EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000032722 (Gene tree)
Gene ID: 101962608
Gene Symbol: -
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 18028 bases
Position: chrJH393437.1:85909-103936
Accession: 101962608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000032310	CSD	PF00313.22	5.8e-53	1	3
ENSSTOP00000032310	CSD	PF00313.22	5.8e-53	2	3
ENSSTOP00000032310	CSD	PF00313.22	5.8e-53	3	3
ENSSTOP00000031051	CSD	PF00313.22	9.2e-53	1	3
ENSSTOP00000031051	CSD	PF00313.22	9.2e-53	2	3
ENSSTOP00000031051	CSD	PF00313.22	9.2e-53	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000042774	-	1668	XM_013362675	ENSSTOP00000031051	555 (aa)	XP_013218129	A0A287DC34
ENSSTOT00000030749	-	1575	-	ENSSTOP00000032310	524 (aa)	-	A0A287DFK1

Gene Model

Click here to download ENSSTOG00000032722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000032722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000032722	-	98	61.203	ENSSTOG00000030994	-	84	61.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000032722	-	98	82.460	ENSG00000009307	CSDE1	100	100.000	Homo_sapiens
ENSSTOG00000032722	-	99	56.830	ENSAPOG00000015538	csde1	93	56.830	Acanthochromis_polyacanthus
ENSSTOG00000032722	-	98	80.645	ENSAMEG00000017129	CSDE1	80	80.645	Ailuropoda_melanoleuca
ENSSTOG00000032722	-	75	59.561	ENSACIG00000015175	csde1	99	59.561	Amphilophus_citrinellus
ENSSTOG00000032722	-	99	56.830	ENSAOCG00000011510	csde1	93	56.830	Amphiprion_ocellaris
ENSSTOG00000032722	-	99	57.372	ENSAPEG00000007194	csde1	93	56.830	Amphiprion_percula
ENSSTOG00000032722	-	98	65.298	ENSATEG00000003864	csde1	85	65.298	Anabas_testudineus
ENSSTOG00000032722	-	98	76.282	ENSAPLG00000008797	CSDE1	92	76.282	Anas_platyrhynchos
ENSSTOG00000032722	-	98	77.756	ENSACAG00000003120	CSDE1	86	77.756	Anolis_carolinensis
ENSSTOG00000032722	-	98	82.258	ENSANAG00000024665	CSDE1	86	82.258	Aotus_nancymaae
ENSSTOG00000032722	-	77	69.167	ENSANAG00000028396	-	89	70.238	Aotus_nancymaae
ENSSTOG00000032722	-	98	65.637	ENSACLG00000013296	csde1	90	65.503	Astatotilapia_calliptera
ENSSTOG00000032722	-	98	66.049	ENSAMXG00000007436	csde1	92	66.049	Astyanax_mexicanus
ENSSTOG00000032722	-	98	81.653	ENSBTAG00000000678	CSDE1	84	81.653	Bos_taurus
ENSSTOG00000032722	-	94	92.308	ENSCJAG00000012565	CSDE1	79	92.308	Callithrix_jacchus
ENSSTOG00000032722	-	98	81.290	ENSCAFG00000009618	CSDE1	88	81.290	Canis_familiaris
ENSSTOG00000032722	-	98	81.290	ENSCAFG00020000481	CSDE1	92	81.290	Canis_lupus_dingo
ENSSTOG00000032722	-	98	81.653	ENSCHIG00000017250	CSDE1	84	81.653	Capra_hircus
ENSSTOG00000032722	-	98	91.608	ENSTSYG00000003747	CSDE1	92	91.608	Carlito_syrichta
