EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000033183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 1123 bases
Position: chrJH393286.1:23188850-23189972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000025535	La	PF05383.17	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032459	-	702	-	ENSSTOP00000025535	233 (aa)	-	A0A287CW33

Gene Model

Click here to download ENSSTOG00000033183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000033183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000033183	-	98	64.808	ENSSTOG00000021917	-	89	64.808
ENSSTOG00000033183	-	97	76.190	ENSSTOG00000008596	-	90	78.462
ENSSTOG00000033183	-	97	59.206	ENSSTOG00000034510	-	80	61.290

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000033183	-	95	75.403	ENSG00000138709	LARP1B	91	66.340	Homo_sapiens
ENSSTOG00000033183	-	100	66.993	ENSAMEG00000002748	LARP1B	91	65.686	Ailuropoda_melanoleuca
ENSSTOG00000033183	-	89	74.459	ENSANAG00000034618	LARP1B	72	74.459	Aotus_nancymaae
ENSSTOG00000033183	-	84	83.249	ENSBTAG00000012135	LARP1B	51	68.635	Bos_taurus
ENSSTOG00000033183	-	97	66.443	ENSCJAG00000003338	LARP1B	91	66.993	Callithrix_jacchus
ENSSTOG00000033183	-	100	77.992	ENSCAFG00020018899	LARP1B	90	77.992	Canis_lupus_dingo
ENSSTOG00000033183	-	100	75.769	ENSCHIG00000023144	LARP1B	90	75.385	Capra_hircus
ENSSTOG00000033183	-	96	71.600	ENSTSYG00000002037	-	89	72.481	Carlito_syrichta
ENSSTOG00000033183	-	67	79.412	ENSCPOG00000034668	-	87	54.826	Cavia_porcellus
ENSSTOG00000033183	-	96	67.003	ENSCCAG00000021948	LARP1B	91	67.541	Cebus_capucinus
ENSSTOG00000033183	-	97	62.963	ENSCATG00000013541	LARP1B	91	63.934	Cercocebus_atys
ENSSTOG00000033183	-	97	72.908	ENSCLAG00000006448	-	90	73.745	Chinchilla_lanigera
ENSSTOG00000033183	-	97	76.494	ENSCANG00000026958	LARP1B	90	77.220	Colobus_angolensis_palliatus
ENSSTOG00000033183	-	97	75.697	ENSCGRG00001004660	-	90	76.062	Cricetulus_griseus_chok1gshd
ENSSTOG00000033183	-	97	75.299	ENSCGRG00000001914	-	90	75.676	Cricetulus_griseus_crigri
ENSSTOG00000033183	-	93	69.663	ENSDNOG00000018765	-	54	70.545	Dasypus_novemcinctus
ENSSTOG00000033183	-	99	79.070	ENSEASG00005018106	LARP1B	89	79.070	Equus_asinus_asinus
ENSSTOG00000033183	-	100	66.667	ENSFCAG00000014650	-	91	66.667	Felis_catus
ENSSTOG00000033183	-	97	65.436	ENSGGOG00000015900	LARP1B	91	66.340	Gorilla_gorilla
ENSSTOG00000033183	-	91	62.302	ENSHGLG00000013922	-	79	61.923	Heterocephalus_glaber_female
ENSSTOG00000033183	-	96	70.079	ENSHGLG00000006728	-	89	70.722	Heterocephalus_glaber_female
ENSSTOG00000033183	-	96	70.800	ENSHGLG00100014041	-	85	71.042	Heterocephalus_glaber_male
ENSSTOG00000033183	-	91	62.302	ENSHGLG00100016491	-	79	61.923	Heterocephalus_glaber_male
ENSSTOG00000033183	-	96	73.600	ENSJJAG00000022360	Larp1b	90	74.131	Jaculus_jaculus
