_dingo
ENSSTOG00000030430	-	83	87.097	ENSCCAG00000034450	EFL1	81	93.103	Cebus_capucinus
ENSSTOG00000030430	-	81	89.655	ENSCLAG00000010155	EFL1	91	89.655	Chinchilla_lanigera
ENSSTOG00000030430	-	62	100.000	ENSCHOG00000004666	-	57	100.000	Choloepus_hoffmanni
ENSSTOG00000030430	-	81	78.409	ENSDARG00000117086	CABZ01090544.1	92	78.182	Danio_rerio
ENSSTOG00000030430	-	87	88.298	ENSFDAG00000009023	EFL1	98	88.298	Fukomys_damarensis
ENSSTOG00000030430	-	83	76.344	ENSGALG00000006225	EFL1	82	81.928	Gallus_gallus
ENSSTOG00000030430	-	74	80.000	ENSGAFG00000004687	-	82	80.000	Gambusia_affinis
ENSSTOG00000030430	-	80	87.640	ENSGGOG00000008894	-	56	94.231	Gorilla_gorilla
ENSSTOG00000030430	-	75	96.296	ENSHGLG00000011798	EFL1	64	96.296	Heterocephalus_glaber_female
ENSSTOG00000030430	-	75	96.296	ENSHGLG00100010319	EFTUD1	98	96.296	Heterocephalus_glaber_male
ENSSTOG00000030430	-	75	65.217	ENSLBEG00000009564	-	82	65.217	Labrus_bergylta
ENSSTOG00000030430	-	94	80.769	ENSMUSG00000038563	Efl1	99	80.769	Mus_musculus
ENSSTOG00000030430	-	75	95.062	ENSOPRG00000001514	-	95	95.062	Ochotona_princeps
ENSSTOG00000030430	-	83	87.097	ENSODEG00000016193	EFL1	87	95.062	Octodon_degus
ENSSTOG00000030430	-	94	67.961	ENSORLG00000029029	-	94	67.961	Oryzias_latipes
ENSSTOG00000030430	-	83	89.247	ENSPPAG00000027322	-	62	94.643	Pan_paniscus
ENSSTOG00000030430	-	84	86.170	ENSPTRG00000050545	-	59	91.228	Pan_troglodytes
ENSSTOG00000030430	-	60	92.453	ENSPPYG00000006744	-	55	92.453	Pongo_abelii
ENSSTOG00000030430	-	83	87.097	ENSPCAG00000011842	-	71	87.097	Procavia_capensis
ENSSTOG00000030430	-	79	92.941	ENSUAMG00000022106	EFL1	86	92.941	Ursus_americanus
ENSSTOG00000030430	-	79	92.941	ENSUMAG00000010303	EFL1	62	92.941	Ursus_maritimus