EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000032291 (Gene tree)
Gene ID: 101958259
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 49010 bases
Position: chrJH393294.1:17759872-17808881
Accession: 101958259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000025841	SpoU_methylase	PF00588.19	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000037170	TARBP1-201	4161	XM_005320411	ENSSTOP00000025841	1386 (aa)	XP_005320468	A0A287CX33

Gene Model

Click here to download ENSSTOG00000032291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000032291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000032291	TARBP1	99	76.208	ENSG00000059588	TARBP1	87	76.357	Homo_sapiens
ENSSTOG00000032291	TARBP1	96	44.234	ENSAPOG00000016419	si:dkey-85a20.4	83	44.444	Acanthochromis_polyacanthus
ENSSTOG00000032291	TARBP1	96	76.335	ENSAMEG00000003359	TARBP1	98	76.335	Ailuropoda_melanoleuca
ENSSTOG00000032291	TARBP1	96	45.468	ENSATEG00000020266	si:dkey-85a20.4	82	45.262	Anabas_testudineus
ENSSTOG00000032291	TARBP1	96	62.628	ENSAPLG00000007666	TARBP1	99	63.226	Anas_platyrhynchos
ENSSTOG00000032291	TARBP1	95	58.346	ENSACAG00000001142	TARBP1	83	58.227	Anolis_carolinensis
ENSSTOG00000032291	TARBP1	99	73.309	ENSANAG00000022031	TARBP1	90	73.457	Aotus_nancymaae
ENSSTOG00000032291	TARBP1	99	79.070	ENSBTAG00000004517	TARBP1	89	75.666	Bos_taurus
ENSSTOG00000032291	TARBP1	99	76.283	ENSCJAG00000018155	TARBP1	87	76.431	Callithrix_jacchus
ENSSTOG00000032291	TARBP1	97	76.124	ENSCAFG00000011533	TARBP1	95	76.689	Canis_familiaris
ENSSTOG00000032291	TARBP1	99	84.444	ENSCAFG00020027141	TARBP1	88	76.462	Canis_lupus_dingo
ENSSTOG00000032291	TARBP1	99	76.744	ENSCHIG00000011437	TARBP1	88	75.353	Capra_hircus
ENSSTOG00000032291	TARBP1	94	75.307	ENSTSYG00000010382	TARBP1	97	75.307	Carlito_syrichta
ENSSTOG00000032291	TARBP1	91	66.458	ENSCAPG00000010831	TARBP1	100	66.458	Cavia_aperea
ENSSTOG00000032291	TARBP1	99	75.037	ENSCPOG00000013995	TARBP1	89	75.037	Cavia_porcellus
ENSSTOG00000032291	TARBP1	99	76.357	ENSCCAG00000037278	TARBP1	87	76.506	Cebus_capucinus
ENSSTOG00000032291	TARBP1	99	84.444	ENSCATG00000011754	TARBP1	88	75.926	Cercocebus_atys
ENSSTOG00000032291	TARBP1	99	72.760	ENSCLAG00000003655	TARBP1	100	72.760	Chinchilla_lanigera
ENSSTOG00000032291	TARBP1	91	75.919	ENSCSAG00000010100	TARBP1	99	75.919	Chlorocebus_sabaeus
ENSSTOG00000032291	TARBP1	81	74.916	ENSCPBG00000005587	TARBP1	81	74.916	Chrysemys_picta_bellii
ENSSTOG00000032291	TARBP1	96	75.798	ENSCANG00000034343	TARBP1	99	75.798	Colobus_angolensis_palliatus
ENSSTOG00000032291	TARBP1	100	73.404	ENSCGRG00001016690	Tarbp1	93	73.404	Cricetulus_griseus_chok1gshd
ENSSTOG00000032291	TARBP1	99	73.404	ENSCGRG00000016893	Tarbp1	96	73.404	Cricetulus_griseus_crigri
ENSSTOG00000032291	TARBP1	96	42.109	ENSCSEG00000005255	si:dkey-85a20.4	82	42.109	Cynoglossus_semilaevis
ENSSTOG00000032291	TARBP1	98	45.797	ENSDARG00000079055	si:dkey-85a20.4	99	52.422	Danio_rerio