ENSSTOG00000032722	-	98	68.346	ENSCAPG00000015128	CSDE1	86	68.346	Cavia_aperea
ENSSTOG00000032722	-	98	93.007	ENSCPOG00000040388	CSDE1	92	93.007	Cavia_porcellus
ENSSTOG00000032722	-	93	54.517	ENSCCAG00000030878	-	79	54.517	Cebus_capucinus
ENSSTOG00000032722	-	98	82.460	ENSCCAG00000036794	CSDE1	99	70.199	Cebus_capucinus
ENSSTOG00000032722	-	94	75.524	ENSCCAG00000033677	-	89	75.524	Cebus_capucinus
ENSSTOG00000032722	-	94	93.007	ENSCATG00000036962	CSDE1	77	100.000	Cercocebus_atys
ENSSTOG00000032722	-	98	93.007	ENSCLAG00000006618	CSDE1	90	93.007	Chinchilla_lanigera
ENSSTOG00000032722	-	98	82.460	ENSCSAG00000001658	CSDE1	86	82.460	Chlorocebus_sabaeus
ENSSTOG00000032722	-	98	75.208	ENSCHOG00000000918	CSDE1	84	75.208	Choloepus_hoffmanni
ENSSTOG00000032722	-	99	69.744	ENSCPBG00000016547	CSDE1	92	68.051	Chrysemys_picta_bellii
ENSSTOG00000032722	-	95	38.645	ENSCING00000014465	-	87	38.645	Ciona_intestinalis
ENSSTOG00000032722	-	97	38.771	ENSCSAVG00000008100	-	87	35.382	Ciona_savignyi
ENSSTOG00000032722	-	95	89.706	ENSCANG00000031069	-	93	89.706	Colobus_angolensis_palliatus
ENSSTOG00000032722	-	94	93.007	ENSCANG00000035096	CSDE1	77	100.000	Colobus_angolensis_palliatus
ENSSTOG00000032722	-	97	66.113	ENSCGRG00001014011	-	84	66.113	Cricetulus_griseus_chok1gshd
ENSSTOG00000032722	-	98	82.863	ENSCGRG00001016833	-	86	82.863	Cricetulus_griseus_chok1gshd
ENSSTOG00000032722	-	94	82.993	ENSCGRG00000002225	-	86	82.993	Cricetulus_griseus_crigri
ENSSTOG00000032722	-	97	65.499	ENSCGRG00000005831	-	83	65.499	Cricetulus_griseus_crigri
ENSSTOG00000032722	-	99	66.434	ENSCSEG00000002620	csde1	93	66.434	Cynoglossus_semilaevis
ENSSTOG00000032722	-	98	60.508	ENSCVAG00000001344	csde1	90	60.140	Cyprinodon_variegatus
ENSSTOG00000032722	-	98	66.602	ENSDARG00000074758	csde1	99	74.101	Danio_rerio
ENSSTOG00000032722	-	98	81.330	ENSDNOG00000010287	-	85	81.330	Dasypus_novemcinctus
ENSSTOG00000032722	-	87	51.460	ENSDNOG00000034464	-	85	51.759	Dasypus_novemcinctus
ENSSTOG00000032722	-	98	82.258	ENSDORG00000011609	Csde1	86	82.258	Dipodomys_ordii
ENSSTOG00000032722	-	97	43.396	FBgn0263352	Unr	69	40.984	Drosophila_melanogaster
ENSSTOG00000032722	-	98	69.853	ENSETEG00000013678	-	78	69.853	Echinops_telfairi
ENSSTOG00000032722	-	94	66.451	ENSETEG00000006280	-	100	66.451	Echinops_telfairi
ENSSTOG00000032722	-	89	95.833	ENSETEG00000002491	-	67	90.909	Echinops_telfairi
ENSSTOG00000032722	-	68	65.891	ENSETEG00000007109	-	71	65.891	Echinops_telfairi
ENSSTOG00000032722	-	98	52.055	ENSEBUG00000008647	csde1	92	52.055	Eptatretus_burgeri
