EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000033099 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1117 bases
Position: chrJH393283.1:26526431-26527547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027782	RTC	PF01137.21	3.8e-72	1	1
ENSSTOP00000027782	RTC_insert	PF05189.13	8.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000034780	-	1050	-	ENSSTOP00000027782	349 (aa)	-	A0A287D2N1

Gene Model

Click here to download ENSSTOG00000033099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000033099's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000033099	-	100	80.926	ENSSTOG00000013528	-	100	80.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000033099	-	100	83.106	ENSG00000137996	RTCA	100	83.106	Homo_sapiens
ENSSTOG00000033099	-	100	62.568	ENSAPOG00000001345	rtca	99	62.568	Acanthochromis_polyacanthus
ENSSTOG00000033099	-	72	83.643	ENSAMEG00000008855	RTCA	100	83.643	Ailuropoda_melanoleuca
ENSSTOG00000033099	-	100	62.842	ENSACIG00000019643	rtca	100	62.842	Amphilophus_citrinellus
ENSSTOG00000033099	-	100	62.568	ENSAOCG00000014979	rtca	99	62.568	Amphiprion_ocellaris
ENSSTOG00000033099	-	100	62.568	ENSAPEG00000006945	rtca	99	62.568	Amphiprion_percula
ENSSTOG00000033099	-	100	61.475	ENSATEG00000006315	rtca	100	61.475	Anabas_testudineus
ENSSTOG00000033099	-	95	69.972	ENSAPLG00000015430	RTCA	99	69.972	Anas_platyrhynchos
ENSSTOG00000033099	-	100	82.561	ENSANAG00000025446	RTCA	100	82.561	Aotus_nancymaae
ENSSTOG00000033099	-	100	62.022	ENSACLG00000020770	rtca	99	62.022	Astatotilapia_calliptera
ENSSTOG00000033099	-	100	63.934	ENSAMXG00000043271	rtca	100	63.934	Astyanax_mexicanus
ENSSTOG00000033099	-	100	83.379	ENSBTAG00000006321	RTCA	100	83.379	Bos_taurus
ENSSTOG00000033099	-	100	82.561	ENSCJAG00000003398	RTCA	100	82.561	Callithrix_jacchus
ENSSTOG00000033099	-	100	83.651	ENSCAFG00000020010	RTCA	68	83.651	Canis_familiaris
ENSSTOG00000033099	-	100	83.651	ENSCAFG00020011528	RTCA	57	83.651	Canis_lupus_dingo
ENSSTOG00000033099	-	100	83.106	ENSCHIG00000018937	RTCA	100	83.106	Capra_hircus
ENSSTOG00000033099	-	100	82.561	ENSTSYG00000011305	RTCA	100	82.561	Carlito_syrichta
ENSSTOG00000033099	-	100	82.289	ENSCCAG00000021844	RTCA	100	82.289	Cebus_capucinus
ENSSTOG00000033099	-	100	80.526	ENSCATG00000019364	RTCA	100	84.142	Cercocebus_atys
ENSSTOG00000033099	-	86	84.810	ENSCLAG00000006125	RTCA	100	84.810	Chinchilla_lanigera
ENSSTOG00000033099	-	100	83.379	ENSCSAG00000001509	RTCA	100	83.379	Chlorocebus_sabaeus
ENSSTOG00000033099	-	100	81.744	ENSCHOG00000005211	RTCA	100	81.744	Choloepus_hoffmanni
ENSSTOG00000033099	-	100	72.678	ENSCPBG00000026658	RTCA	100	72.678	Chrysemys_picta_bellii
ENSSTOG00000033099	-	99	50.411	ENSCING00000007875	-	99	50.411	Ciona_intestinalis
ENSSTOG00000033099	-	98	50.000	ENSCSAVG00000007269	-	98	50.000	Ciona_savignyi
ENSSTOG00000033099	-	100	83.106	ENSCANG00000040106	RTCA	100	83.106	Colobus_angolensis_palliatus
ENSSTOG00000033099	-	72	81.413	ENSCGRG00001013163	Rtca	85	81.413	Cricetulus_griseus_chok1gshd
ENSSTOG00000033099	-	98	60.833	ENSCSEG00000000530	rtca	96	60.833	Cynoglossus_semilaevis
