EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000030994 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cold shock domain-containing protein E1-like
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 8032 bases
Position: chrJH393936.1:152364-160395
Accession: 101975023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027900	CSD	PF00313.22	4.5e-66	1	4
ENSSTOP00000027900	CSD	PF00313.22	4.5e-66	2	4
ENSSTOP00000027900	CSD	PF00313.22	4.5e-66	3	4
ENSSTOP00000027900	CSD	PF00313.22	4.5e-66	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041673	-	2190	XM_013366306	ENSSTOP00000027900	729 (aa)	XP_013221760	A0A287D308

Gene Model

Click here to download ENSSTOG00000030994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000030994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000030994	-	84	61.203	ENSSTOG00000032722	-	98	61.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000030994	-	100	80.435	ENSG00000009307	CSDE1	97	89.394	Homo_sapiens
ENSSTOG00000030994	-	100	63.985	ENSAPOG00000015538	csde1	100	63.985	Acanthochromis_polyacanthus
ENSSTOG00000030994	-	100	80.051	ENSAMEG00000017129	CSDE1	94	80.051	Ailuropoda_melanoleuca
ENSSTOG00000030994	-	82	62.703	ENSACIG00000015175	csde1	100	62.703	Amphilophus_citrinellus
ENSSTOG00000030994	-	100	64.240	ENSAOCG00000011510	csde1	100	64.240	Amphiprion_ocellaris
ENSSTOG00000030994	-	100	64.240	ENSAPEG00000007194	csde1	100	64.240	Amphiprion_percula
ENSSTOG00000030994	-	100	63.648	ENSATEG00000003864	csde1	100	63.648	Anabas_testudineus
ENSSTOG00000030994	-	100	75.256	ENSAPLG00000008797	CSDE1	100	75.256	Anas_platyrhynchos
ENSSTOG00000030994	-	100	75.373	ENSACAG00000003120	CSDE1	100	75.373	Anolis_carolinensis
ENSSTOG00000030994	-	100	80.179	ENSANAG00000024665	CSDE1	95	80.179	Aotus_nancymaae
ENSSTOG00000030994	-	79	67.910	ENSANAG00000028396	-	91	67.910	Aotus_nancymaae
ENSSTOG00000030994	-	100	63.393	ENSACLG00000013296	csde1	100	63.520	Astatotilapia_calliptera
ENSSTOG00000030994	-	100	63.104	ENSAMXG00000007436	csde1	100	63.104	Astyanax_mexicanus
ENSSTOG00000030994	-	100	80.307	ENSBTAG00000000678	CSDE1	100	80.307	Bos_taurus
ENSSTOG00000030994	-	100	80.179	ENSCJAG00000012565	CSDE1	92	84.319	Callithrix_jacchus
ENSSTOG00000030994	-	98	79.922	ENSCAFG00000009618	CSDE1	94	79.922	Canis_familiaris
ENSSTOG00000030994	-	100	80.307	ENSCAFG00020000481	CSDE1	100	80.307	Canis_lupus_dingo
ENSSTOG00000030994	-	100	80.435	ENSCHIG00000017250	CSDE1	100	80.435	Capra_hircus
ENSSTOG00000030994	-	100	80.307	ENSTSYG00000003747	CSDE1	100	82.183	Carlito_syrichta
ENSSTOG00000030994	-	100	59.429	ENSCAPG00000015128	CSDE1	100	59.429	Cavia_aperea