ENSSTOG00000033183	-	90	58.015	ENSLACG00000015247	LARP1B	69	57.407	Latimeria_chalumnae
ENSSTOG00000033183	-	91	73.282	ENSLAFG00000008473	-	91	68.078	Loxodonta_africana
ENSSTOG00000033183	-	97	66.443	ENSMFAG00000002218	LARP1B	91	67.320	Macaca_fascicularis
ENSSTOG00000033183	-	97	51.807	ENSMFAG00000003306	-	82	53.307	Macaca_fascicularis
ENSSTOG00000033183	-	97	66.443	ENSMMUG00000021347	LARP1B	91	67.320	Macaca_mulatta
ENSSTOG00000033183	-	66	76.471	ENSMNEG00000027747	-	82	53.307	Macaca_nemestrina
ENSSTOG00000033183	-	97	74.900	ENSMAUG00000007879	-	90	75.290	Mesocricetus_auratus
ENSSTOG00000033183	-	96	55.056	ENSMICG00000028052	-	52	55.431	Microcebus_murinus
ENSSTOG00000033183	-	97	67.785	ENSMICG00000036111	LARP1B	91	68.627	Microcebus_murinus
ENSSTOG00000033183	-	93	74.439	ENSMICG00000037883	-	71	75.325	Microcebus_murinus
ENSSTOG00000033183	-	84	81.726	ENSMOCG00000001490	Larp1b	84	73.391	Microtus_ochrogaster
ENSSTOG00000033183	-	96	73.600	MGP_CAROLIEiJ_G0024962	Larp1b	90	74.131	Mus_caroli
ENSSTOG00000033183	-	96	74.400	ENSMUSG00000025762	Larp1b	90	74.903	Mus_musculus
ENSSTOG00000033183	-	96	74.400	MGP_PahariEiJ_G0026403	Larp1b	90	74.903	Mus_pahari
ENSSTOG00000033183	-	96	74.400	MGP_SPRETEiJ_G0025897	Larp1b	90	74.903	Mus_spretus
ENSSTOG00000033183	-	97	65.772	ENSNLEG00000013819	LARP1B	91	66.667	Nomascus_leucogenys
ENSSTOG00000033183	-	100	72.201	ENSODEG00000001292	-	90	72.201	Octodon_degus
ENSSTOG00000033183	-	97	65.101	ENSPPAG00000030439	LARP1B	91	66.013	Pan_paniscus
ENSSTOG00000033183	-	100	66.667	ENSPPRG00000002743	-	91	66.667	Panthera_pardus
ENSSTOG00000033183	-	100	66.667	ENSPTIG00000011225	LARP1B	91	66.667	Panthera_tigris_altaica
ENSSTOG00000033183	-	97	65.101	ENSPTRG00000016437	LARP1B	91	66.013	Pan_troglodytes
ENSSTOG00000033183	-	97	66.107	ENSPANG00000012488	LARP1B	91	66.993	Papio_anubis
ENSSTOG00000033183	-	94	79.911	ENSPCIG00000026516	LARP1B	66	79.911	Phascolarctos_cinereus
ENSSTOG00000033183	-	78	58.152	ENSPREG00000005955	-	60	56.853	Poecilia_reticulata
ENSSTOG00000033183	-	97	67.114	ENSPCOG00000021874	LARP1B	91	67.974	Propithecus_coquereli
ENSSTOG00000033183	-	96	65.320	ENSRNOG00000038366	Larp1b	91	66.013	Rattus_norvegicus
ENSSTOG00000033183	-	99	66.557	ENSRBIG00000039982	-	93	66.557	Rhinopithecus_bieti
ENSSTOG00000033183	-	97	61.905	ENSRBIG00000038568	-	83	62.667	Rhinopithecus_bieti
ENSSTOG00000033183	-	97	66.107	ENSRROG00000030771	LARP1B	91	66.993	Rhinopithecus_roxellana
ENSSTOG00000033183	-	97	70.800	ENSRROG00000038525	-	86	71.538	Rhinopithecus_roxellana
ENSSTOG00000033183	-	99	66.337	ENSSSCG00000034280	LARP1B	58	64.356	Sus_scrofa
ENSSTOG00000033183	-	82	51.163	ENSSSCG00000040491	-	84	51.389	Sus_scrofa
ENSSTOG00000033183	-	100	66.148	ENSUAMG00000016938	-	89	64.591	Ursus_americanus
ENSSTOG00000033183	-	99	66.667	ENSVVUG00000011307	LARP1B	59	66.667	Vulpes_vulpes