EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000032538 (Gene tree)
Gene ID: 101977897
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 19131 bases
Position: chrJH393669.1:817298-836428
Accession: 101977897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027610	KH_1	PF00013.29	1.5e-06	1	1
ENSSTOP00000027610	DEAD	PF00270.29	2e-26	1	2
ENSSTOP00000027610	DEAD	PF00270.29	2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000040311	-	1491	XM_005341268	ENSSTOP00000027610	496 (aa)	XP_005341325	A0A287D275

Gene Model

Click here to download ENSSTOG00000032538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000032538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000032538	-	75	37.808	ENSSTOG00000013699	DDX17	60	37.808
ENSSTOG00000032538	-	63	30.607	ENSSTOG00000003645	DDX27	50	30.607
ENSSTOG00000032538	-	70	34.598	ENSSTOG00000004219	DDX23	54	34.598
ENSSTOG00000032538	-	70	32.547	ENSSTOG00000003171	DDX41	66	32.547
ENSSTOG00000032538	-	61	32.987	ENSSTOG00000008094	DDX3X	58	32.258
ENSSTOG00000032538	-	99	63.345	ENSSTOG00000027719	-	75	63.345
ENSSTOG00000032538	-	75	38.117	ENSSTOG00000012526	DDX5	71	38.117
ENSSTOG00000032538	-	78	35.870	ENSSTOG00000025564	DDX46	51	35.870
ENSSTOG00000032538	-	64	33.249	ENSSTOG00000021044	DDX4	56	33.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000032538	-	100	75.177	ENSAMEG00000007851	-	87	75.177	Ailuropoda_melanoleuca
ENSSTOG00000032538	-	100	70.893	ENSBTAG00000021814	-	87	70.893	Bos_taurus
ENSSTOG00000032538	-	100	67.496	ENSCAFG00020002717	-	86	67.496	Canis_lupus_dingo
ENSSTOG00000032538	-	100	73.535	ENSCAFG00020010029	-	87	73.535	Canis_lupus_dingo
ENSSTOG00000032538	-	100	71.071	ENSCHIG00000017351	-	87	71.071	Capra_hircus
ENSSTOG00000032538	-	88	69.323	ENSCAPG00000004247	-	100	69.323	Cavia_aperea
ENSSTOG00000032538	-	100	79.041	ENSCPOG00000003991	-	87	79.041	Cavia_porcellus
ENSSTOG00000032538	-	99	82.218	ENSCLAG00000010261	-	86	82.319	Chinchilla_lanigera
ENSSTOG00000032538	-	66	74.074	ENSCHOG00000003450	-	63	74.074	Choloepus_hoffmanni
ENSSTOG00000032538	-	100	81.350	ENSCGRG00001001145	Ddx43	87	81.350	Cricetulus_griseus_chok1gshd
ENSSTOG00000032538	-	100	81.495	ENSCGRG00000010217	Ddx43	100	81.495	Cricetulus_griseus_crigri
ENSSTOG00000032538	-	100	75.887	ENSDNOG00000017589	-	87	75.887	Dasypus_novemcinctus
ENSSTOG00000032538	-	100	79.396	ENSDORG00000030010	Ddx43	87	79.396	Dipodomys_ordii
ENSSTOG00000032538	-	74	82.119	ENSETEG00000001887	-	62	82.119	Echinops_telfairi
ENSSTOG00000032538	-	99	77.265	ENSEASG00005004346	-	80	77.265	Equus_asinus_asinus
ENSSTOG00000032538	-	99	77.265	ENSECAG00000017971	DDX43	88	77.265	Equus_caballus
ENSSTOG00000032538	-	100	71.936	ENSFCAG00000031631	-	87	71.936	Felis_catus
ENSSTOG00000032538	-	100	76.199	ENSHGLG00000001118	-	100	76.199	Heterocephalus_glaber_female
ENSSTOG00000032538	-	100	76.199	ENSHGLG00100011895	-	88	76.199	Heterocephalus_glaber_male
ENSSTOG00000032538	-	100	78.863	ENSJJAG00000014184	Ddx43	87	78.863	Jaculus_jaculus
ENSSTOG00000032538	-	100	77.345	ENSLAFG00000012755	-	93	77.345	Loxodonta_africana
ENSSTOG00000032538	-	100	80.284	ENSMAUG00000001441	Ddx43	87	80.284	Mesocricetus_auratus
ENSSTOG00000032538	-	100	80.462	ENSMOCG00000012956	Ddx43	87	80.462	Microtus_ochrogaster
ENSSTOG00000032538	-	100	80.284	MGP_CAROLIEiJ_G0032467	Ddx43	87	80.284	Mus_caroli
ENSSTOG00000032538	-	100	80.817	ENSMUSG00000070291	Ddx43	87	80.817	Mus_musculus
ENSSTOG00000032538	-	88	80.952	MGP_PahariEiJ_G0015333	Ddx43	86	80.952	Mus_pahari
ENSSTOG00000032538	-	100	80.817	MGP_SPRETEiJ_G0033607	Ddx43	87	80.817	Mus_spretus
ENSSTOG00000032538	-	100	75.709	ENSMPUG00000004342	-	87	75.709	Mustela_putorius_furo
ENSSTOG00000032538	-	100	76.283	ENSMLUG00000017604	-	87	76.283	Myotis_lucifugus
ENSSTOG00000032538	-	100	79.574	ENSNGAG00000015102	Ddx43	87	79.574	Nannospalax_galili
ENSSTOG00000032538	-	84	89.286	ENSOPRG00000013523	-	81	89.286	Ochotona_princeps
ENSSTOG00000032538	-	96	75.551	ENSODEG00000016207	-	99	75.551	Octodon_degus
ENSSTOG00000032538	-	100	73.712	ENSOCUG00000006338	-	87	73.712	Oryctolagus_cuniculus
ENSSTOG00000032538	-	98	61.722	ENSOCUG00000025811	-	85	61.722	Oryctolagus_cuniculus
ENSSTOG00000032538	-	100	71.071	ENSOARG00000010873	-	87	71.071	Ovis_aries
ENSSTOG00000032538	-	100	71.936	ENSPTIG00000017842	-	87	71.936	Panthera_tigris_altaica
ENSSTOG00000032538	-	100	80.995	ENSPEMG00000023986	Ddx43	100	80.995	Peromyscus_maniculatus_bairdii
ENSSTOG00000032538	-	99	75.133	ENSPCAG00000005962	-	87	75.133	Procavia_capensis
ENSSTOG00000032538	-	100	77.128	ENSPVAG00000012718	-	99	77.128	Pteropus_vampyrus
ENSSTOG00000032538	-	100	80.639	ENSRNOG00000050868	Ddx43	87	80.639	Rattus_norvegicus
ENSSTOG00000032538	-	96	75.868	ENSSARG00000013493	-	99	75.868	Sorex_araneus
ENSSTOG00000032538	-	100	72.500	ENSSSCG00000004287	-	87	72.500	Sus_scrofa
ENSSTOG00000032538	-	100	65.709	ENSTTRG00000001488	-	99	65.709	Tursiops_truncatus
ENSSTOG00000032538	-	78	70.199	ENSUAMG00000012894	-	70	70.199	Ursus_americanus
ENSSTOG00000032538	-	100	75.000	ENSUMAG00000012291	-	87	75.000	Ursus_maritimus
ENSSTOG00000032538	-	93	65.259	ENSVPAG00000004969	-	86	65.259	Vicugna_pacos
ENSSTOG00000032538	-	100	73.357	ENSVVUG00000013908	-	87	73.357	Vulpes_vulpes