ENSSTOG00000032291	TARBP1	99	77.778	ENSDNOG00000008637	TARBP1	86	75.962	Dasypus_novemcinctus
ENSSTOG00000032291	TARBP1	93	72.798	ENSDORG00000007984	Tarbp1	100	72.720	Dipodomys_ordii
ENSSTOG00000032291	TARBP1	100	77.843	ENSEASG00005000252	TARBP1	88	77.827	Equus_asinus_asinus
ENSSTOG00000032291	TARBP1	100	78.042	ENSECAG00000023673	TARBP1	86	83.146	Equus_caballus
ENSSTOG00000032291	TARBP1	95	45.833	ENSELUG00000012193	si:dkey-85a20.4	83	45.614	Esox_lucius
ENSSTOG00000032291	TARBP1	99	82.222	ENSFCAG00000014183	TARBP1	87	73.205	Felis_catus
ENSSTOG00000032291	TARBP1	93	63.552	ENSFALG00000013565	TARBP1	99	63.336	Ficedula_albicollis
ENSSTOG00000032291	TARBP1	92	72.511	ENSFDAG00000001308	TARBP1	100	72.665	Fukomys_damarensis
ENSSTOG00000032291	TARBP1	96	39.560	ENSFHEG00000007565	si:dkey-85a20.4	73	53.611	Fundulus_heteroclitus
ENSSTOG00000032291	TARBP1	96	43.421	ENSGMOG00000004549	si:dkey-85a20.4	97	43.494	Gadus_morhua
ENSSTOG00000032291	TARBP1	92	69.900	ENSGALG00000011000	TARBP1	84	58.346	Gallus_gallus
ENSSTOG00000032291	TARBP1	96	44.787	ENSGAFG00000007387	si:dkey-85a20.4	82	44.371	Gambusia_affinis
ENSSTOG00000032291	TARBP1	96	45.208	ENSGACG00000005865	si:dkey-85a20.4	96	45.062	Gasterosteus_aculeatus
ENSSTOG00000032291	TARBP1	96	65.602	ENSGAGG00000012102	TARBP1	86	65.379	Gopherus_agassizii
ENSSTOG00000032291	TARBP1	96	73.887	ENSGGOG00000022879	TARBP1	98	74.036	Gorilla_gorilla
ENSSTOG00000032291	TARBP1	96	46.452	ENSHBUG00000008877	si:dkey-85a20.4	82	46.379	Haplochromis_burtoni
ENSSTOG00000032291	TARBP1	99	75.407	ENSHGLG00000011592	TARBP1	89	75.407	Heterocephalus_glaber_female
ENSSTOG00000032291	TARBP1	99	72.891	ENSHGLG00100015169	TARBP1	100	72.891	Heterocephalus_glaber_male
ENSSTOG00000032291	TARBP1	95	44.494	ENSIPUG00000005249	si:dkey-85a20.4	81	44.174	Ictalurus_punctatus
ENSSTOG00000032291	TARBP1	99	70.291	ENSJJAG00000017840	Tarbp1	99	70.222	Jaculus_jaculus
ENSSTOG00000032291	TARBP1	76	46.457	ENSKMAG00000017546	si:dkey-85a20.4	69	46.925	Kryptolebias_marmoratus
ENSSTOG00000032291	TARBP1	74	49.262	ENSLBEG00000012132	si:dkey-85a20.4	73	49.262	Labrus_bergylta
ENSSTOG00000032291	TARBP1	96	52.248	ENSLACG00000004337	TARBP1	83	52.100	Latimeria_chalumnae
ENSSTOG00000032291	TARBP1	96	50.595	ENSLOCG00000016214	si:dkey-85a20.4	82	50.595	Lepisosteus_oculatus
ENSSTOG00000032291	TARBP1	96	75.982	ENSLAFG00000011394	TARBP1	86	75.742	Loxodonta_africana
ENSSTOG00000032291	TARBP1	99	73.057	ENSMFAG00000041068	TARBP1	90	73.057	Macaca_fascicularis
ENSSTOG00000032291	TARBP1	99	73.057	ENSMMUG00000021703	TARBP1	87	73.057	Macaca_mulatta
ENSSTOG00000032291	TARBP1	99	75.852	ENSMNEG00000045002	TARBP1	88	75.852	Macaca_nemestrina
ENSSTOG00000032291	TARBP1	97	75.852	ENSMLEG00000044182	TARBP1	99	75.852	Mandrillus_leucophaeus
ENSSTOG00000032291	TARBP1	96	45.441	ENSMAMG00000021760	si:dkey-85a20.4	83	45.173	Mastacembelus_armatus
ENSSTOG00000032291	TARBP1	96	46.525	ENSMZEG00005005751	si:dkey-85a20.4	82	46.452	Maylandia_zebra