ENSSTOG00000032722	-	98	82.056	ENSEASG00005006284	CSDE1	92	80.860	Equus_asinus_asinus
ENSSTOG00000032722	-	98	82.056	ENSECAG00000020885	CSDE1	92	80.860	Equus_caballus
ENSSTOG00000032722	-	98	94.891	ENSEEUG00000006286	CSDE1	66	94.891	Erinaceus_europaeus
ENSSTOG00000032722	-	98	64.549	ENSELUG00000015507	csde1	90	64.549	Esox_lucius
ENSSTOG00000032722	-	98	82.460	ENSFCAG00000029266	CSDE1	92	81.290	Felis_catus
ENSSTOG00000032722	-	98	77.956	ENSFALG00000003407	CSDE1	86	77.956	Ficedula_albicollis
ENSSTOG00000032722	-	98	82.863	ENSFDAG00000007882	CSDE1	86	82.863	Fukomys_damarensis
ENSSTOG00000032722	-	98	60.508	ENSFHEG00000010799	csde1	91	60.140	Fundulus_heteroclitus
ENSSTOG00000032722	-	98	65.243	ENSGMOG00000012731	csde1	93	65.243	Gadus_morhua
ENSSTOG00000032722	-	98	77.756	ENSGALG00000002139	CSDE1	86	77.756	Gallus_gallus
ENSSTOG00000032722	-	99	61.111	ENSGAFG00000005241	csde1	95	61.111	Gambusia_affinis
ENSSTOG00000032722	-	98	60.853	ENSGACG00000004544	csde1	93	60.853	Gasterosteus_aculeatus
ENSSTOG00000032722	-	99	69.231	ENSGAGG00000017685	CSDE1	86	69.231	Gopherus_agassizii
ENSSTOG00000032722	-	98	82.460	ENSGGOG00000002164	CSDE1	92	81.290	Gorilla_gorilla
ENSSTOG00000032722	-	98	65.503	ENSHBUG00000020315	csde1	90	65.503	Haplochromis_burtoni
ENSSTOG00000032722	-	98	65.665	ENSHGLG00000007471	-	85	65.665	Heterocephalus_glaber_female
ENSSTOG00000032722	-	98	77.554	ENSHGLG00000000650	-	83	77.554	Heterocephalus_glaber_female
ENSSTOG00000032722	-	97	77.250	ENSHGLG00000009620	-	81	77.087	Heterocephalus_glaber_female
ENSSTOG00000032722	-	98	75.054	ENSHGLG00000003829	-	90	75.054	Heterocephalus_glaber_female
ENSSTOG00000032722	-	96	80.952	ENSHGLG00000010039	-	86	80.952	Heterocephalus_glaber_female
ENSSTOG00000032722	-	97	72.958	ENSHGLG00000008555	-	84	72.958	Heterocephalus_glaber_female
ENSSTOG00000032722	-	98	66.563	ENSHGLG00000019549	-	84	66.563	Heterocephalus_glaber_female
ENSSTOG00000032722	-	98	66.372	ENSHGLG00100004195	-	96	62.112	Heterocephalus_glaber_male
ENSSTOG00000032722	-	96	51.140	ENSHGLG00100004833	-	86	51.140	Heterocephalus_glaber_male
ENSSTOG00000032722	-	98	63.843	ENSHGLG00100007287	-	85	71.613	Heterocephalus_glaber_male
ENSSTOG00000032722	-	98	70.108	ENSHGLG00100012072	-	94	70.108	Heterocephalus_glaber_male
ENSSTOG00000032722	-	96	80.272	ENSHGLG00100006910	-	86	80.272	Heterocephalus_glaber_male
ENSSTOG00000032722	-	98	83.065	ENSHGLG00100019438	-	92	81.935	Heterocephalus_glaber_male
ENSSTOG00000032722	-	98	77.831	ENSHGLG00100002245	-	84	77.831	Heterocephalus_glaber_male
ENSSTOG00000032722	-	98	67.637	ENSHGLG00100001846	-	88	67.637	Heterocephalus_glaber_male