ENSSTOG00000033099	-	100	51.771	ENSCVAG00000021809	rtca	100	51.771	Cyprinodon_variegatus
ENSSTOG00000033099	-	100	64.208	ENSDARG00000002215	rtca	100	64.208	Danio_rerio
ENSSTOG00000033099	-	100	82.289	ENSDNOG00000000456	RTCA	100	82.289	Dasypus_novemcinctus
ENSSTOG00000033099	-	100	81.744	ENSDORG00000005448	Rtca	100	81.744	Dipodomys_ordii
ENSSTOG00000033099	-	91	36.826	FBgn0025630	Rtca	92	36.826	Drosophila_melanogaster
ENSSTOG00000033099	-	94	52.266	ENSEBUG00000008556	rtca	96	52.266	Eptatretus_burgeri
ENSSTOG00000033099	-	100	83.651	ENSEASG00005015926	RTCA	100	83.651	Equus_asinus_asinus
ENSSTOG00000033099	-	100	83.651	ENSECAG00000019831	RTCA	100	83.651	Equus_caballus
ENSSTOG00000033099	-	91	75.723	ENSEEUG00000001165	RTCA	100	75.723	Erinaceus_europaeus
ENSSTOG00000033099	-	99	63.712	ENSELUG00000003741	rtca	99	63.712	Esox_lucius
ENSSTOG00000033099	-	100	83.924	ENSFCAG00000024460	RTCA	100	83.924	Felis_catus
ENSSTOG00000033099	-	93	71.848	ENSFALG00000002443	RTCA	91	71.848	Ficedula_albicollis
ENSSTOG00000033099	-	100	82.834	ENSFDAG00000012070	-	100	82.834	Fukomys_damarensis
ENSSTOG00000033099	-	98	64.543	ENSFDAG00000016084	-	100	64.543	Fukomys_damarensis
ENSSTOG00000033099	-	55	62.679	ENSFHEG00000002868	rtca	88	63.415	Fundulus_heteroclitus
ENSSTOG00000033099	-	100	61.202	ENSGMOG00000013264	rtca	100	61.202	Gadus_morhua
ENSSTOG00000033099	-	100	72.678	ENSGALG00000005277	RTCA	100	72.678	Gallus_gallus
ENSSTOG00000033099	-	100	63.115	ENSGAFG00000011853	rtca	99	63.115	Gambusia_affinis
ENSSTOG00000033099	-	100	61.475	ENSGACG00000013497	rtca	100	61.475	Gasterosteus_aculeatus
ENSSTOG00000033099	-	79	70.748	ENSGAGG00000023306	RTCA	100	70.748	Gopherus_agassizii
ENSSTOG00000033099	-	100	82.561	ENSGGOG00000044018	-	100	82.561	Gorilla_gorilla
ENSSTOG00000033099	-	100	83.106	ENSGGOG00000009546	-	100	84.142	Gorilla_gorilla
ENSSTOG00000033099	-	100	62.022	ENSHBUG00000002114	rtca	99	62.022	Haplochromis_burtoni
ENSSTOG00000033099	-	100	82.289	ENSHGLG00000002617	RTCA	100	82.289	Heterocephalus_glaber_female
ENSSTOG00000033099	-	100	82.289	ENSHGLG00100006056	RTCA	100	82.289	Heterocephalus_glaber_male
ENSSTOG00000033099	-	100	54.918	ENSHCOG00000020628	rtca	89	55.738	Hippocampus_comes
ENSSTOG00000033099	-	100	64.208	ENSIPUG00000024803	rtca	100	64.208	Ictalurus_punctatus
ENSSTOG00000033099	-	100	59.280	ENSJJAG00000016178	Rtca	100	59.280	Jaculus_jaculus
ENSSTOG00000033099	-	100	62.295	ENSKMAG00000006651	rtca	99	62.295	Kryptolebias_marmoratus
ENSSTOG00000033099	-	86	62.461	ENSLBEG00000002448	-	98	62.461	Labrus_bergylta
ENSSTOG00000033099	-	99	61.219	ENSLBEG00000028971	rtca	99	61.219	Labrus_bergylta
ENSSTOG00000033099	-	100	68.033	ENSLACG00000013666	RTCA	100	68.033	Latimeria_chalumnae
ENSSTOG00000033099	-	100	64.208	ENSLOCG00000000093	rtca	99	64.208	Lepisosteus_oculatus
ENSSTOG00000033099	-	100	82.016	ENSLAFG00000001473	RTCA	100	82.016	Loxodonta_africana
ENSSTOG00000033099	-	100	83.379	ENSMFAG00000034132	RTCA	100	83.379	Macaca_fascicularis
ENSSTOG00000033099	-	100	83.379	ENSMMUG00000019105	RTCA	100	83.379	Macaca_mulatta
ENSSTOG00000033099	-	83	84.466	ENSMNEG00000037163	RTCA	100	84.466	Macaca_nemestrina