ENSSTOG00000032291	TARBP1	100	73.404	ENSMAUG00000020968	Tarbp1	94	73.404	Mesocricetus_auratus
ENSSTOG00000032291	TARBP1	99	84.444	ENSMICG00000015280	TARBP1	86	68.030	Microcebus_murinus
ENSSTOG00000032291	TARBP1	99	74.685	ENSMOCG00000004128	Tarbp1	89	74.537	Microtus_ochrogaster
ENSSTOG00000032291	TARBP1	95	44.363	ENSMMOG00000007795	si:dkey-85a20.4	82	44.068	Mola_mola
ENSSTOG00000032291	TARBP1	99	68.945	ENSMODG00000008504	TARBP1	85	68.871	Monodelphis_domestica
ENSSTOG00000032291	TARBP1	95	44.981	ENSMALG00000002916	si:dkey-85a20.4	83	44.981	Monopterus_albus
ENSSTOG00000032291	TARBP1	99	74.315	MGP_CAROLIEiJ_G0031729	Tarbp1	89	74.241	Mus_caroli
ENSSTOG00000032291	TARBP1	99	74.330	ENSMUSG00000090290	Tarbp1	89	74.256	Mus_musculus
ENSSTOG00000032291	TARBP1	99	74.610	MGP_PahariEiJ_G0023326	Tarbp1	90	74.462	Mus_pahari
ENSSTOG00000032291	TARBP1	99	74.405	MGP_SPRETEiJ_G0032846	Tarbp1	89	74.330	Mus_spretus
ENSSTOG00000032291	TARBP1	89	75.121	ENSMPUG00000002802	TARBP1	100	75.040	Mustela_putorius_furo
ENSSTOG00000032291	TARBP1	97	70.977	ENSMLUG00000002414	TARBP1	99	70.882	Myotis_lucifugus
ENSSTOG00000032291	TARBP1	99	76.729	ENSNLEG00000002518	TARBP1	87	76.877	Nomascus_leucogenys
ENSSTOG00000032291	TARBP1	62	69.851	ENSMEUG00000011370	-	56	69.851	Notamacropus_eugenii
ENSSTOG00000032291	TARBP1	81	76.771	ENSOPRG00000013822	TARBP1	69	76.771	Ochotona_princeps
ENSSTOG00000032291	TARBP1	99	79.545	ENSODEG00000005238	TARBP1	92	74.405	Octodon_degus
ENSSTOG00000032291	TARBP1	96	46.064	ENSONIG00000009789	si:dkey-85a20.4	96	45.985	Oreochromis_niloticus
ENSSTOG00000032291	TARBP1	99	84.444	ENSOCUG00000017418	TARBP1	89	75.610	Oryctolagus_cuniculus
ENSSTOG00000032291	TARBP1	96	43.279	ENSORLG00000010529	si:dkey-85a20.4	82	43.690	Oryzias_latipes
ENSSTOG00000032291	TARBP1	96	43.205	ENSORLG00020019264	si:dkey-85a20.4	82	43.395	Oryzias_latipes_hni
ENSSTOG00000032291	TARBP1	96	43.427	ENSORLG00015003276	si:dkey-85a20.4	82	43.542	Oryzias_latipes_hsok
ENSSTOG00000032291	TARBP1	99	73.333	ENSOGAG00000002379	TARBP1	88	73.333	Otolemur_garnettii
ENSSTOG00000032291	TARBP1	99	77.778	ENSOARG00000003434	TARBP1	94	75.037	Ovis_aries
ENSSTOG00000032291	TARBP1	96	76.431	ENSPPAG00000028097	TARBP1	99	76.580	Pan_paniscus
ENSSTOG00000032291	TARBP1	99	82.222	ENSPPRG00000013561	TARBP1	91	72.881	Panthera_pardus
ENSSTOG00000032291	TARBP1	96	75.428	ENSPTIG00000009281	TARBP1	100	75.428	Panthera_tigris_altaica
ENSSTOG00000032291	TARBP1	99	76.283	ENSPTRG00000002124	TARBP1	87	76.431	Pan_troglodytes
ENSSTOG00000032291	TARBP1	99	76.148	ENSPANG00000021933	TARBP1	88	76.148	Papio_anubis
ENSSTOG00000032291	TARBP1	96	47.353	ENSPKIG00000016716	si:dkey-85a20.4	82	47.353	Paramormyrops_kingsleyae
ENSSTOG00000032291	TARBP1	92	64.844	ENSPSIG00000010699	TARBP1	99	64.766	Pelodiscus_sinensis
ENSSTOG00000032291	TARBP1	99	76.506	ENSPEMG00000006888	Tarbp1	94	76.431	Peromyscus_maniculatus_bairdii
ENSSTOG00000032291	TARBP1	90	77.723	ENSPCIG00000029710	TARBP1	85	77.723	Phascolarctos_cinereus