ENSSTOG00000030994	-	100	77.792	ENSCPOG00000040388	CSDE1	100	77.792	Cavia_porcellus
ENSSTOG00000030994	-	95	65.315	ENSCCAG00000030878	-	91	65.315	Cebus_capucinus
ENSSTOG00000030994	-	100	80.179	ENSCCAG00000036794	CSDE1	100	82.183	Cebus_capucinus
ENSSTOG00000030994	-	91	66.033	ENSCCAG00000033677	-	99	66.033	Cebus_capucinus
ENSSTOG00000030994	-	100	80.435	ENSCATG00000036962	CSDE1	98	82.898	Cercocebus_atys
ENSSTOG00000030994	-	100	80.563	ENSCLAG00000006618	CSDE1	100	80.563	Chinchilla_lanigera
ENSSTOG00000030994	-	100	80.025	ENSCSAG00000001658	CSDE1	95	80.025	Chlorocebus_sabaeus
ENSSTOG00000030994	-	100	69.811	ENSCHOG00000000918	CSDE1	89	69.811	Choloepus_hoffmanni
ENSSTOG00000030994	-	100	75.513	ENSCPBG00000016547	CSDE1	100	75.513	Chrysemys_picta_bellii
ENSSTOG00000030994	-	94	36.954	ENSCING00000014465	-	94	36.954	Ciona_intestinalis
ENSSTOG00000030994	-	96	34.827	ENSCSAVG00000008100	-	99	34.827	Ciona_savignyi
ENSSTOG00000030994	-	74	80.755	ENSCANG00000031069	-	93	80.755	Colobus_angolensis_palliatus
ENSSTOG00000030994	-	100	80.435	ENSCANG00000035096	CSDE1	98	82.898	Colobus_angolensis_palliatus
ENSSTOG00000030994	-	100	80.818	ENSCGRG00001016833	-	100	80.818	Cricetulus_griseus_chok1gshd
ENSSTOG00000030994	-	100	71.429	ENSCGRG00001014011	-	100	71.429	Cricetulus_griseus_chok1gshd
ENSSTOG00000030994	-	95	83.073	ENSCGRG00000002225	-	100	83.073	Cricetulus_griseus_crigri
ENSSTOG00000030994	-	100	65.476	ENSCGRG00000005831	-	100	65.476	Cricetulus_griseus_crigri
ENSSTOG00000030994	-	100	63.265	ENSCSEG00000002620	csde1	100	63.265	Cynoglossus_semilaevis
ENSSTOG00000030994	-	100	62.883	ENSCVAG00000001344	csde1	100	62.883	Cyprinodon_variegatus
ENSSTOG00000030994	-	100	63.782	ENSDARG00000074758	csde1	100	63.782	Danio_rerio
ENSSTOG00000030994	-	100	80.077	ENSDNOG00000010287	-	93	80.077	Dasypus_novemcinctus
ENSSTOG00000030994	-	62	68.696	ENSDNOG00000034464	-	100	68.696	Dasypus_novemcinctus
ENSSTOG00000030994	-	100	79.901	ENSDORG00000011609	Csde1	99	82.530	Dipodomys_ordii
ENSSTOG00000030994	-	93	42.960	FBgn0263352	Unr	75	42.960	Drosophila_melanogaster
ENSSTOG00000030994	-	76	57.641	ENSETEG00000007109	-	99	57.641	Echinops_telfairi
ENSSTOG00000030994	-	90	69.302	ENSETEG00000006280	-	99	69.302	Echinops_telfairi
ENSSTOG00000030994	-	99	64.865	ENSETEG00000013678	-	99	64.865	Echinops_telfairi
ENSSTOG00000030994	-	96	84.971	ENSETEG00000002491	-	82	84.971	Echinops_telfairi
ENSSTOG00000030994	-	99	46.341	ENSEBUG00000008647	csde1	99	44.917	Eptatretus_burgeri
ENSSTOG00000030994	-	100	80.691	ENSEASG00005006284	CSDE1	100	80.149	Equus_asinus_asinus
ENSSTOG00000030994	-	100	80.691	ENSECAG00000020885	CSDE1	100	80.149	Equus_caballus