ENSSTOG00000033099	-	100	67.030	ENSMLEG00000042151	RTCA	100	67.030	Mandrillus_leucophaeus
ENSSTOG00000033099	-	100	63.661	ENSMAMG00000016536	rtca	100	63.661	Mastacembelus_armatus
ENSSTOG00000033099	-	100	62.022	ENSMZEG00005017945	rtca	99	62.022	Maylandia_zebra
ENSSTOG00000033099	-	86	72.555	ENSMGAG00000006892	RTCA	99	72.555	Meleagris_gallopavo
ENSSTOG00000033099	-	100	80.654	ENSMAUG00000008488	Rtca	100	80.654	Mesocricetus_auratus
ENSSTOG00000033099	-	83	85.761	ENSMICG00000008643	RTCA	100	85.761	Microcebus_murinus
ENSSTOG00000033099	-	100	81.199	ENSMOCG00000016660	Rtca	100	81.199	Microtus_ochrogaster
ENSSTOG00000033099	-	83	64.286	ENSMMOG00000007750	rtca	100	64.286	Mola_mola
ENSSTOG00000033099	-	100	78.747	ENSMODG00000003557	RTCA	100	78.747	Monodelphis_domestica
ENSSTOG00000033099	-	100	63.934	ENSMALG00000020844	rtca	100	63.934	Monopterus_albus
ENSSTOG00000033099	-	100	80.109	MGP_CAROLIEiJ_G0025565	Rtca	100	82.394	Mus_caroli
ENSSTOG00000033099	-	100	79.564	ENSMUSG00000000339	Rtca	100	82.394	Mus_musculus
ENSSTOG00000033099	-	100	79.837	MGP_PahariEiJ_G0027011	Rtca	100	81.690	Mus_pahari
ENSSTOG00000033099	-	100	79.837	MGP_SPRETEiJ_G0026515	Rtca	100	81.690	Mus_spretus
ENSSTOG00000033099	-	100	83.924	ENSMPUG00000012119	RTCA	100	83.924	Mustela_putorius_furo
ENSSTOG00000033099	-	100	77.174	ENSMLUG00000009922	RTCA	100	77.174	Myotis_lucifugus
ENSSTOG00000033099	-	100	80.654	ENSNGAG00000011540	Rtca	99	80.654	Nannospalax_galili
ENSSTOG00000033099	-	100	62.022	ENSNBRG00000003062	rtca	99	62.022	Neolamprologus_brichardi
ENSSTOG00000033099	-	100	83.379	ENSNLEG00000031426	RTCA	100	83.379	Nomascus_leucogenys
ENSSTOG00000033099	-	72	79.182	ENSOPRG00000012092	RTCA	71	79.182	Ochotona_princeps
ENSSTOG00000033099	-	95	82.521	ENSODEG00000006990	RTCA	96	82.621	Octodon_degus
ENSSTOG00000033099	-	100	61.749	ENSONIG00000007753	rtca	99	61.749	Oreochromis_niloticus
ENSSTOG00000033099	-	86	77.918	ENSOANG00000012055	RTCA	98	77.918	Ornithorhynchus_anatinus
ENSSTOG00000033099	-	100	84.741	ENSOCUG00000014247	RTCA	100	84.741	Oryctolagus_cuniculus
ENSSTOG00000033099	-	100	62.842	ENSORLG00000013605	rtca	100	62.842	Oryzias_latipes
ENSSTOG00000033099	-	100	62.842	ENSORLG00020001904	rtca	100	62.842	Oryzias_latipes_hni
ENSSTOG00000033099	-	100	62.842	ENSORLG00015021064	rtca	100	62.842	Oryzias_latipes_hsok
ENSSTOG00000033099	-	100	63.115	ENSOMEG00000000756	rtca	100	63.115	Oryzias_melastigma
ENSSTOG00000033099	-	100	74.932	ENSOGAG00000005627	RTCA	100	74.932	Otolemur_garnettii
ENSSTOG00000033099	-	86	83.861	ENSOARG00000018122	RTCA	100	83.861	Ovis_aries
ENSSTOG00000033099	-	100	80.263	ENSPPAG00000035119	RTCA	100	84.142	Pan_paniscus
ENSSTOG00000033099	-	100	83.924	ENSPPRG00000000350	RTCA	100	83.924	Panthera_pardus
ENSSTOG00000033099	-	100	83.651	ENSPTIG00000012816	RTCA	100	83.651	Panthera_tigris_altaica
ENSSTOG00000033099	-	100	80.526	ENSPTRG00000001004	RTCA	100	84.466	Pan_troglodytes
ENSSTOG00000033099	-	100	83.379	ENSPANG00000000346	RTCA	100	83.379	Papio_anubis
ENSSTOG00000033099	-	100	64.754	ENSPKIG00000001653	rtca	100	64.754	Paramormyrops_kingsleyae
ENSSTOG00000033099	-	100	73.224	ENSPSIG00000011408	RTCA	100	73.224	Pelodiscus_sinensis