ENSSTOG00000032291	TARBP1	96	44.623	ENSPFOG00000013020	si:dkey-85a20.4	96	44.729	Poecilia_formosa
ENSSTOG00000032291	TARBP1	96	44.656	ENSPLAG00000006044	si:dkey-85a20.4	82	44.762	Poecilia_latipinna
ENSSTOG00000032291	TARBP1	96	44.696	ENSPMEG00000017857	si:dkey-85a20.4	82	44.802	Poecilia_mexicana
ENSSTOG00000032291	TARBP1	96	44.835	ENSPREG00000022753	si:dkey-85a20.4	82	45.015	Poecilia_reticulata
ENSSTOG00000032291	TARBP1	89	88.660	ENSPPYG00000000102	TARBP1	87	88.660	Pongo_abelii
ENSSTOG00000032291	TARBP1	83	85.235	ENSPCAG00000004808	TARBP1	72	85.235	Procavia_capensis
ENSSTOG00000032291	TARBP1	99	75.556	ENSPCOG00000005666	TARBP1	87	73.680	Propithecus_coquereli
ENSSTOG00000032291	TARBP1	99	71.429	ENSPVAG00000014798	TARBP1	87	71.429	Pteropus_vampyrus
ENSSTOG00000032291	TARBP1	96	45.548	ENSPNYG00000019135	si:dkey-85a20.4	82	44.865	Pundamilia_nyererei
ENSSTOG00000032291	TARBP1	100	70.022	ENSRNOG00000053574	Tarbp1	89	69.948	Rattus_norvegicus
ENSSTOG00000032291	TARBP1	96	70.431	ENSRBIG00000043362	TARBP1	93	78.125	Rhinopithecus_bieti
ENSSTOG00000032291	TARBP1	99	84.444	ENSRROG00000029527	TARBP1	91	75.780	Rhinopithecus_roxellana
ENSSTOG00000032291	TARBP1	99	75.877	ENSSBOG00000034503	TARBP1	99	76.255	Saimiri_boliviensis_boliviensis
ENSSTOG00000032291	TARBP1	96	68.894	ENSSHAG00000000013	TARBP1	99	68.671	Sarcophilus_harrisii
ENSSTOG00000032291	TARBP1	96	44.978	ENSSFOG00015002660	si:dkey-85a20.4	97	45.251	Scleropages_formosus
ENSSTOG00000032291	TARBP1	96	45.928	ENSSMAG00000007081	si:dkey-85a20.4	81	46.075	Scophthalmus_maximus
ENSSTOG00000032291	TARBP1	96	44.174	ENSSDUG00000023566	si:dkey-85a20.4	82	44.092	Seriola_dumerili
ENSSTOG00000032291	TARBP1	98	45.682	ENSSLDG00000020200	si:dkey-85a20.4	85	45.468	Seriola_lalandi_dorsalis
ENSSTOG00000032291	TARBP1	92	76.977	ENSSARG00000012207	TARBP1	80	76.977	Sorex_araneus
ENSSTOG00000032291	TARBP1	96	62.333	ENSSPUG00000015364	TARBP1	83	62.407	Sphenodon_punctatus
ENSSTOG00000032291	TARBP1	96	44.964	ENSSPAG00000007213	si:dkey-85a20.4	82	45.095	Stegastes_partitus
ENSSTOG00000032291	TARBP1	95	87.273	ENSSSCG00000010160	TARBP1	87	87.273	Sus_scrofa
ENSSTOG00000032291	TARBP1	93	62.634	ENSTGUG00000010214	TARBP1	100	62.634	Taeniopygia_guttata
ENSSTOG00000032291	TARBP1	96	44.714	ENSTNIG00000016586	si:dkey-85a20.4	98	44.795	Tetraodon_nigroviridis
ENSSTOG00000032291	TARBP1	94	72.035	ENSTTRG00000008707	TARBP1	88	71.956	Tursiops_truncatus
ENSSTOG00000032291	TARBP1	95	75.922	ENSUMAG00000006730	TARBP1	99	75.922	Ursus_maritimus
ENSSTOG00000032291	TARBP1	75	85.135	ENSVPAG00000007665	TARBP1	73	85.135	Vicugna_pacos
ENSSTOG00000032291	TARBP1	97	76.575	ENSVVUG00000007460	TARBP1	100	78.445	Vulpes_vulpes
ENSSTOG00000032291	TARBP1	96	54.068	ENSXETG00000016224	tarbp1	99	53.920	Xenopus_tropicalis
ENSSTOG00000032291	TARBP1	89	46.887	ENSXCOG00000011779	si:dkey-85a20.4	89	47.962	Xiphophorus_couchianus
ENSSTOG00000032291	TARBP1	75	42.365	ENSXMAG00000009600	si:dkey-85a20.4	100	42.591	Xiphophorus_maculatus