ENSSTOG00000030994	-	92	86.316	ENSEEUG00000006286	CSDE1	68	86.316	Erinaceus_europaeus
ENSSTOG00000030994	-	100	62.817	ENSELUG00000015507	csde1	100	62.817	Esox_lucius
ENSSTOG00000030994	-	100	80.563	ENSFCAG00000029266	CSDE1	100	80.563	Felis_catus
ENSSTOG00000030994	-	100	75.000	ENSFALG00000003407	CSDE1	100	75.000	Ficedula_albicollis
ENSSTOG00000030994	-	100	79.901	ENSFDAG00000007882	CSDE1	99	82.530	Fukomys_damarensis
ENSSTOG00000030994	-	100	62.903	ENSFHEG00000010799	csde1	100	62.903	Fundulus_heteroclitus
ENSSTOG00000030994	-	99	62.857	ENSGMOG00000012731	csde1	100	62.857	Gadus_morhua
ENSSTOG00000030994	-	98	74.746	ENSGALG00000002139	CSDE1	98	74.746	Gallus_gallus
ENSSTOG00000030994	-	90	61.493	ENSGAFG00000005241	csde1	95	61.493	Gambusia_affinis
ENSSTOG00000030994	-	99	63.896	ENSGACG00000004544	csde1	100	63.896	Gasterosteus_aculeatus
ENSSTOG00000030994	-	100	75.128	ENSGAGG00000017685	CSDE1	100	74.751	Gopherus_agassizii
ENSSTOG00000030994	-	100	80.435	ENSGGOG00000002164	CSDE1	100	80.435	Gorilla_gorilla
ENSSTOG00000030994	-	100	63.393	ENSHBUG00000020315	csde1	100	63.520	Haplochromis_burtoni
ENSSTOG00000030994	-	100	74.323	ENSHGLG00000003829	-	100	74.323	Heterocephalus_glaber_female
ENSSTOG00000030994	-	99	67.812	ENSHGLG00000000650	-	99	67.812	Heterocephalus_glaber_female
ENSSTOG00000030994	-	100	73.671	ENSHGLG00000019549	-	100	73.671	Heterocephalus_glaber_female
ENSSTOG00000030994	-	95	75.724	ENSHGLG00000010039	-	100	75.724	Heterocephalus_glaber_female
ENSSTOG00000030994	-	96	75.904	ENSHGLG00000008555	-	99	75.904	Heterocephalus_glaber_female
ENSSTOG00000030994	-	100	72.645	ENSHGLG00000009620	-	100	73.161	Heterocephalus_glaber_female
ENSSTOG00000030994	-	99	72.129	ENSHGLG00000007471	-	98	72.129	Heterocephalus_glaber_female
ENSSTOG00000030994	-	93	72.122	ENSHGLG00100004195	-	100	72.122	Heterocephalus_glaber_male
ENSSTOG00000030994	-	100	70.452	ENSHGLG00100012072	-	100	70.452	Heterocephalus_glaber_male
ENSSTOG00000030994	-	100	80.691	ENSHGLG00100019438	-	100	80.691	Heterocephalus_glaber_male
ENSSTOG00000030994	-	100	72.267	ENSHGLG00100001846	-	100	72.267	Heterocephalus_glaber_male
ENSSTOG00000030994	-	95	75.501	ENSHGLG00100006910	-	100	75.501	Heterocephalus_glaber_male
ENSSTOG00000030994	-	99	69.677	ENSHGLG00100007287	-	98	69.677	Heterocephalus_glaber_male
ENSSTOG00000030994	-	95	69.933	ENSHGLG00100004833	-	100	69.933	Heterocephalus_glaber_male
ENSSTOG00000030994	-	99	68.486	ENSHGLG00100002245	-	99	68.486	Heterocephalus_glaber_male
ENSSTOG00000030994	-	100	62.755	ENSHCOG00000004158	csde1	100	62.755	Hippocampus_comes
ENSSTOG00000030994	-	100	62.468	ENSIPUG00000000355	csde1	100	62.468	Ictalurus_punctatus