ENSSTOG00000032722	-	99	62.238	ENSHCOG00000004158	csde1	90	62.238	Hippocampus_comes
ENSSTOG00000032722	-	98	58.929	ENSIPUG00000000355	csde1	93	58.929	Ictalurus_punctatus
ENSSTOG00000032722	-	98	82.258	ENSJJAG00000019571	Csde1	86	82.258	Jaculus_jaculus
ENSSTOG00000032722	-	98	59.191	ENSKMAG00000005685	csde1	92	55.137	Kryptolebias_marmoratus
ENSSTOG00000032722	-	99	62.937	ENSLBEG00000014770	csde1	93	62.937	Labrus_bergylta
ENSSTOG00000032722	-	97	64.746	ENSLACG00000018452	CSDE1	85	64.746	Latimeria_chalumnae
ENSSTOG00000032722	-	98	65.035	ENSLOCG00000010413	csde1	87	58.503	Lepisosteus_oculatus
ENSSTOG00000032722	-	98	80.860	ENSLAFG00000007150	CSDE1	88	80.860	Loxodonta_africana
ENSSTOG00000032722	-	94	93.007	ENSMFAG00000003674	CSDE1	77	100.000	Macaca_fascicularis
ENSSTOG00000032722	-	98	82.460	ENSMMUG00000001974	CSDE1	99	81.290	Macaca_mulatta
ENSSTOG00000032722	-	94	93.007	ENSMNEG00000045247	CSDE1	77	100.000	Macaca_nemestrina
ENSSTOG00000032722	-	98	82.460	ENSMLEG00000038673	CSDE1	77	100.000	Mandrillus_leucophaeus
ENSSTOG00000032722	-	98	65.298	ENSMAMG00000008821	csde1	90	65.298	Mastacembelus_armatus
ENSSTOG00000032722	-	98	65.503	ENSMZEG00005021675	csde1	90	65.503	Maylandia_zebra
ENSSTOG00000032722	-	98	77.555	ENSMGAG00000016381	CSDE1	92	76.068	Meleagris_gallopavo
ENSSTOG00000032722	-	98	82.863	ENSMAUG00000014031	Csde1	86	82.863	Mesocricetus_auratus
ENSSTOG00000032722	-	94	93.007	ENSMICG00000002050	CSDE1	83	93.007	Microcebus_murinus
ENSSTOG00000032722	-	98	82.863	ENSMOCG00000018960	Csde1	86	82.863	Microtus_ochrogaster
ENSSTOG00000032722	-	99	57.336	ENSMMOG00000015075	csde1	93	57.336	Mola_mola
ENSSTOG00000032722	-	99	91.608	ENSMODG00000004685	CSDE1	92	91.608	Monodelphis_domestica
ENSSTOG00000032722	-	99	63.636	ENSMALG00000007132	csde1	93	56.492	Monopterus_albus
ENSSTOG00000032722	-	98	82.863	MGP_CAROLIEiJ_G0025444	Csde1	90	98.750	Mus_caroli
ENSSTOG00000032722	-	98	82.863	ENSMUSG00000068823	Csde1	89	98.750	Mus_musculus
ENSSTOG00000032722	-	98	82.863	MGP_PahariEiJ_G0026888	Csde1	90	98.750	Mus_pahari
ENSSTOG00000032722	-	98	82.863	MGP_SPRETEiJ_G0026394	Csde1	90	98.750	Mus_spretus
ENSSTOG00000032722	-	98	82.460	ENSMPUG00000005753	CSDE1	94	76.210	Mustela_putorius_furo
ENSSTOG00000032722	-	98	80.860	ENSMLUG00000005681	CSDE1	87	80.860	Myotis_lucifugus
ENSSTOG00000032722	-	98	82.661	ENSNGAG00000021929	Csde1	86	82.661	Nannospalax_galili
ENSSTOG00000032722	-	93	74.468	ENSNGAG00000012599	-	82	74.468	Nannospalax_galili
ENSSTOG00000032722	-	98	65.503	ENSNBRG00000020808	csde1	90	65.503	Neolamprologus_brichardi
ENSSTOG00000032722	-	98	82.258	ENSNLEG00000004842	CSDE1	89	81.075	Nomascus_leucogenys