ENSSTOG00000033099	-	100	80.381	ENSPEMG00000018582	Rtca	100	80.381	Peromyscus_maniculatus_bairdii
ENSSTOG00000033099	-	99	52.762	ENSPMAG00000009110	rtca	99	52.329	Petromyzon_marinus
ENSSTOG00000033099	-	100	79.019	ENSPCIG00000007684	RTCA	100	79.019	Phascolarctos_cinereus
ENSSTOG00000033099	-	100	63.661	ENSPFOG00000004824	rtca	100	63.661	Poecilia_formosa
ENSSTOG00000033099	-	100	63.661	ENSPLAG00000011753	rtca	99	63.661	Poecilia_latipinna
ENSSTOG00000033099	-	100	63.661	ENSPMEG00000020469	rtca	99	63.661	Poecilia_mexicana
ENSSTOG00000033099	-	100	64.481	ENSPREG00000001365	rtca	99	64.481	Poecilia_reticulata
ENSSTOG00000033099	-	100	83.106	ENSPPYG00000001115	RTCA	100	83.106	Pongo_abelii
ENSSTOG00000033099	-	100	79.292	ENSPCAG00000005076	RTCA	100	79.292	Procavia_capensis
ENSSTOG00000033099	-	100	85.014	ENSPCOG00000005603	RTCA	100	85.014	Propithecus_coquereli
ENSSTOG00000033099	-	100	80.739	ENSPVAG00000009478	RTCA	100	80.739	Pteropus_vampyrus
ENSSTOG00000033099	-	100	62.022	ENSPNYG00000004722	rtca	99	62.022	Pundamilia_nyererei
ENSSTOG00000033099	-	100	63.115	ENSPNAG00000022270	rtca	100	63.115	Pygocentrus_nattereri
ENSSTOG00000033099	-	100	80.381	ENSRNOG00000014575	Rtca	100	80.381	Rattus_norvegicus
ENSSTOG00000033099	-	100	80.000	ENSRBIG00000041180	RTCA	100	83.495	Rhinopithecus_bieti
ENSSTOG00000033099	-	100	82.561	ENSRROG00000024929	RTCA	100	82.561	Rhinopithecus_roxellana
ENSSTOG00000033099	-	100	82.016	ENSSBOG00000028626	RTCA	100	82.016	Saimiri_boliviensis_boliviensis
ENSSTOG00000033099	-	100	79.292	ENSSHAG00000001758	RTCA	100	79.292	Sarcophilus_harrisii
ENSSTOG00000033099	-	98	61.389	ENSSMAG00000014680	rtca	97	61.389	Scophthalmus_maximus
ENSSTOG00000033099	-	98	62.222	ENSSDUG00000015585	rtca	97	62.222	Seriola_dumerili
ENSSTOG00000033099	-	97	61.798	ENSSLDG00000018985	rtca	96	61.798	Seriola_lalandi_dorsalis
ENSSTOG00000033099	-	86	77.603	ENSSARG00000013993	RTCA	100	77.603	Sorex_araneus
ENSSTOG00000033099	-	100	62.022	ENSSPAG00000011938	rtca	99	62.022	Stegastes_partitus
ENSSTOG00000033099	-	100	83.106	ENSSSCG00000006865	RTCA	100	83.106	Sus_scrofa
ENSSTOG00000033099	-	100	73.497	ENSTGUG00000005154	RTCA	100	73.497	Taeniopygia_guttata
ENSSTOG00000033099	-	100	62.295	ENSTRUG00000008799	rtca	100	62.295	Takifugu_rubripes
ENSSTOG00000033099	-	100	63.388	ENSTNIG00000004725	rtca	100	63.388	Tetraodon_nigroviridis
ENSSTOG00000033099	-	59	71.171	ENSTBEG00000000943	RTCA	82	52.101	Tupaia_belangeri
ENSSTOG00000033099	-	100	79.211	ENSTTRG00000015327	RTCA	100	79.211	Tursiops_truncatus
ENSSTOG00000033099	-	94	81.686	ENSUAMG00000017265	RTCA	96	81.686	Ursus_americanus
ENSSTOG00000033099	-	100	83.106	ENSUMAG00000007881	RTCA	100	83.106	Ursus_maritimus
ENSSTOG00000033099	-	87	76.087	ENSVPAG00000001039	RTCA	85	76.087	Vicugna_pacos
ENSSTOG00000033099	-	100	83.379	ENSVVUG00000022041	RTCA	68	83.379	Vulpes_vulpes
ENSSTOG00000033099	-	99	55.313	ENSXETG00000031661	RTCA	99	55.313	Xenopus_tropicalis
ENSSTOG00000033099	-	100	56.620	ENSXCOG00000008002	rtca	100	56.620	Xiphophorus_couchianus
ENSSTOG00000033099	-	100	63.388	ENSXMAG00000005482	rtca	99	63.388	Xiphophorus_maculatus