ENSSTOG00000030994	-	100	80.149	ENSJJAG00000019571	Csde1	99	82.831	Jaculus_jaculus
ENSSTOG00000030994	-	100	62.840	ENSKMAG00000005685	csde1	100	62.531	Kryptolebias_marmoratus
ENSSTOG00000030994	-	100	63.903	ENSLBEG00000014770	csde1	100	63.903	Labrus_bergylta
ENSSTOG00000030994	-	100	64.207	ENSLACG00000018452	CSDE1	94	64.373	Latimeria_chalumnae
ENSSTOG00000030994	-	100	66.085	ENSLOCG00000010413	csde1	94	66.085	Lepisosteus_oculatus
ENSSTOG00000030994	-	100	79.284	ENSLAFG00000007150	CSDE1	96	79.284	Loxodonta_africana
ENSSTOG00000030994	-	100	80.435	ENSMFAG00000003674	CSDE1	98	82.898	Macaca_fascicularis
ENSSTOG00000030994	-	100	80.435	ENSMMUG00000001974	CSDE1	100	80.435	Macaca_mulatta
ENSSTOG00000030994	-	100	80.435	ENSMNEG00000045247	CSDE1	98	82.898	Macaca_nemestrina
ENSSTOG00000030994	-	100	80.179	ENSMLEG00000038673	CSDE1	95	79.777	Mandrillus_leucophaeus
ENSSTOG00000030994	-	100	64.623	ENSMAMG00000008821	csde1	100	64.623	Mastacembelus_armatus
ENSSTOG00000030994	-	100	63.393	ENSMZEG00005021675	csde1	100	63.520	Maylandia_zebra
ENSSTOG00000030994	-	100	75.288	ENSMGAG00000016381	CSDE1	100	75.288	Meleagris_gallopavo
ENSSTOG00000030994	-	100	80.273	ENSMAUG00000014031	Csde1	99	82.982	Mesocricetus_auratus
ENSSTOG00000030994	-	100	80.179	ENSMICG00000002050	CSDE1	99	83.036	Microcebus_murinus
ENSSTOG00000030994	-	100	80.818	ENSMOCG00000018960	Csde1	100	80.818	Microtus_ochrogaster
ENSSTOG00000030994	-	100	63.776	ENSMMOG00000015075	csde1	100	63.776	Mola_mola
ENSSTOG00000030994	-	100	77.792	ENSMODG00000004685	CSDE1	100	77.792	Monodelphis_domestica
ENSSTOG00000030994	-	100	64.158	ENSMALG00000007132	csde1	100	64.158	Monopterus_albus
ENSSTOG00000030994	-	100	80.563	MGP_CAROLIEiJ_G0025444	Csde1	97	89.041	Mus_caroli
ENSSTOG00000030994	-	100	80.691	ENSMUSG00000068823	Csde1	97	89.041	Mus_musculus
ENSSTOG00000030994	-	100	80.946	MGP_PahariEiJ_G0026888	Csde1	97	89.041	Mus_pahari
ENSSTOG00000030994	-	100	80.946	MGP_SPRETEiJ_G0026394	Csde1	97	89.041	Mus_spretus
ENSSTOG00000030994	-	98	79.646	ENSMPUG00000005753	CSDE1	99	79.646	Mustela_putorius_furo
ENSSTOG00000030994	-	100	79.668	ENSMLUG00000005681	CSDE1	94	79.668	Myotis_lucifugus
ENSSTOG00000030994	-	95	67.209	ENSNGAG00000012599	-	100	67.209	Nannospalax_galili
ENSSTOG00000030994	-	100	80.273	ENSNGAG00000021929	Csde1	99	82.982	Nannospalax_galili
ENSSTOG00000030994	-	100	63.393	ENSNBRG00000020808	csde1	100	63.520	Neolamprologus_brichardi
ENSSTOG00000030994	-	100	80.307	ENSNLEG00000004842	CSDE1	97	80.307	Nomascus_leucogenys
ENSSTOG00000030994	-	98	73.794	ENSMEUG00000002677	CSDE1	100	73.794	Notamacropus_eugenii