ENSSTOG00000032722	-	98	92.308	ENSMEUG00000002677	CSDE1	94	92.308	Notamacropus_eugenii
ENSSTOG00000032722	-	98	92.308	ENSOPRG00000005002	CSDE1	75	92.308	Ochotona_princeps
ENSSTOG00000032722	-	98	82.056	ENSODEG00000007383	-	86	82.056	Octodon_degus
ENSSTOG00000032722	-	93	48.649	ENSODEG00000005979	-	74	48.649	Octodon_degus
ENSSTOG00000032722	-	98	63.315	ENSONIG00000009309	csde1	90	59.626	Oreochromis_niloticus
ENSSTOG00000032722	-	99	81.633	ENSOANG00000003346	-	75	81.633	Ornithorhynchus_anatinus
ENSSTOG00000032722	-	98	81.653	ENSOCUG00000016438	CSDE1	92	75.403	Oryctolagus_cuniculus
ENSSTOG00000032722	-	99	56.492	ENSORLG00000000707	csde1	93	56.492	Oryzias_latipes
ENSSTOG00000032722	-	99	57.051	ENSORLG00020005148	csde1	93	55.365	Oryzias_latipes_hni
ENSSTOG00000032722	-	99	57.051	ENSORLG00015019415	csde1	93	56.492	Oryzias_latipes_hsok
ENSSTOG00000032722	-	98	64.479	ENSOMEG00000015656	csde1	93	64.271	Oryzias_melastigma
ENSSTOG00000032722	-	98	81.290	ENSOGAG00000012127	CSDE1	87	81.290	Otolemur_garnettii
ENSSTOG00000032722	-	98	80.645	ENSOARG00000020034	CSDE1	80	80.645	Ovis_aries
ENSSTOG00000032722	-	94	93.007	ENSPPAG00000025861	CSDE1	92	81.290	Pan_paniscus
ENSSTOG00000032722	-	98	82.460	ENSPPRG00000006747	CSDE1	87	81.290	Panthera_pardus
ENSSTOG00000032722	-	98	82.460	ENSPTIG00000015468	CSDE1	86	82.460	Panthera_tigris_altaica
ENSSTOG00000032722	-	94	93.007	ENSPTRG00000033721	CSDE1	79	93.007	Pan_troglodytes
ENSSTOG00000032722	-	98	82.460	ENSPANG00000018873	CSDE1	77	100.000	Papio_anubis
ENSSTOG00000032722	-	98	66.806	ENSPKIG00000009459	csde1	85	66.806	Paramormyrops_kingsleyae
ENSSTOG00000032722	-	99	80.353	ENSPSIG00000003823	CSDE1	96	80.353	Pelodiscus_sinensis
ENSSTOG00000032722	-	98	65.164	ENSPMGG00000000772	csde1	90	61.272	Periophthalmus_magnuspinnatus
ENSSTOG00000032722	-	98	82.661	ENSPEMG00000020357	-	86	82.661	Peromyscus_maniculatus_bairdii
ENSSTOG00000032722	-	99	92.308	ENSPCIG00000022587	CSDE1	92	92.308	Phascolarctos_cinereus
ENSSTOG00000032722	-	98	60.839	ENSPFOG00000012664	csde1	89	60.839	Poecilia_formosa
ENSSTOG00000032722	-	98	60.839	ENSPLAG00000017680	csde1	84	60.839	Poecilia_latipinna
ENSSTOG00000032722	-	98	60.839	ENSPMEG00000005094	csde1	85	60.839	Poecilia_mexicana
ENSSTOG00000032722	-	99	60.140	ENSPREG00000011631	csde1	92	56.894	Poecilia_reticulata
ENSSTOG00000032722	-	98	82.258	ENSPPYG00000000996	CSDE1	86	82.258	Pongo_abelii
ENSSTOG00000032722	-	98	77.849	ENSPCAG00000014368	CSDE1	87	77.849	Procavia_capensis
ENSSTOG00000032722	-	99	82.460	ENSPCOG00000017893	CSDE1	99	81.651	Propithecus_coquereli