ENSSTOG00000030994	-	98	78.571	ENSOPRG00000005002	CSDE1	82	78.571	Ochotona_princeps
ENSSTOG00000030994	-	100	79.777	ENSODEG00000007383	-	99	82.380	Octodon_degus
ENSSTOG00000030994	-	95	56.098	ENSODEG00000005979	-	98	56.098	Octodon_degus
ENSSTOG00000030994	-	100	61.697	ENSONIG00000009309	csde1	100	61.790	Oreochromis_niloticus
ENSSTOG00000030994	-	100	63.851	ENSOANG00000003346	-	100	63.851	Ornithorhynchus_anatinus
ENSSTOG00000030994	-	100	79.923	ENSOCUG00000016438	CSDE1	95	79.404	Oryctolagus_cuniculus
ENSSTOG00000030994	-	100	63.857	ENSORLG00000000707	csde1	100	63.857	Oryzias_latipes
ENSSTOG00000030994	-	100	63.478	ENSORLG00020005148	csde1	100	61.985	Oryzias_latipes_hni
ENSSTOG00000030994	-	100	63.857	ENSORLG00015019415	csde1	100	63.857	Oryzias_latipes_hsok
ENSSTOG00000030994	-	100	64.413	ENSOMEG00000015656	csde1	100	64.541	Oryzias_melastigma
ENSSTOG00000030994	-	100	80.691	ENSOGAG00000012127	CSDE1	94	80.691	Otolemur_garnettii
ENSSTOG00000030994	-	100	80.435	ENSOARG00000020034	CSDE1	94	80.435	Ovis_aries
ENSSTOG00000030994	-	100	80.435	ENSPPAG00000025861	CSDE1	100	80.435	Pan_paniscus
ENSSTOG00000030994	-	100	80.563	ENSPPRG00000006747	CSDE1	95	80.025	Panthera_pardus
ENSSTOG00000030994	-	100	80.563	ENSPTIG00000015468	CSDE1	100	80.025	Panthera_tigris_altaica
ENSSTOG00000030994	-	100	80.612	ENSPTRG00000033721	CSDE1	100	80.612	Pan_troglodytes
ENSSTOG00000030994	-	100	80.435	ENSPANG00000018873	CSDE1	100	80.435	Papio_anubis
ENSSTOG00000030994	-	100	64.387	ENSPKIG00000009459	csde1	100	64.387	Paramormyrops_kingsleyae
ENSSTOG00000030994	-	96	73.991	ENSPSIG00000003823	CSDE1	94	73.991	Pelodiscus_sinensis
ENSSTOG00000030994	-	100	64.158	ENSPMGG00000000772	csde1	100	64.158	Periophthalmus_magnuspinnatus
ENSSTOG00000030994	-	100	80.397	ENSPEMG00000020357	-	99	83.133	Peromyscus_maniculatus_bairdii
ENSSTOG00000030994	-	100	77.916	ENSPCIG00000022587	CSDE1	100	77.916	Phascolarctos_cinereus
ENSSTOG00000030994	-	97	63.608	ENSPFOG00000012664	csde1	100	63.608	Poecilia_formosa
ENSSTOG00000030994	-	93	59.231	ENSPLAG00000017680	csde1	93	59.231	Poecilia_latipinna
ENSSTOG00000030994	-	94	59.119	ENSPMEG00000005094	csde1	96	59.119	Poecilia_mexicana
ENSSTOG00000030994	-	100	63.086	ENSPREG00000011631	csde1	100	60.859	Poecilia_reticulata
ENSSTOG00000030994	-	100	79.901	ENSPPYG00000000996	CSDE1	100	79.901	Pongo_abelii
ENSSTOG00000030994	-	100	75.959	ENSPCAG00000014368	CSDE1	94	75.959	Procavia_capensis
ENSSTOG00000030994	-	68	73.783	ENSPCOG00000008223	-	91	73.783	Propithecus_coquereli
ENSSTOG00000030994	-	100	80.818	ENSPCOG00000017893	CSDE1	100	80.818	Propithecus_coquereli
ENSSTOG00000030994	-	100	75.192	ENSPVAG00000008225	CSDE1	95	75.192	Pteropus_vampyrus
ENSSTOG00000030994	-	100	63.393	ENSPNYG00000013745	csde1	100	63.520	Pundamilia_nyererei
ENSSTOG00000030994	-	100	63.312	ENSPNAG00000001958	csde1	100	63.312	Pygocentrus_nattereri
ENSSTOG00000030994	-	100	80.273	ENSRNOG00000061058	Csde1	100	80.273	Rattus_norvegicus
ENSSTOG00000030994	-	100	78.030	ENSRBIG00000038966	-	94	78.030	Rhinopithecus_bieti
ENSSTOG00000030994	-	100	81.462	ENSRBIG00000038088	-	99	83.926	Rhinopithecus_bieti
ENSSTOG00000030994	-	100	80.435	ENSRROG00000043101	CSDE1	98	82.701	Rhinopithecus_roxellana
ENSSTOG00000030994	-	100	80.179	ENSSBOG00000035592	CSDE1	95	80.179	Saimiri_boliviensis_boliviensis
ENSSTOG00000030994	-	100	78.261	ENSSHAG00000009831	CSDE1	100	78.261	Sarcophilus_harrisii
ENSSTOG00000030994	-	100	64.031	ENSSFOG00015007498	csde1	100	64.031	Scleropages_formosus
ENSSTOG00000030994	-	100	64.496	ENSSMAG00000007203	csde1	100	64.496	Scophthalmus_maximus
ENSSTOG00000030994	-	100	64.240	ENSSDUG00000015380	csde1	100	64.240	Seriola_dumerili
ENSSTOG00000030994	-	100	64.240	ENSSLDG00000008819	csde1	100	64.240	Seriola_lalandi_dorsalis
ENSSTOG00000030994	-	100	79.540	ENSSARG00000000738	CSDE1	94	79.540	Sorex_araneus
ENSSTOG00000030994	-	100	74.872	ENSSPUG00000008714	CSDE1	100	74.872	Sphenodon_punctatus
ENSSTOG00000030994	-	100	64.112	ENSSPAG00000000716	csde1	100	64.112	Stegastes_partitus
ENSSTOG00000030994	-	100	80.435	ENSSSCG00000006752	CSDE1	100	80.435	Sus_scrofa
ENSSTOG00000030994	-	100	74.069	ENSTGUG00000000972	CSDE1	100	74.069	Taeniopygia_guttata
ENSSTOG00000030994	-	100	62.100	ENSTRUG00000007996	csde1	100	62.100	Takifugu_rubripes
ENSSTOG00000030994	-	71	66.171	ENSTNIG00000010878	csde1	100	66.171	Tetraodon_nigroviridis
ENSSTOG00000030994	-	67	76.596	ENSTBEG00000011880	-	62	76.596	Tupaia_belangeri
ENSSTOG00000030994	-	100	79.923	ENSTTRG00000015583	CSDE1	94	79.923	Tursiops_truncatus
ENSSTOG00000030994	-	70	80.399	ENSUAMG00000021779	-	97	80.399	Ursus_americanus
ENSSTOG00000030994	-	80	76.115	ENSUAMG00000024289	-	99	76.115	Ursus_americanus
ENSSTOG00000030994	-	100	74.808	ENSUMAG00000009720	-	97	74.808	Ursus_maritimus
ENSSTOG00000030994	-	86	82.898	ENSUMAG00000011714	-	99	82.898	Ursus_maritimus
ENSSTOG00000030994	-	100	85.446	ENSVPAG00000000749	CSDE1	79	85.446	Vicugna_pacos
ENSSTOG00000030994	-	90	78.035	ENSVVUG00000009890	CSDE1	94	78.035	Vulpes_vulpes
ENSSTOG00000030994	-	100	69.468	ENSXETG00000021448	csde1	100	69.468	Xenopus_tropicalis
ENSSTOG00000030994	-	92	77.778	ENSXCOG00000000035	csde1	85	77.778	Xiphophorus_couchianus
ENSSTOG00000030994	-	100	63.648	ENSXMAG00000009080	csde1	100	61.882	Xiphophorus_maculatus