ENSSTOG00000032722	-	76	64.368	ENSPCOG00000008223	-	88	64.368	Propithecus_coquereli
ENSSTOG00000032722	-	98	93.007	ENSPVAG00000008225	CSDE1	90	93.007	Pteropus_vampyrus
ENSSTOG00000032722	-	98	65.503	ENSPNYG00000013745	csde1	90	65.503	Pundamilia_nyererei
ENSSTOG00000032722	-	98	66.731	ENSPNAG00000001958	csde1	90	66.461	Pygocentrus_nattereri
ENSSTOG00000032722	-	98	82.661	ENSRNOG00000061058	Csde1	86	82.661	Rattus_norvegicus
ENSSTOG00000032722	-	98	77.419	ENSRBIG00000038088	-	92	76.395	Rhinopithecus_bieti
ENSSTOG00000032722	-	98	93.007	ENSRBIG00000038966	-	87	93.007	Rhinopithecus_bieti
ENSSTOG00000032722	-	94	93.007	ENSRROG00000043101	CSDE1	84	93.007	Rhinopithecus_roxellana
ENSSTOG00000032722	-	98	82.460	ENSSBOG00000035592	CSDE1	86	82.460	Saimiri_boliviensis_boliviensis
ENSSTOG00000032722	-	98	91.608	ENSSHAG00000009831	CSDE1	92	91.608	Sarcophilus_harrisii
ENSSTOG00000032722	-	99	63.636	ENSSFOG00015007498	csde1	85	63.636	Scleropages_formosus
ENSSTOG00000032722	-	98	65.734	ENSSMAG00000007203	csde1	89	65.734	Scophthalmus_maximus
ENSSTOG00000032722	-	99	56.830	ENSSDUG00000015380	csde1	93	56.830	Seriola_dumerili
ENSSTOG00000032722	-	99	57.372	ENSSLDG00000008819	csde1	93	56.830	Seriola_lalandi_dorsalis
ENSSTOG00000032722	-	98	92.308	ENSSARG00000000738	CSDE1	86	92.308	Sorex_araneus
ENSSTOG00000032722	-	98	78.156	ENSSPUG00000008714	CSDE1	92	76.709	Sphenodon_punctatus
ENSSTOG00000032722	-	99	62.238	ENSSPAG00000000716	csde1	93	62.238	Stegastes_partitus
ENSSTOG00000032722	-	98	82.258	ENSSSCG00000006752	CSDE1	96	81.075	Sus_scrofa
ENSSTOG00000032722	-	98	77.645	ENSTGUG00000000972	CSDE1	86	77.645	Taeniopygia_guttata
ENSSTOG00000032722	-	98	63.655	ENSTRUG00000007996	csde1	92	63.655	Takifugu_rubripes
ENSSTOG00000032722	-	97	77.992	ENSTNIG00000010878	csde1	100	77.992	Tetraodon_nigroviridis
ENSSTOG00000032722	-	98	80.645	ENSTTRG00000015583	CSDE1	85	80.645	Tursiops_truncatus
ENSSTOG00000032722	-	97	76.049	ENSUAMG00000024289	-	95	76.049	Ursus_americanus
ENSSTOG00000032722	-	77	76.471	ENSUAMG00000021779	-	99	76.129	Ursus_americanus
ENSSTOG00000032722	-	98	75.914	ENSUMAG00000009720	-	84	75.914	Ursus_maritimus
ENSSTOG00000032722	-	94	93.007	ENSUMAG00000011714	-	84	93.007	Ursus_maritimus
ENSSTOG00000032722	-	96	92.929	ENSVPAG00000000749	CSDE1	68	92.929	Vicugna_pacos
ENSSTOG00000032722	-	98	82.460	ENSVVUG00000009890	CSDE1	94	82.460	Vulpes_vulpes
ENSSTOG00000032722	-	98	73.800	ENSXETG00000021448	csde1	86	73.800	Xenopus_tropicalis
ENSSTOG00000032722	-	77	69.111	ENSXCOG00000000035	csde1	97	69.111	Xiphophorus_couchianus
ENSSTOG00000032722	-	99	61.538	ENSXMAG00000009080	csde1	90	61.538	Xiphophorus_maculatus